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Started by upstream project "BIOFORMATS-test-repo" build number 237 originally caused by: Started by upstream project "Trigger" build number 262 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins13457604647421809852.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_37187_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:24:30,626 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:24:30,627 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:24:30,628 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:24:30,629 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:24:30,629 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:24:30,629 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:24:30,629 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:24:30,629 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:24:30,630 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:24:30,630 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:24:30,630 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:24:30,630 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:24:30,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:24:30,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:24:30,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:24:30,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:24:30,890 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:24:30,890 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:24:30,890 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:24:30,891 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:24:30,891 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:24:30,892 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:24:30,892 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 262 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-28 00:24:30,901] [main] java.version = 1.8.0_342 [testng] 00:24:30,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:24:30,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:30,949 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-28_00-24-30.log] [testng] 00:24:30,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-10-28 00:24:30,953] [main] testng.directory = /data [testng] [2024-10-28 00:24:30,953] [main] testng.configDirectory = /config [testng] [2024-10-28 00:24:30,965] [main] testng.multiplier = 1.0 [testng] [2024-10-28 00:24:30,965] [main] testng.in-memory = false [testng] [2024-10-28 00:24:30,965] [main] testng.allow-missing = false [testng] [2024-10-28 00:24:30,965] [main] user.language = fr [testng] [2024-10-28 00:24:30,965] [main] user.country = FR [testng] [2024-10-28 00:24:30,965] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-28 00:24:34,428] [main] ---------------------------------------- [testng] [2024-10-28 00:24:34,429] [main] Total files: 103 [testng] [2024-10-28 00:24:34,429] [main] Scan time: 3.463 s (33 ms/file) [testng] [2024-10-28 00:24:34,429] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-28 00:24:48,188] [pool-1-thread-1] Initializing /data/melissa/annotation-test.dm3: [testng] 00:24:48,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:24:48,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:48,189 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-28_00-24-48.log] [testng] 00:24:48,190 |-INFO in ch.qos.logback.core.sift.SiftProcessor@483af4f3 - End of configuration. [testng] [2024-10-28 00:24:48,294] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] 00:24:48,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:24:48,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:48,295 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-28_00-24-48.log] [testng] 00:24:48,295 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fe08a88 - End of configuration. [testng] [2024-10-28 00:24:49,016] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] 00:24:49,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:24:49,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:49,017 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-28_00-24-49.log] [testng] 00:24:49,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@542c57e9 - End of configuration. [testng] [2024-10-28 00:24:49,116] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] 00:24:49,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:24:49,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:49,117 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-28_00-24-49.log] [testng] 00:24:49,117 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2479d796 - End of configuration. [testng] [2024-10-28 00:24:49,842] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] 00:24:49,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:24:49,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:49,843 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-28_00-24-49.log] [testng] 00:24:49,844 |-INFO in ch.qos.logback.core.sift.SiftProcessor@690af6b5 - End of configuration. [testng] [2024-10-28 00:24:50,021] [pool-1-thread-8] Initializing /data/jay/camtest1.dm3: [testng] 00:24:50,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:24:50,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:50,022 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-28_00-24-50.log] [testng] 00:24:50,023 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1df89612 - End of configuration. [testng] [2024-10-28 00:24:50,176] [pool-1-thread-7] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 00:24:50,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:24:50,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:50,177 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-28_00-24-50.log] [testng] 00:24:50,177 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cd34045 - End of configuration. [testng] [2024-10-28 00:24:50,350] [pool-1-thread-6] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] 00:24:50,351 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:24:50,351 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:50,351 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-28_00-24-50.log] [testng] 00:24:50,352 |-INFO in ch.qos.logback.core.sift.SiftProcessor@605c2d3a - End of configuration. [testng] [2024-10-28 00:24:50,497] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] 00:24:50,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:24:50,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:50,498 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-28_00-24-50.log] [testng] 00:24:50,498 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3098e639 - End of configuration. [testng] [2024-10-28 00:24:50,730] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] 00:24:50,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:24:50,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:50,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-28_00-24-50.log] [testng] 00:24:50,731 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54b408a5 - End of configuration. [testng] [2024-10-28 00:24:50,859] [pool-1-thread-3] Initializing /data/qa-21761/example.dm4: [testng] 00:24:50,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:24:50,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:50,860 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-28_00-24-50.log] [testng] 00:24:50,860 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7461f431 - End of configuration. [testng] [2024-10-28 00:24:50,990] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] 00:24:50,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:24:50,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:50,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-28_00-24-50.log] [testng] 00:24:50,992 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e314d56 - End of configuration. [testng] [2024-10-28 00:24:55,059] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-10-28 00:24:55,976] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-10-28 00:24:56,371] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-10-28 00:24:56,487] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-10-28 00:24:57,266] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-10-28 00:24:57,727] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-10-28 00:24:59,587] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-10-28 00:24:59,966] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-10-28 00:25:00,127] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-10-28 00:25:01,042] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-10-28 00:25:01,282] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-10-28 00:25:02,256] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-10-28 00:25:03,330] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-10-28 00:25:03,518] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-10-28 00:25:04,253] [pool-1-thread-3] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-10-28 00:25:04,600] [pool-1-thread-2] Initializing /data/jay/dnasample1.dm3: [testng] [2024-10-28 00:25:05,386] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-10-28 00:25:05,657] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-10-28 00:25:05,816] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-10-28 00:25:05,965] [pool-1-thread-9] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-10-28 00:25:07,826] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-10-28 00:25:08,849] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-10-28 00:25:09,673] [pool-1-thread-3] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-10-28 00:25:10,751] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-10-28 00:25:11,192] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-10-28 00:25:11,608] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-10-28 00:25:11,760] [pool-1-thread-8] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-10-28 00:25:12,640] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-10-28 00:25:13,301] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-10-28 00:25:13,839] [pool-1-thread-5] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-10-28 00:25:16,241] [pool-1-thread-2] Initializing /data/ofra/lowloss.dm3: [testng] [2024-10-28 00:25:16,420] [pool-1-thread-3] Initializing /data/jay/smallerfile.dm3: [testng] [2024-10-28 00:25:16,679] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-10-28 00:25:17,800] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-10-28 00:25:17,988] [pool-1-thread-9] Initializing /data/melissa/annotation-test.tif: [testng] [2024-10-28 00:25:19,336] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-10-28 00:25:19,516] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-10-28 00:25:20,324] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-10-28 00:25:20,853] [pool-1-thread-3] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-10-28 00:25:22,140] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-10-28 00:25:24,208] [pool-1-thread-6] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-10-28 00:25:24,972] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-10-28 00:25:25,121] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-10-28 00:25:25,468] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-10-28 00:25:25,985] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-10-28 00:25:27,073] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-10-28 00:25:27,413] [pool-1-thread-4] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-10-28 00:25:27,575] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-10-28 00:25:28,432] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-10-28 00:25:29,427] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-10-28 00:25:30,411] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-10-28 00:25:31,400] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-28 00:25:32,495] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-10-28 00:25:32,700] [pool-1-thread-7] Initializing /data/jay/DMtest2.dm3: [testng] [2024-10-28 00:25:33,144] [pool-1-thread-11] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-10-28 00:25:34,287] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-10-28 00:25:35,150] [pool-1-thread-10] Initializing /data/samples/test-tiles.dm3: [testng] [2024-10-28 00:25:35,541] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-10-28 00:25:35,724] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-28 00:25:37,502] [pool-1-thread-1] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-10-28 00:25:38,307] [pool-1-thread-12] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-10-28 00:25:38,593] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-10-28 00:25:41,321] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-10-28 00:25:41,758] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-10-28 00:25:42,040] [pool-1-thread-3] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-10-28 00:25:42,557] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-10-28 00:25:44,233] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-10-28 00:25:44,943] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-10-28 00:25:45,112] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-10-28 00:25:46,465] [pool-1-thread-12] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-10-28 00:25:47,537] [pool-1-thread-5] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-10-28 00:25:48,121] [pool-1-thread-9] Initializing /data/jay/dnasample.tif: [testng] [2024-10-28 00:25:50,233] [pool-1-thread-3] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-10-28 00:25:50,822] [pool-1-thread-4] Initializing /data/jay/DMtest.dm3: [testng] [2024-10-28 00:25:51,672] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-10-28 00:25:52,834] [pool-1-thread-2] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-10-28 00:25:53,577] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-10-28 00:25:55,060] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-10-28 00:25:56,531] [pool-1-thread-7] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-10-28 00:25:56,984] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-10-28 00:25:57,158] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-10-28 00:25:57,571] [pool-1-thread-4] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-10-28 00:25:57,790] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-10-28 00:25:58,461] [pool-1-thread-12] Initializing /data/qa-7642/8.dm4: [testng] [2024-10-28 00:25:58,671] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-10-28 00:25:59,855] [pool-1-thread-5] Initializing /data/jay/biosamplefullframetif.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 42 seconds Finished: SUCCESS