Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 231
originally caused by:
 Started by upstream project "Trigger" build number 256
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins64473862959410022.sh
+ '[' micromanager = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_36287_merge_ci -v /uod/idr/repos/curated/micromanager:/data -v /uod/idr-scratch/merge-ci/curated/micromanager:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 03:01:18,309 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 03:01:18,310 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
   [testng] 03:01:18,310 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:01:18,311 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:01:18,312 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 03:01:18,312 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 03:01:18,313 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 03:01:18,313 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:01:18,313 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:01:18,314 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 03:01:18,314 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 03:01:18,314 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 03:01:18,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 03:01:18,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 03:01:18,529 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 03:01:18,529 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 03:01:18,535 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 03:01:18,535 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 03:01:18,535 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 03:01:18,536 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 03:01:18,536 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
   [testng] 03:01:18,536 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
   [testng] 03:01:18,536 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 223 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-10-22 03:01:18,547] [main] java.version = 11.0.16
   [testng] 03:01:18,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 03:01:18,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:01:18,606 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-22_03-01-18.log]
   [testng] 03:01:18,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
   [testng] [2024-10-22 03:01:18,610] [main] testng.directory = /data
   [testng] [2024-10-22 03:01:18,610] [main] testng.configDirectory = /config
   [testng] [2024-10-22 03:01:18,621] [main] testng.multiplier = 1.0
   [testng] [2024-10-22 03:01:18,622] [main] testng.in-memory = false
   [testng] [2024-10-22 03:01:18,622] [main] testng.allow-missing = false
   [testng] [2024-10-22 03:01:18,622] [main] user.language = en
   [testng] [2024-10-22 03:01:18,622] [main] user.country = ${user.country}
   [testng] [2024-10-22 03:01:18,623] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-10-22 03:02:32,923] [main] ----------------------------------------
   [testng] [2024-10-22 03:02:32,924] [main] Total files: 1686
   [testng] [2024-10-22 03:02:32,924] [main] Scan time: 74.3 s (44 ms/file)
   [testng] [2024-10-22 03:02:32,924] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 49 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-10-22 03:10:02,144] [pool-1-thread-1] Initializing /data/pr-3253/img_000000000__000.tif: 
   [testng] 03:10:02,145 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 03:10:02,145 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:10:02,147 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-22_03-10-02.log]
   [testng] 03:10:02,148 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e0a2451 - End of configuration.
   [testng] [2024-10-22 03:10:02,893] [pool-1-thread-12] Initializing /data/nico/test2/img_000000000_Cy5_000.tif: 
   [testng] 03:10:02,893 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 03:10:02,893 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:10:02,894 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-22_03-10-02.log]
   [testng] 03:10:02,894 |-INFO in ch.qos.logback.core.sift.SiftProcessor@326a0321 - End of configuration.
   [testng] [2024-10-22 03:10:03,946] [pool-1-thread-11] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_009.tif: 
   [testng] 03:10:03,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 03:10:03,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:10:03,947 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-22_03-10-03.log]
   [testng] 03:10:03,947 |-INFO in ch.qos.logback.core.sift.SiftProcessor@447baf6e - End of configuration.
   [testng] [2024-10-22 03:10:07,195] [pool-1-thread-11] Used files list does not include base file
   [testng] [2024-10-22 03:10:07,198] [pool-1-thread-10] Initializing /data/nico/MM_test_0/img_0_Cy5_0.tif: 
   [testng] 03:10:07,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 03:10:07,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:10:07,199 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-22_03-10-07.log]
   [testng] 03:10:07,199 |-INFO in ch.qos.logback.core.sift.SiftProcessor@639c6e63 - End of configuration.
   [testng] [2024-10-22 03:10:08,630] [pool-1-thread-9] Initializing /data/eik/1-Pos_000_000/img_000000000_Blue_002.tif: 
   [testng] 03:10:08,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 03:10:08,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:10:08,632 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-22_03-10-08.log]
   [testng] 03:10:08,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4848ef5e - End of configuration.
   [testng] [2024-10-22 03:10:11,923] [pool-1-thread-8] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_007.tif: 
   [testng] 03:10:11,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 03:10:11,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:10:11,924 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-22_03-10-11.log]
   [testng] 03:10:11,924 |-INFO in ch.qos.logback.core.sift.SiftProcessor@432cc1bc - End of configuration.
   [testng] [2024-10-22 03:10:16,151] [pool-1-thread-8] Used files list does not include base file
   [testng] [2024-10-22 03:10:16,154] [pool-1-thread-7] Initializing /data/nico/S2-GFP-Histone-Cherry-tub_9_Great2/metadata.txt: 
   [testng] 03:10:16,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 03:10:16,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:10:16,155 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-22_03-10-16.log]
   [testng] 03:10:16,155 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26437fb8 - End of configuration.
   [testng] [2024-10-22 03:10:50,354] [pool-1-thread-6] Initializing /data/pr-3229/1.4-large-acq-take-2_1_MMStack_Pos0_metadata.txt: 
   [testng] 03:10:50,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 03:10:50,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:10:50,355 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-22_03-10-50.log]
   [testng] 03:10:50,356 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1092cdd8 - End of configuration.
   [testng] [2024-10-22 03:13:11,758] [pool-1-thread-5] Initializing /data/public/1.4.16/serge/Pos0/img_000000000_00-BF0_000.tif: 
   [testng] 03:13:11,758 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 03:13:11,758 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:13:11,759 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-22_03-13-11.log]
   [testng] 03:13:11,760 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46ec6750 - End of configuration.
   [testng] [2024-10-22 03:13:14,294] [pool-1-thread-4] Initializing /data/kally/img_000000000_Brightfield_000.tif: 
   [testng] 03:13:14,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 03:13:14,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:13:14,295 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-22_03-13-14.log]
   [testng] 03:13:14,295 |-INFO in ch.qos.logback.core.sift.SiftProcessor@203e7e79 - End of configuration.
   [testng] [2024-10-22 03:13:19,931] [pool-1-thread-3] Initializing /data/eric/GFP-Aladin mCh-Tub_2/Acqusition.xml: 
   [testng] 03:13:19,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 03:13:19,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:13:19,932 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-22_03-13-19.log]
   [testng] 03:13:19,933 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f494cb2 - End of configuration.
   [testng] [2024-10-22 03:13:22,156] [pool-1-thread-2] Initializing /data/david/trial 2 part 3 40x_0/Acqusition.xml: 
   [testng] 03:13:22,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 03:13:22,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:13:22,157 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-22_03-13-22.log]
   [testng] 03:13:22,157 |-INFO in ch.qos.logback.core.sift.SiftProcessor@197ab790 - End of configuration.
   [testng] [2024-10-22 03:13:49,558] [pool-1-thread-1] Initializing /data/nico/Untitled_4_multi_file/img_000000000_gfpFast_000.tif: 
   [testng] [2024-10-22 03:14:37,937] [pool-1-thread-12] Initializing /data/david/res test/res test.tif: 
   [testng] [2024-10-22 03:14:53,455] [pool-1-thread-12] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_006.tif: 
   [testng] [2024-10-22 03:14:59,545] [pool-1-thread-12] Used files list does not include base file
   [testng] [2024-10-22 03:15:06,437] [pool-1-thread-2] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_001_000_metadata.txt: 
   [testng] [2024-10-22 03:15:26,752] [pool-1-thread-2] Initializing /data/public/1.4.22/thomas/test/test_sep/Pos0/img_000000000_FITC_000.tif: 
   [testng] [2024-10-22 03:15:41,889] [pool-1-thread-10] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_001_001_metadata.txt: 
   [testng] [2024-10-22 03:16:01,450] [pool-1-thread-10] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_000_000_metadata.txt: 
   [testng] [2024-10-22 03:16:15,702] [pool-1-thread-9] Initializing /data/scott/EMoffchanfurst2Time_0/img_000000000_491_000.tif: 
   [testng] [2024-10-22 03:16:22,181] [pool-1-thread-2] Initializing /data/scott/EMonchanfurst2Time_0/img_000000000_491_000.tif: 
   [testng] [2024-10-22 03:16:26,588] [pool-1-thread-10] Initializing /data/david/img_000000000_white_000.tif: 
   [testng] [2024-10-22 03:16:54,238] [pool-1-thread-5] Initializing /data/public/1.4.16/serge/Pos4/img_000000000_00-BF0_000.tif: 
   [testng] [2024-10-22 03:17:02,361] [pool-1-thread-3] Initializing /data/public/1.4.22/thomas/test/test_stack/test_stack_MMStack_Pos0_metadata.txt: 
   [testng] [2024-10-22 03:17:04,290] [pool-1-thread-10] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_008.tif: 
   [testng] [2024-10-22 03:17:10,060] [pool-1-thread-10] Used files list does not include base file
   [testng] [2024-10-22 03:17:23,625] [pool-1-thread-3] Initializing /data/eric/GFP-Aladin mCh-Tub_3/Acqusition.xml: 
   [testng] [2024-10-22 03:18:19,258] [pool-1-thread-9] Initializing /data/stanislav/s105-GFP-_0/img_000000000_GFP_000.tif: 
   [testng] [2024-10-22 03:18:26,509] [pool-1-thread-2] Initializing /data/public/1.4.16/serge/Pos2/img_000000000_00-BF0_000.tif: 
   [testng] [2024-10-22 03:18:57,453] [pool-1-thread-1] Initializing /data/public/1.4.23/jens/fucci_GFP-geminin_RFP-cdt1_2_MMStack_Pos0_metadata.txt: 
   [testng] [2024-10-22 03:19:14,634] [pool-1-thread-1] Initializing /data/public/1.4.16/serge/Pos5/img_000000000_00-BF0_000.tif: 
   [testng] [2024-10-22 03:19:41,535] [pool-1-thread-5] Initializing /data/eric/GFP-Aladin mCh-Tub_1/Acqusition.xml: 
   [testng] [2024-10-22 03:20:28,552] [pool-1-thread-4] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_006.tif: 
   [testng] [2024-10-22 03:20:32,587] [pool-1-thread-4] Used files list does not include base file
   [testng] [2024-10-22 03:20:32,621] [pool-1-thread-9] Initializing /data/scott/EMoffslicefurst2Time_0/img_000000000_491_000.tif: 
   [testng] [2024-10-22 03:20:49,101] [pool-1-thread-2] Initializing /data/eric/GFP-Aladin mCh-Tub_4/Acqusition.xml: 
   [testng] [2024-10-22 03:21:31,443] [pool-1-thread-3] Initializing /data/eric/GFP-Aladin mCh-Tub_5/Acqusition.xml: 
   [testng] [2024-10-22 03:21:55,199] [pool-1-thread-1] Initializing /data/eric/GFP-Aladin mCh-Tub_0/Acqusition.xml: 
   [testng] [2024-10-22 03:22:07,097] [pool-1-thread-9] Initializing /data/public/1.4.22/sebastien/Test_Dataset_MultiPosition_Stack_1_MMStack_Pos0_metadata.txt: 
   [testng] [2024-10-22 03:22:36,008] [pool-1-thread-5] Initializing /data/qa-4984/img_000000000__000.tif: 
   [testng] [2024-10-22 03:23:00,167] [pool-1-thread-5] Initializing /data/nico/test_1/Acqusition.xml: 
   [testng] [2024-10-22 03:24:56,106] [pool-1-thread-9] Initializing /data/public/1.4.22/thomas/test/test2_sep/Pos0/metadata.txt: 
   [testng] [2024-10-22 03:25:29,354] [pool-1-thread-5] Initializing /data/scott/EMonslicefurst2Time_0/img_000000000_491_000.tif: 
   [testng] [2024-10-22 03:25:34,717] [pool-1-thread-9] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_007.tif: 
   [testng] [2024-10-22 03:25:39,655] [pool-1-thread-9] Used files list does not include base file
   [testng] [2024-10-22 03:26:11,597] [pool-1-thread-8] Initializing /data/nico/test-ASI-Z_181/img_000000004_Cy3_009.tif: 
   [testng] [2024-10-22 03:26:16,663] [pool-1-thread-8] Used files list does not include base file
   [testng] [2024-10-22 03:26:16,665] [pool-1-thread-11] Initializing /data/public/1.4.22/thomas/test/test2_stack/MMStack_Pos0_metadata.txt: 
   [testng] [2024-10-22 03:26:37,603] [pool-1-thread-11] Initializing /data/colin/20121205_H_rel_3c_0nm_1/img_000000000_Cy5_000.tif: 
   [testng] [2024-10-22 03:27:29,384] [pool-1-thread-5] Initializing /data/public/1.4.16/serge/Pos3/img_000000000_00-BF0_000.tif: 
   [testng] [2024-10-22 03:27:31,630] [pool-1-thread-12] Initializing /data/qa-17040/hyper2.0_1_MMStack_1-Pos_000_001_metadata.txt: 
   [testng] [2024-10-22 03:27:45,859] [pool-1-thread-12] Initializing /data/nico/test-ASI-Z_181/img_000000004_FITC_008.tif: 
   [testng] [2024-10-22 03:27:49,762] [pool-1-thread-12] Used files list does not include base file
   [testng] [2024-10-22 03:28:29,895] [pool-1-thread-1] Initializing /data/public/1.4.16/serge/Pos1/img_000000000_00-BF0_000.tif: 
   [testng] 04:13:25,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 04:13:25,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:13:25,562 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-22_04-13-25.log]
   [testng] 04:13:25,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35940766 - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 2597, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 72 minutes 10 seconds
Finished: SUCCESS