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Started by upstream project "BIOFORMATS-test-repo" build number 231 originally caused by: Started by upstream project "Trigger" build number 256 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins9418167028511234589.sh + '[' ome-xml = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_36335_merge_ci -v /uod/idr/repos/curated/ome-xml:/data -v /uod/idr-scratch/merge-ci/curated/ome-xml:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 04:50:28,742 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 04:50:28,743 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 04:50:28,743 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:50:28,744 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:50:28,745 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:50:28,745 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:50:28,745 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:50:28,745 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:50:28,746 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:50:28,746 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:50:28,747 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:50:28,747 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:50:28,910 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:50:28,910 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:50:28,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:50:28,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:50:28,938 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:50:28,938 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:50:28,938 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:50:28,939 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:50:28,939 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 04:50:28,939 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 04:50:28,939 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 193 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-22 04:50:28,948] [main] java.version = 11.0.16 [testng] 04:50:28,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:50:28,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:50:28,992 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-22_04-50-28.log] [testng] 04:50:28,994 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-22 04:50:28,996] [main] testng.directory = /data [testng] [2024-10-22 04:50:28,996] [main] testng.configDirectory = /config [testng] [2024-10-22 04:50:29,005] [main] testng.multiplier = 1.0 [testng] [2024-10-22 04:50:29,006] [main] testng.in-memory = false [testng] [2024-10-22 04:50:29,006] [main] testng.allow-missing = false [testng] [2024-10-22 04:50:29,007] [main] user.language = en [testng] [2024-10-22 04:50:29,007] [main] user.country = ${user.country} [testng] [2024-10-22 04:50:29,007] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-22 04:50:38,033] [main] ---------------------------------------- [testng] [2024-10-22 04:50:38,033] [main] Total files: 203 [testng] [2024-10-22 04:50:38,033] [main] Scan time: 9.026 s (44 ms/file) [testng] [2024-10-22 04:50:38,033] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 202 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-22 04:52:39,188] [pool-1-thread-1] Initializing /data/public/2010-06/multi-channel-time-series.ome.xml: [testng] 04:52:39,189 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:52:39,189 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:39,191 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-22_04-52-39.log] [testng] 04:52:39,192 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40aa08ff - End of configuration. [testng] [2024-10-22 04:52:39,900] [pool-1-thread-12] Initializing /data/public/2013-06/spim.ome.xml: [testng] 04:52:39,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:52:39,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:39,901 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-22_04-52-39.log] [testng] 04:52:39,901 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2467e6e7 - End of configuration. [testng] [2024-10-22 04:52:41,052] [pool-1-thread-11] Initializing /data/public/2010-06/ROI.ome.xml: [testng] 04:52:41,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:52:41,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:41,053 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-22_04-52-41.log] [testng] 04:52:41,053 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59da29fc - End of configuration. [testng] [2024-10-22 04:52:41,340] [pool-1-thread-10] Initializing /data/public/2015-01/two-screens-two-plates-four-wells.ome.xml: [testng] 04:52:41,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:52:41,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:41,341 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-22_04-52-41.log] [testng] 04:52:41,341 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d421cf9 - End of configuration. [testng] [2024-10-22 04:52:41,669] [pool-1-thread-9] Initializing /data/samples/Sample-2008_02.ome: [testng] 04:52:41,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:52:41,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:41,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-22_04-52-41.log] [testng] 04:52:41,670 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7df62d7c - End of configuration. [testng] [2024-10-22 04:52:42,131] [pool-1-thread-8] Initializing /data/public/2016-06/mapannotation.ome.xml: [testng] 04:52:42,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:52:42,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:42,132 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-22_04-52-42.log] [testng] 04:52:42,132 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39d62596 - End of configuration. [testng] [2024-10-22 04:52:42,452] [pool-1-thread-7] Initializing /data/public/2008-09/multi-channel-z-series-time-series.ome.xml: [testng] 04:52:42,452 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:52:42,452 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:42,453 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-22_04-52-42.log] [testng] 04:52:42,453 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44325eba - End of configuration. [testng] [2024-10-22 04:52:42,784] [pool-1-thread-6] Initializing /data/public/2013-06/tagannotation.ome.xml: [testng] 04:52:42,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:52:42,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:42,785 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-22_04-52-42.log] [testng] 04:52:42,785 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2880890b - End of configuration. [testng] [2024-10-22 04:52:43,077] [pool-1-thread-5] Initializing /data/public/2011-06/instrument.ome.xml: [testng] 04:52:43,077 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:52:43,077 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:43,078 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-22_04-52-43.log] [testng] 04:52:43,078 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e402f12 - End of configuration. [testng] [2024-10-22 04:52:43,388] [pool-1-thread-4] Initializing /data/public/2015-01/multi-channel-z-series.ome.xml: [testng] 04:52:43,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:52:43,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:43,389 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-22_04-52-43.log] [testng] 04:52:43,389 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c1f1647 - End of configuration. [testng] [2024-10-22 04:52:43,668] [pool-1-thread-3] Initializing /data/public/2011-06/no-date.ome.xml: [testng] 04:52:43,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:52:43,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:43,669 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-22_04-52-43.log] [testng] 04:52:43,669 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b3441da - End of configuration. [testng] [2024-10-22 04:52:43,944] [pool-1-thread-2] Initializing /data/public/2013-06/multi-channel-z-series-time-series.ome.xml: [testng] 04:52:43,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:52:43,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:43,945 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-22_04-52-43.log] [testng] 04:52:43,945 |-INFO in ch.qos.logback.core.sift.SiftProcessor@662184ac - End of configuration. [testng] [2024-10-22 04:52:48,313] [pool-1-thread-8] Initializing /data/public/2010-04/instrument.ome.xml: [testng] [2024-10-22 04:52:48,655] [pool-1-thread-6] Initializing /data/public/2015-01/minimum-specification.ome.xml: [testng] [2024-10-22 04:52:48,947] [pool-1-thread-3] Initializing /data/public/2016-06/commentannotation.ome.xml: [testng] [2024-10-22 04:52:49,229] [pool-1-thread-1] Initializing /data/public/2012-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-10-22 04:52:49,547] [pool-1-thread-11] Initializing /data/public/2010-04/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-10-22 04:52:49,876] [pool-1-thread-4] Initializing /data/public/2015-01/filter.ome.xml: [testng] [2024-10-22 04:52:50,158] [pool-1-thread-5] Initializing /data/public/2011-06/transformations-upgrade.ome.xml: [testng] [2024-10-22 04:52:50,494] [pool-1-thread-2] Initializing /data/public/2009-09/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-10-22 04:52:50,879] [pool-1-thread-7] Initializing /data/public/2016-06/hcs.ome.xml: [testng] [2024-10-22 04:52:51,153] [pool-1-thread-12] Initializing /data/public/2013-06/multi-channel-time-series.ome.xml: [testng] [2024-10-22 04:52:51,568] [pool-1-thread-9] Initializing /data/public/2015-01/z-series.ome.xml: [testng] [2024-10-22 04:52:52,149] [pool-1-thread-10] Initializing /data/public/2008-09/multi-channel-time-series.ome.xml: [testng] [2024-10-22 04:52:55,808] [pool-1-thread-3] Initializing /data/public/2010-06/no-date.ome.xml: [testng] [2024-10-22 04:52:56,134] [pool-1-thread-4] Initializing /data/samples/TAABA.ome: [testng] [2024-10-22 04:52:56,835] [pool-1-thread-6] Initializing /data/public/2010-04/metadata-only.ome.xml: [testng] [2024-10-22 04:52:57,155] [pool-1-thread-7] Initializing /data/curtis/all-black.ome: [testng] [2024-10-22 04:52:57,487] [pool-1-thread-8] Initializing /data/johannes/20100625_W3_Ppac_8.ome: [testng] [2024-10-22 04:52:57,804] [pool-1-thread-2] Initializing /data/public/2016-06/timestampannotation-posix-only.ome.xml: [testng] [2024-10-22 04:52:58,072] [pool-1-thread-1] Initializing /data/public/2016-06/multi-channel.ome.xml: [testng] [2024-10-22 04:52:58,361] [pool-1-thread-5] Initializing /data/samples/Antarctic_Diatom_D3D_01.ome: [testng] [2024-10-22 04:52:59,010] [pool-1-thread-11] Initializing /data/public/2010-04/z-series-time-series.ome.xml: [testng] [2024-10-22 04:52:59,305] [pool-1-thread-12] Initializing /data/public/2010-06/multi-channel.ome.xml: [testng] [2024-10-22 04:52:59,837] [pool-1-thread-9] Initializing /data/public/2010-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-10-22 04:53:00,273] [pool-1-thread-10] Initializing /data/public/2015-01/ROI.ome.xml: [testng] [2024-10-22 04:53:03,076] [pool-1-thread-6] Initializing /data/public/2010-06/metadata-only.ome.xml: [testng] [2024-10-22 04:53:03,415] [pool-1-thread-3] Initializing /data/public/2011-06/metadata-only.ome.xml: [testng] [2024-10-22 04:53:03,705] [pool-1-thread-12] Initializing /data/public/2011-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-10-22 04:53:04,023] [pool-1-thread-1] Initializing /data/public/2016-06/transformations-downgrade.ome.xml: [testng] [2024-10-22 04:53:04,288] [pool-1-thread-7] Initializing /data/public/2011-06/spim.ome.xml: [testng] [2024-10-22 04:53:04,758] [pool-1-thread-8] Initializing /data/public/2011-06/multi-channel.ome.xml: [testng] [2024-10-22 04:53:05,068] [pool-1-thread-2] Initializing /data/curtis/black6-7.tif: [testng] [2024-10-22 04:53:06,733] [pool-1-thread-11] Initializing /data/public/2013-06/filter.ome.xml: [testng] [2024-10-22 04:53:07,855] [pool-1-thread-5] Initializing /data/public/2015-01/mapannotation.ome.xml: [testng] [2024-10-22 04:53:08,546] [pool-1-thread-10] Initializing /data/public/2010-04/z-series.ome.xml: [testng] [2024-10-22 04:53:09,075] [pool-1-thread-9] Initializing /data/public/2010-06/instrument.ome.xml: [testng] [2024-10-22 04:53:10,102] [pool-1-thread-4] Initializing /data/public/2008-09/time-series.ome.xml: [testng] [2024-10-22 04:53:12,013] [pool-1-thread-6] Initializing /data/public/2016-06/instrument-units-alternate.ome.xml: [testng] [2024-10-22 04:53:12,364] [pool-1-thread-11] Initializing /data/public/2016-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-10-22 04:53:13,162] [pool-1-thread-3] Initializing /data/public/2009-09/time-series.ome.xml: [testng] [2024-10-22 04:53:13,567] [pool-1-thread-8] Initializing /data/public/2013-06/xmlannotation-body-space.ome.xml: [testng] [2024-10-22 04:53:14,450] [pool-1-thread-7] Initializing /data/public/2009-09/ROI.ome.xml: [testng] [2024-10-22 04:53:14,844] [pool-1-thread-12] Initializing /data/curtis/black0.ome: [testng] [2024-10-22 04:53:15,540] [pool-1-thread-1] Initializing /data/public/2010-04/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-10-22 04:53:16,244] [pool-1-thread-5] Initializing /data/sandeep/synth_rbc.ome: [testng] [2024-10-22 04:53:18,007] [pool-1-thread-10] Initializing /data/public/2016-06/xmlannotation-multi-value.ome.xml: [testng] [2024-10-22 04:53:18,333] [pool-1-thread-9] Initializing /data/public/2012-06/multi-channel-z-series.ome.xml: [testng] [2024-10-22 04:53:18,738] [pool-1-thread-4] Initializing /data/public/2008-09/z-series-time-series.ome.xml: [testng] [2024-10-22 04:53:20,717] [pool-1-thread-8] Initializing /data/curtis/black6-7.ome: [testng] [2024-10-22 04:53:21,395] [pool-1-thread-3] Initializing /data/public/2010-06/filter.ome.xml: [testng] [2024-10-22 04:53:21,739] [pool-1-thread-7] Initializing /data/public/2012-06/time-series.ome.xml: [testng] [2024-10-22 04:53:22,077] [pool-1-thread-6] Initializing /data/public/2011-06/z-series.ome.xml: [testng] [2024-10-22 04:53:22,429] [pool-1-thread-11] Initializing /data/public/2016-06/ROI.ome.xml: [testng] [2024-10-22 04:53:22,737] [pool-1-thread-1] Initializing /data/public/2011-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-10-22 04:53:23,496] [pool-1-thread-2] Initializing /data/public/2015-01/time-series.ome.xml: [testng] [2024-10-22 04:53:23,820] [pool-1-thread-5] Initializing /data/public/2010-04/multi-channel.ome.xml: [testng] [2024-10-22 04:53:24,117] [pool-1-thread-12] Initializing /data/public/2013-06/commentannotation.ome.xml: [testng] [2024-10-22 04:53:25,403] [pool-1-thread-10] Initializing /data/public/2016-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-10-22 04:53:25,759] [pool-1-thread-9] Initializing /data/public/2016-06/time-series.ome.xml: [testng] [2024-10-22 04:53:26,067] [pool-1-thread-4] Initializing /data/public/2013-06/z-series.ome.xml: [testng] [2024-10-22 04:53:28,368] [pool-1-thread-11] Initializing /data/public/2008-09/z-series.ome.xml: [testng] [2024-10-22 04:53:28,736] [pool-1-thread-12] Initializing /data/public/2016-06/spim.ome.xml: [testng] [2024-10-22 04:53:29,115] [pool-1-thread-7] Initializing /data/public/2010-04/ROI.ome.xml: [testng] [2024-10-22 04:53:29,442] [pool-1-thread-6] Initializing /data/public/2016-06/folders-simple-taxonomy.ome.xml: [testng] [2024-10-22 04:53:29,785] [pool-1-thread-2] Initializing /data/public/2015-01/xmlannotation-multi-value.ome.xml: [testng] [2024-10-22 04:53:30,089] [pool-1-thread-3] Initializing /data/public/2010-06/xmlannotation-svg.ome.xml: [testng] [2024-10-22 04:53:30,439] [pool-1-thread-5] Initializing /data/public/2013-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-10-22 04:53:30,830] [pool-1-thread-1] Initializing /data/mario/Hoechst_ND - n000000.tif: [testng] [2024-10-22 04:53:32,696] [pool-1-thread-8] Initializing /data/public/2016-06/multi-channel-time-series.ome.xml: [testng] [2024-10-22 04:53:34,240] [pool-1-thread-9] Initializing /data/public/2010-04/multi-channel-time-series.ome.xml: [testng] [2024-10-22 04:53:34,640] [pool-1-thread-4] Initializing /data/public/2013-06/transformations-upgrade.ome.xml: [testng] [2024-10-22 04:53:35,168] [pool-1-thread-10] Initializing /data/public/2010-06/spim.ome.xml: [testng] [2024-10-22 04:53:37,620] [pool-1-thread-8] Initializing /data/public/2012-06/xmlannotation-svg.ome.xml: [testng] [2024-10-22 04:53:37,955] [pool-1-thread-2] Initializing /data/public/2015-01/multi-channel-time-series.ome.xml: [testng] [2024-10-22 04:53:38,239] [pool-1-thread-12] Initializing /data/public/2012-06/tagannotation.ome.xml: [testng] [2024-10-22 04:53:38,562] [pool-1-thread-3] Initializing /data/public/2015-01/instrument-units-alternate.ome.xml: [testng] [2024-10-22 04:53:38,878] [pool-1-thread-7] Initializing /data/public/2016-06/z-series-time-series.ome.xml: [testng] [2024-10-22 04:53:39,240] [pool-1-thread-5] Initializing /data/public/2012-06/multi-channel.ome.xml: [testng] [2024-10-22 04:53:39,556] [pool-1-thread-11] Initializing /data/public/2012-06/spim.ome.xml: [testng] [2024-10-22 04:53:39,918] [pool-1-thread-6] Initializing /data/public/2015-01/xmlannotation-body-space.ome.xml: [testng] [2024-10-22 04:53:41,594] [pool-1-thread-9] Initializing /data/samples/testImportPlateMultiplePlateAcquisitions1508.ome: [testng] [2024-10-22 04:53:42,507] [pool-1-thread-4] Initializing /data/public/2009-09/multi-channel.ome.xml: [testng] [2024-10-22 04:53:42,859] [pool-1-thread-10] Initializing /data/public/2016-06/single-image.ome.xml: [testng] [2024-10-22 04:53:45,059] [pool-1-thread-5] Initializing /data/public/2012-06/no-date.ome.xml: [testng] [2024-10-22 04:53:45,355] [pool-1-thread-8] Initializing /data/public/2012-06/instrument.ome.xml: [testng] [2024-10-22 04:53:45,706] [pool-1-thread-11] Initializing /data/public/2012-06/transformations-upgrade.ome.xml: [testng] [2024-10-22 04:53:46,030] [pool-1-thread-3] Initializing /data/public/2012-06/z-series-time-series.ome.xml: [testng] [2024-10-22 04:53:46,357] [pool-1-thread-7] Initializing /data/public/2008-09/multi-channel-z-series.ome.xml: [testng] [2024-10-22 04:53:46,635] [pool-1-thread-12] Initializing /data/public/2010-04/filter.ome.xml: [testng] [2024-10-22 04:53:46,960] [pool-1-thread-6] Initializing /data/public/2009-09/metadata-only.ome.xml: [testng] [2024-10-22 04:53:47,321] [pool-1-thread-2] Initializing /data/public/2010-06/single-image.ome.xml: [testng] [2024-10-22 04:53:48,882] [pool-1-thread-1] Initializing /data/public/2015-01/hcs.ome.xml: [testng] [2024-10-22 04:53:49,227] [pool-1-thread-9] Initializing /data/public/2016-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-10-22 04:53:49,736] [pool-1-thread-10] Initializing /data/public/2011-06/time-series.ome.xml: [testng] [2024-10-22 04:53:50,086] [pool-1-thread-4] Initializing /data/public/2015-01/commentannotation.ome.xml: [testng] [2024-10-22 04:53:51,864] [pool-1-thread-5] Initializing /data/samples/test.OME: [testng] [2024-10-22 04:53:52,233] [pool-1-thread-8] Initializing /data/public/2009-09/single-image.ome.xml: [testng] [2024-10-22 04:53:52,566] [pool-1-thread-3] Initializing /data/public/2013-06/xmlannotation-svg.ome.xml: [testng] [2024-10-22 04:53:52,855] [pool-1-thread-6] Initializing /data/public/2015-01/spim.ome.xml: [testng] [2024-10-22 04:53:53,191] [pool-1-thread-2] Initializing /data/public/2013-06/xmlannotation-multi-value.ome.xml: [testng] [2024-10-22 04:53:53,500] [pool-1-thread-7] Initializing /data/public/2016-06/metadata-only.ome.xml: [testng] [2024-10-22 04:53:53,869] [pool-1-thread-11] Initializing /data/public/2013-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-10-22 04:53:54,863] [pool-1-thread-12] Initializing /data/public/2009-09/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-10-22 04:53:55,276] [pool-1-thread-9] Initializing /data/public/2011-06/ROI.ome.xml: [testng] [2024-10-22 04:53:55,667] [pool-1-thread-1] Initializing /data/public/2015-01/instrument-units-default.ome.xml: [testng] [2024-10-22 04:53:57,485] [pool-1-thread-4] Initializing /data/public/2011-06/xmlannotation-svg.ome.xml: [testng] [2024-10-22 04:53:57,856] [pool-1-thread-10] Initializing /data/public/2008-09/multi-channel.ome.xml: [testng] [2024-10-22 04:53:58,699] [pool-1-thread-7] Initializing /data/public/2016-06/xmlannotation-svg.ome.xml: [testng] [2024-10-22 04:53:58,994] [pool-1-thread-8] Initializing /data/public/2012-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-10-22 04:53:59,331] [pool-1-thread-5] Initializing /data/public/2015-01/transformations-downgrade.ome.xml: [testng] [2024-10-22 04:53:59,588] [pool-1-thread-2] Initializing /data/public/2009-09/multi-channel-time-series.ome.xml: [testng] [2024-10-22 04:53:59,839] [pool-1-thread-3] Initializing /data/public/2011-06/single-image.ome.xml: [testng] [2024-10-22 04:54:00,118] [pool-1-thread-11] Initializing /data/public/2015-01/timestampannotation-posix-only.ome.xml: [testng] [2024-10-22 04:54:00,422] [pool-1-thread-6] Initializing /data/public/2010-06/multi-channel-z-series.ome.xml: [testng] [2024-10-22 04:54:00,735] [pool-1-thread-12] Initializing /data/public/2010-04/time-series.ome.xml: [testng] [2024-10-22 04:54:02,145] [pool-1-thread-9] Initializing /data/samples/Sample-2003-custom-ST.ome: [testng] [2024-10-22 04:54:02,502] [pool-1-thread-1] Initializing /data/public/2009-09/multi-channel-z-series.ome.xml: [testng] [2024-10-22 04:54:03,052] [pool-1-thread-10] Initializing /data/public/2009-09/multi-channel-z-series-time-series.ome.xml: [testng] [2024-10-22 04:54:03,431] [pool-1-thread-4] Initializing /data/public/2016-06/minimum-specification.ome.xml: [testng] [2024-10-22 04:54:04,688] [pool-1-thread-7] Initializing /data/public/2010-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-10-22 04:54:04,975] [pool-1-thread-6] Initializing /data/public/2013-06/multi-channel-z-series.ome.xml: [testng] [2024-10-22 04:54:05,319] [pool-1-thread-12] Initializing /data/public/2016-06/tagannotation.ome.xml: [testng] [2024-10-22 04:54:05,639] [pool-1-thread-3] Initializing /data/public/2013-06/transformations-downgrade.ome.xml: [testng] [2024-10-22 04:54:05,924] [pool-1-thread-8] Initializing /data/public/2010-06/z-series.ome.xml: [testng] [2024-10-22 04:54:06,205] [pool-1-thread-5] Initializing /data/public/2016-06/timestampannotation.ome.xml: [testng] [2024-10-22 04:54:06,647] [pool-1-thread-11] Initializing /data/public/2013-06/instrument.ome.xml: [testng] [2024-10-22 04:54:06,974] [pool-1-thread-2] Initializing /data/public/2016-06/instrument-units-default.ome.xml: [testng] [2024-10-22 04:54:07,568] [pool-1-thread-1] Initializing /data/public/2012-06/filter.ome.xml: [testng] [2024-10-22 04:54:08,099] [pool-1-thread-9] Initializing /data/public/2008-09/single-image.ome.xml: [testng] [2024-10-22 04:54:09,879] [pool-1-thread-4] Initializing /data/public/2010-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-10-22 04:54:10,318] [pool-1-thread-10] Initializing /data/curtis/all-black.tif: [testng] [2024-10-22 04:54:12,583] [pool-1-thread-12] Initializing /data/public/2011-06/filter.ome.xml: [testng] [2024-10-22 04:54:12,889] [pool-1-thread-11] Initializing /data/public/2010-04/single-image.ome.xml: [testng] [2024-10-22 04:54:13,292] [pool-1-thread-2] Initializing /data/public/2016-06/no-date.ome.xml: [testng] [2024-10-22 04:54:13,717] [pool-1-thread-8] Initializing /data/public/2013-06/single-image.ome.xml: [testng] [2024-10-22 04:54:14,002] [pool-1-thread-6] Initializing /data/public/2008-09/dataset-group-project.ome.xml: [testng] [2024-10-22 04:54:14,297] [pool-1-thread-7] Initializing /data/public/2011-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-10-22 04:54:15,253] [pool-1-thread-3] Initializing /data/public/2012-06/multi-channel-time-series.ome.xml: [testng] [2024-10-22 04:54:15,760] [pool-1-thread-5] Initializing /data/public/2016-06/z-series.ome.xml: [testng] [2024-10-22 04:54:16,091] [pool-1-thread-1] Initializing /data/public/2012-06/transformations-downgrade.ome.xml: [testng] [2024-10-22 04:54:17,371] [pool-1-thread-9] Initializing /data/public/2013-06/multi-channel.ome.xml: [testng] [2024-10-22 04:54:18,056] [pool-1-thread-4] Initializing /data/public/2009-09/z-series-time-series.ome.xml: [testng] [2024-10-22 04:54:19,648] [pool-1-thread-8] Initializing /data/samples/sdub.ome: [testng] [2024-10-22 04:54:20,112] [pool-1-thread-2] Initializing /data/public/2013-06/ROI.ome.xml: [testng] [2024-10-22 04:54:20,508] [pool-1-thread-5] Initializing /data/public/2013-06/z-series-time-series.ome.xml: [testng] [2024-10-22 04:54:20,881] [pool-1-thread-3] Initializing /data/public/2016-06/instrument.ome.xml: [testng] [2024-10-22 04:54:21,260] [pool-1-thread-12] Initializing /data/public/2013-06/timestampannotation-posix-only.ome.xml: [testng] [2024-10-22 04:54:21,670] [pool-1-thread-11] Initializing /data/public/2016-06/xmlannotation-body-space.ome.xml: [testng] [2024-10-22 04:54:22,111] [pool-1-thread-7] Initializing /data/public/2011-06/z-series-time-series.ome.xml: [testng] [2024-10-22 04:54:23,038] [pool-1-thread-1] Initializing /data/public/2010-06/time-series.ome.xml: [testng] [2024-10-22 04:54:23,457] [pool-1-thread-6] Initializing /data/public/2015-01/instrument.ome.xml: [testng] [2024-10-22 04:54:24,878] [pool-1-thread-9] Initializing /data/public/2012-06/single-image.ome.xml: [testng] [2024-10-22 04:54:25,792] [pool-1-thread-4] Initializing /data/public/2012-06/z-series.ome.xml: [testng] [2024-10-22 04:54:26,570] [pool-1-thread-10] Initializing /data/public/2016-06/filter.ome.xml: [testng] [2024-10-22 04:54:27,564] [pool-1-thread-11] Initializing /data/public/2008-09/multi-pixel-aquired.ome.xml: [testng] [2024-10-22 04:54:27,890] [pool-1-thread-1] Initializing /data/public/2015-01/metadata-only.ome.xml: [testng] [2024-10-22 04:54:28,208] [pool-1-thread-7] Initializing /data/public/2012-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-10-22 04:54:28,564] [pool-1-thread-6] Initializing /data/public/2013-06/no-date.ome.xml: [testng] [2024-10-22 04:54:28,856] [pool-1-thread-5] Initializing /data/public/2016-06/transformations-upgrade.ome.xml: [testng] [2024-10-22 04:54:29,187] [pool-1-thread-2] Initializing /data/public/2011-06/multi-channel-z-series.ome.xml: [testng] [2024-10-22 04:54:29,505] [pool-1-thread-3] Initializing /data/public/2015-01/xmlannotation-svg.ome.xml: [testng] [2024-10-22 04:54:29,933] [pool-1-thread-12] Initializing /data/curtis/min-sample-2008-02.ome: [testng] [2024-10-22 04:54:30,902] [pool-1-thread-8] Initializing /data/public/2008-09/multi-pixel-default.ome.xml: [testng] [2024-10-22 04:54:31,991] [pool-1-thread-9] Initializing /data/public/2009-09/z-series.ome.xml: [testng] [2024-10-22 04:54:32,630] [pool-1-thread-4] Initializing /data/public/2015-01/no-date.ome.xml: [testng] [2024-10-22 04:54:33,281] [pool-1-thread-10] Initializing /data/public/2015-01/z-series-time-series.ome.xml: [testng] [2024-10-22 04:54:34,446] [pool-1-thread-1] Initializing /data/samples/Sample-2007_06.ome: [testng] [2024-10-22 04:54:34,886] [pool-1-thread-6] Initializing /data/public/2008-09/instrument.ome.xml: [testng] [2024-10-22 04:54:35,763] [pool-1-thread-3] Initializing /data/public/2012-06/ROI.ome.xml: [testng] [2024-10-22 04:54:36,054] [pool-1-thread-5] Initializing /data/public/2016-06/folders-larger-taxonomy.ome.xml: [testng] [2024-10-22 04:54:36,423] [pool-1-thread-7] Initializing /data/curtis/black0.tif: [testng] [2024-10-22 04:54:38,473] [pool-1-thread-2] Initializing /data/public/2015-01/tagannotation.ome.xml: [testng] [2024-10-22 04:54:38,889] [pool-1-thread-8] Initializing /data/public/2012-06/metadata-only.ome.xml: [testng] [2024-10-22 04:54:39,249] [pool-1-thread-11] Initializing /data/public/2010-04/multi-channel-z-series.ome.xml: [testng] [2024-10-22 04:54:39,506] [pool-1-thread-12] Initializing /data/mario/Hoechst_ND - n000000.ome: [testng] [2024-10-22 04:54:40,914] [pool-1-thread-9] Initializing /data/public/2015-01/single-image.ome.xml: [testng] [2024-10-22 04:54:41,552] [pool-1-thread-4] Initializing /data/public/2015-01/timestampannotation.ome.xml: [testng] [2024-10-22 04:54:42,012] [pool-1-thread-10] Initializing /data/public/2010-04/multi-channel-z-series-time-series.ome.xml: [testng] [2024-10-22 04:54:43,421] [pool-1-thread-8] Initializing /data/public/2013-06/time-series.ome.xml: [testng] [2024-10-22 04:54:43,720] [pool-1-thread-2] Initializing /data/public/2016-06/multi-channel-z-series.ome.xml: [testng] [2024-10-22 04:54:44,038] [pool-1-thread-3] Initializing /data/public/2015-01/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-10-22 04:54:44,378] [pool-1-thread-6] Initializing /data/public/2013-06/timestampannotation.ome.xml: [testng] [2024-10-22 04:54:44,672] [pool-1-thread-5] Initializing /data/public/2010-06/z-series-time-series.ome.xml: [testng] [2024-10-22 04:54:45,089] [pool-1-thread-1] Initializing /data/public/2015-01/transformations-upgrade.ome.xml: [testng] [2024-10-22 04:54:45,424] [pool-1-thread-11] Initializing /data/public/2013-06/metadata-only.ome.xml: [testng] [2024-10-22 04:54:46,143] [pool-1-thread-9] Initializing /data/public/2009-09/instrument.ome.xml: [testng] [2024-10-22 04:54:47,791] [pool-1-thread-4] Initializing /data/samples/Sample-2003_FC.ome: [testng] [2024-10-22 04:54:48,398] [pool-1-thread-10] Initializing /data/melissa/large-xml-test.ome: [testng] [2024-10-22 04:54:56,334] [pool-1-thread-12] Initializing /data/public/2015-01/multi-channel.ome.xml: [testng] [2024-10-22 04:54:56,992] [pool-1-thread-2] Initializing /data/public/2011-06/multi-channel-time-series.ome.xml: [testng] [2024-10-22 04:54:57,416] [pool-1-thread-11] Initializing /data/public/2015-01/multi-channel-z-series-time-series.ome.xml: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10706, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 16 seconds Finished: SUCCESS