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Started by upstream project "BIOFORMATS-test-repo" build number 235 originally caused by: Started by upstream project "Trigger" build number 260 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins18215371106483578373.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_36898_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:44:02,507 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:44:02,509 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 01:44:02,509 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:44:02,510 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:44:02,510 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:44:02,510 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:44:02,511 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:44:02,511 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:44:02,511 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:44:02,512 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:44:02,512 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:44:02,512 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:44:02,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:44:02,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:44:02,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:44:02,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:44:02,721 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:44:02,721 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:44:02,721 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:44:02,722 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:44:02,722 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 01:44:02,722 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 01:44:02,723 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 212 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-26 01:44:02,731] [main] java.version = 11.0.16 [testng] 01:44:02,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:44:02,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:44:02,775 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-26_01-44-02.log] [testng] 01:44:02,776 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-26 01:44:02,778] [main] testng.directory = /data [testng] [2024-10-26 01:44:02,778] [main] testng.configDirectory = /config [testng] [2024-10-26 01:44:02,788] [main] testng.multiplier = 1.0 [testng] [2024-10-26 01:44:02,789] [main] testng.in-memory = false [testng] [2024-10-26 01:44:02,789] [main] testng.allow-missing = false [testng] [2024-10-26 01:44:02,789] [main] user.language = en [testng] [2024-10-26 01:44:02,789] [main] user.country = ${user.country} [testng] [2024-10-26 01:44:02,789] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-26 01:44:10,557] [main] ---------------------------------------- [testng] [2024-10-26 01:44:10,557] [main] Total files: 259 [testng] [2024-10-26 01:44:10,557] [main] Scan time: 7.768 s (29 ms/file) [testng] [2024-10-26 01:44:10,557] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-26 01:50:07,825] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] 01:50:07,827 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:50:07,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:07,849 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-26_01-50-07.log] [testng] 01:50:07,850 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38f54697 - End of configuration. [testng] [2024-10-26 01:50:08,091] [pool-1-thread-12] Initializing /data/aryeh/030408 2 1.oib: [testng] 01:50:08,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:50:08,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:08,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-26_01-50-08.log] [testng] 01:50:08,092 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f07160b - End of configuration. [testng] [2024-10-26 01:50:08,357] [pool-1-thread-11] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 01:50:08,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:50:08,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:08,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-26_01-50-08.log] [testng] 01:50:08,359 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77f2efa2 - End of configuration. [testng] [2024-10-26 01:50:09,448] [pool-1-thread-10] Initializing /data/marc/V0606J.oib: [testng] 01:50:09,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:50:09,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:09,449 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-26_01-50-09.log] [testng] 01:50:09,449 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e5b5d1b - End of configuration. [testng] [2024-10-26 01:50:11,147] [pool-1-thread-9] Initializing /data/johannes/step4.bmp: [testng] 01:50:11,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:50:11,148 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:11,148 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-26_01-50-11.log] [testng] 01:50:11,149 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31da32d2 - End of configuration. [testng] [2024-10-26 01:50:11,577] [pool-1-thread-8] Initializing /data/karl/Image0009.oib: [testng] 01:50:11,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:50:11,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:11,578 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-26_01-50-11.log] [testng] 01:50:11,578 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4758a54a - End of configuration. [testng] [2024-10-26 01:50:11,882] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] 01:50:11,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:50:11,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:11,883 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-26_01-50-11.log] [testng] 01:50:11,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@176a904c - End of configuration. [testng] [2024-10-26 01:50:12,650] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] 01:50:12,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:50:12,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:12,650 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-26_01-50-12.log] [testng] 01:50:12,651 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66242606 - End of configuration. [testng] [2024-10-26 01:50:13,050] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF: [testng] 01:50:13,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:50:13,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:13,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-26_01-50-13.log] [testng] 01:50:13,051 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c6d8b49 - End of configuration. [testng] [2024-10-26 01:50:24,792] [pool-1-thread-4] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] 01:50:24,792 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:50:24,792 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:24,792 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-26_01-50-24.log] [testng] 01:50:24,793 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c8475a9 - End of configuration. [testng] [2024-10-26 01:50:25,120] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] 01:50:25,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:50:25,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:25,121 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-26_01-50-25.log] [testng] 01:50:25,121 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49a3fb67 - End of configuration. [testng] [2024-10-26 01:50:25,448] [pool-1-thread-2] Initializing /data/brian/Lambda10nm.oib: [testng] 01:50:25,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:50:25,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:25,449 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-26_01-50-25.log] [testng] 01:50:25,449 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7302f6d9 - End of configuration. [testng] [2024-10-26 01:50:28,665] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-10-26 01:50:29,600] [pool-1-thread-2] Initializing /data/glen/simulstack.oif: [testng] [2024-10-26 01:50:31,125] [pool-1-thread-1] Initializing /data/molly/11OCT4.OIF: [testng] [2024-10-26 01:50:54,935] [pool-1-thread-3] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-26 01:51:01,630] [pool-1-thread-12] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-26 01:51:09,684] [pool-1-thread-8] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-26 01:51:12,076] [pool-1-thread-11] Initializing /data/glen/simulstack.oib: [testng] [2024-10-26 01:51:18,210] [pool-1-thread-7] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-26 01:51:20,771] [pool-1-thread-6] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-26 01:51:47,145] [pool-1-thread-10] Initializing /data/david/Image0016.oif: [testng] [2024-10-26 01:52:10,858] [pool-1-thread-9] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-26 01:54:00,710] [pool-1-thread-3] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-26 01:54:12,804] [pool-1-thread-8] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-26 01:54:19,376] [pool-1-thread-12] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-10-26 01:54:19,985] [pool-1-thread-11] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-26 01:54:20,358] [pool-1-thread-7] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-26 01:54:21,171] [pool-1-thread-6] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-26 01:54:22,471] [pool-1-thread-4] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-26 01:54:23,094] [pool-1-thread-8] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-26 01:54:23,450] [pool-1-thread-11] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-26 01:54:23,974] [pool-1-thread-7] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-26 01:54:31,607] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-26 01:57:00,457] [pool-1-thread-8] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-26 01:57:01,552] [pool-1-thread-6] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-26 01:57:03,362] [pool-1-thread-4] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-26 01:57:04,721] [pool-1-thread-3] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-26 01:57:05,434] [pool-1-thread-6] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-10-26 01:57:07,805] [pool-1-thread-6] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-26 01:58:22,462] [pool-1-thread-4] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-26 01:58:28,911] [pool-1-thread-10] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-26 02:00:16,959] [pool-1-thread-8] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-26 02:00:18,249] [pool-1-thread-3] Initializing /data/allan/62909#1.oib: [testng] [2024-10-26 02:00:18,918] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-26 02:00:24,132] [pool-1-thread-3] Initializing /data/molly/11OCT5.OIF: [testng] [2024-10-26 02:00:40,303] [pool-1-thread-8] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-26 02:00:44,365] [pool-1-thread-8] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-26 02:02:50,535] [pool-1-thread-10] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-26 02:02:53,512] [pool-1-thread-10] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-26 02:03:35,331] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-26 02:03:41,605] [pool-1-thread-10] Initializing /data/jae/Image0001.oib: [testng] [2024-10-26 02:03:46,909] [pool-1-thread-10] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-26 02:04:19,896] [pool-1-thread-10] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-26 02:04:25,927] [pool-1-thread-10] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-26 02:05:27,926] [pool-1-thread-10] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-26 02:05:32,581] [pool-1-thread-10] Initializing /data/michael/CELL3.oib: [testng] [2024-10-26 02:05:36,081] [pool-1-thread-10] Initializing /data/simon/never_worked.oib: [testng] [2024-10-26 02:05:39,877] [pool-1-thread-10] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-26 02:06:07,353] [pool-1-thread-10] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-26 02:06:12,718] [pool-1-thread-10] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-26 02:06:17,430] [pool-1-thread-10] Initializing /data/johannes/step1.bmp: [testng] [2024-10-26 02:06:20,329] [pool-1-thread-10] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-26 02:06:26,227] [pool-1-thread-10] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-26 02:06:30,906] [pool-1-thread-10] Initializing /data/yoshihito/XY.oif: [testng] [2024-10-26 02:06:48,463] [pool-1-thread-10] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-26 02:06:53,060] [pool-1-thread-10] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-10-26 02:09:12,858] [pool-1-thread-2] Initializing /data/glen/111407.oif: [testng] [2024-10-26 02:12:18,293] [pool-1-thread-1] Initializing /data/brian/FLIP.oib: [testng] [2024-10-26 02:12:23,408] [pool-1-thread-1] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-26 02:12:29,681] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-26 02:12:33,251] [pool-1-thread-1] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-26 02:12:36,516] [pool-1-thread-1] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-26 02:12:39,196] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-26 02:12:44,687] [pool-1-thread-11] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-26 02:13:11,588] [pool-1-thread-1] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-26 02:13:14,892] [pool-1-thread-1] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-26 02:13:18,019] [pool-1-thread-1] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-26 02:14:06,552] [pool-1-thread-10] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-26 02:14:09,582] [pool-1-thread-10] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-26 02:14:29,788] [pool-1-thread-4] Initializing /data/christian/20min.oif: [testng] [2024-10-26 02:14:42,912] [pool-1-thread-4] Initializing /data/marc/V0606L.oib: [testng] [2024-10-26 02:14:46,985] [pool-1-thread-10] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-26 02:15:03,326] [pool-1-thread-4] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-10-26 02:15:28,901] [pool-1-thread-4] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-26 02:15:31,098] [pool-1-thread-4] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-26 02:15:35,108] [pool-1-thread-4] Initializing /data/aryeh/1h.oib: [testng] [2024-10-26 02:15:41,690] [pool-1-thread-9] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-10-26 02:15:43,987] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-26 02:15:50,515] [pool-1-thread-9] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-26 02:15:51,850] [pool-1-thread-9] Initializing /data/david/Image0016.oib: [testng] [2024-10-26 02:15:54,930] [pool-1-thread-3] Initializing /data/monica/Image0056.oif: [testng] [2024-10-26 02:15:56,109] [pool-1-thread-9] Initializing /data/glen/Image0002.oif: [testng] [2024-10-26 02:16:46,683] [pool-1-thread-3] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-26 02:16:52,647] [pool-1-thread-3] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-26 02:16:58,371] [pool-1-thread-3] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-26 02:17:23,252] [pool-1-thread-3] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-10-26 02:17:28,824] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-26 02:17:34,171] [pool-1-thread-3] Initializing /data/johannes/step3.bmp: [testng] [2024-10-26 02:17:36,098] [pool-1-thread-3] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-10-26 02:19:57,235] [pool-1-thread-7] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-26 02:20:03,474] [pool-1-thread-7] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-26 02:20:09,988] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-26 02:20:16,126] [pool-1-thread-7] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-26 02:20:21,827] [pool-1-thread-7] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-26 02:20:24,885] [pool-1-thread-2] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-26 02:20:38,649] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-10-26 02:22:01,500] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-26 02:22:08,821] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-26 02:23:41,585] [pool-1-thread-10] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-26 02:23:47,343] [pool-1-thread-10] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-26 02:23:52,649] [pool-1-thread-10] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-26 02:23:58,588] [pool-1-thread-10] Initializing /data/pedro/plv-test.oib: [testng] [2024-10-26 02:24:04,192] [pool-1-thread-10] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-10-26 02:27:41,999] [pool-1-thread-4] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-26 02:28:54,485] [pool-1-thread-5] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-26 02:28:59,796] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-26 02:29:03,606] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-26 02:29:08,592] [pool-1-thread-5] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-26 02:29:17,958] [pool-1-thread-5] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-26 02:29:26,191] [pool-1-thread-5] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-26 02:29:33,895] [pool-1-thread-5] Initializing /data/sten/01.oib: [testng] [2024-10-26 02:29:38,999] [pool-1-thread-5] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-26 02:29:45,503] [pool-1-thread-5] Initializing /data/johannes/step2.bmp: [testng] [2024-10-26 02:29:48,002] [pool-1-thread-5] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-26 02:33:38,673] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-26 02:33:49,759] [pool-1-thread-12] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-26 02:34:00,439] [pool-1-thread-12] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-10-26 02:34:54,971] [pool-1-thread-12] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-10-26 02:34:58,082] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-10-26 02:35:02,369] [pool-1-thread-12] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-26 02:35:06,427] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-26 02:35:08,917] [pool-1-thread-12] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-26 02:35:13,814] [pool-1-thread-11] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-26 02:35:17,159] [pool-1-thread-12] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-26 02:35:50,839] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-26 02:35:57,962] [pool-1-thread-9] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-26 02:36:32,567] [pool-1-thread-11] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-26 02:36:41,148] [pool-1-thread-11] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-26 02:36:50,931] [pool-1-thread-11] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-26 02:37:03,982] [pool-1-thread-12] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-10-26 02:37:12,961] [pool-1-thread-12] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-26 02:37:14,764] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-26 02:37:21,659] [pool-1-thread-12] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 03:03:03,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:03:03,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:03,284 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-26_03-03-03.log] [testng] 03:03:03,285 |-INFO in ch.qos.logback.core.sift.SiftProcessor@277bdcab - End of configuration. [testng] 03:53:27,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:53:27,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:53:27,383 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-26_03-53-27.log] [testng] 03:53:27,384 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f116270 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 129 minutes 30 seconds Finished: SUCCESS