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Started by upstream project "BIOFORMATS-test-repo" build number 237 originally caused by: Started by upstream project "Trigger" build number 262 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins9447432698684848501.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_37226_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:48:57,761 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:48:57,763 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:48:57,763 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:48:57,764 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:48:57,764 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:48:57,764 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:48:57,764 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:48:57,764 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:48:57,765 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:48:57,765 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:48:57,765 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:48:57,765 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:48:58,010 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:48:58,010 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:48:58,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:48:58,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:48:58,048 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:48:58,048 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:48:58,049 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:48:58,049 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:48:58,049 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:48:58,050 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:48:58,050 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 285 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-28 00:48:58,060] [main] java.version = 1.8.0_342 [testng] 00:48:58,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:48:58,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:58,106 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-28_00-48-58.log] [testng] 00:48:58,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-10-28 00:48:58,109] [main] testng.directory = /data [testng] [2024-10-28 00:48:58,110] [main] testng.configDirectory = /config [testng] [2024-10-28 00:48:58,121] [main] testng.multiplier = 1.0 [testng] [2024-10-28 00:48:58,122] [main] testng.in-memory = false [testng] [2024-10-28 00:48:58,122] [main] testng.allow-missing = false [testng] [2024-10-28 00:48:58,122] [main] user.language = fr [testng] [2024-10-28 00:48:58,122] [main] user.country = FR [testng] [2024-10-28 00:48:58,122] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-28 00:49:05,395] [main] ---------------------------------------- [testng] [2024-10-28 00:49:05,395] [main] Total files: 259 [testng] [2024-10-28 00:49:05,395] [main] Scan time: 7.273 s (28 ms/file) [testng] [2024-10-28 00:49:05,395] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-28 00:55:13,825] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 00:55:13,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:55:13,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:13,827 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-28_00-55-13.log] [testng] 00:55:13,828 |-INFO in ch.qos.logback.core.sift.SiftProcessor@363eea62 - End of configuration. [testng] [2024-10-28 00:55:14,191] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] 00:55:14,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:55:14,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:14,192 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-28_00-55-14.log] [testng] 00:55:14,192 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28ba72e8 - End of configuration. [testng] [2024-10-28 00:55:14,315] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 00:55:14,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:55:14,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:14,316 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-28_00-55-14.log] [testng] 00:55:14,316 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45883a6f - End of configuration. [testng] [2024-10-28 00:55:15,357] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] 00:55:15,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:55:15,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:15,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-28_00-55-15.log] [testng] 00:55:15,358 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39b66e5 - End of configuration. [testng] [2024-10-28 00:55:15,836] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] 00:55:15,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:55:15,836 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:15,837 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-28_00-55-15.log] [testng] 00:55:15,838 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a7ad952 - End of configuration. [testng] [2024-10-28 00:55:15,980] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 00:55:15,980 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:55:15,980 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:15,981 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-28_00-55-15.log] [testng] 00:55:15,981 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e2ec2c8 - End of configuration. [testng] [2024-10-28 00:55:16,132] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] 00:55:16,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:55:16,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:16,133 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-28_00-55-16.log] [testng] 00:55:16,133 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c30af60 - End of configuration. [testng] [2024-10-28 00:55:17,944] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] 00:55:17,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:55:17,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:17,945 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-28_00-55-17.log] [testng] 00:55:17,945 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a92e93a - End of configuration. [testng] [2024-10-28 00:55:18,167] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 00:55:18,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:55:18,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:18,168 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-28_00-55-18.log] [testng] 00:55:18,169 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62e737d3 - End of configuration. [testng] [2024-10-28 00:55:18,317] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] 00:55:18,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:55:18,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:18,318 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-28_00-55-18.log] [testng] 00:55:18,318 |-INFO in ch.qos.logback.core.sift.SiftProcessor@518a434b - End of configuration. [testng] [2024-10-28 00:55:20,109] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif: [testng] 00:55:20,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:55:20,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:20,110 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-28_00-55-20.log] [testng] 00:55:20,110 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26c3b316 - End of configuration. [testng] [2024-10-28 00:55:20,257] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] 00:55:20,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:55:20,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:20,259 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-28_00-55-20.log] [testng] 00:55:20,259 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10a6e5e0 - End of configuration. [testng] [2024-10-28 00:55:23,655] [pool-1-thread-6] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-28 00:55:23,707] [pool-1-thread-12] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-10-28 00:55:24,046] [pool-1-thread-2] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-28 00:55:25,019] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-28 00:55:27,383] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-28 00:55:27,831] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-28 00:55:28,527] [pool-1-thread-6] Initializing /data/michael/CELL3.oib: [testng] [2024-10-28 00:55:29,832] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-10-28 00:55:30,594] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-28 00:55:31,750] [pool-1-thread-6] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-28 00:55:33,457] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-28 00:55:57,009] [pool-1-thread-8] Initializing /data/glen/simulstack.oib: [testng] [2024-10-28 00:55:58,012] [pool-1-thread-5] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-28 00:56:04,471] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-28 00:56:04,734] [pool-1-thread-6] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-28 00:56:06,938] [pool-1-thread-12] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-28 00:56:07,222] [pool-1-thread-8] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-28 00:56:07,957] [pool-1-thread-3] Initializing /data/monica/Image0056.oif: [testng] [2024-10-28 00:56:08,378] [pool-1-thread-6] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-28 00:56:09,959] [pool-1-thread-12] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-28 00:56:10,868] [pool-1-thread-6] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-28 00:56:17,339] [pool-1-thread-12] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-10-28 00:56:18,570] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-28 00:56:24,236] [pool-1-thread-12] Initializing /data/glen/111407.oif: [testng] [2024-10-28 00:56:25,684] [pool-1-thread-8] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-28 00:56:34,090] [pool-1-thread-3] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-28 00:56:41,884] [pool-1-thread-6] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-28 00:56:59,363] [pool-1-thread-3] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-28 00:57:02,644] [pool-1-thread-3] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-28 00:57:06,014] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-28 00:57:10,959] [pool-1-thread-3] Initializing /data/glen/Image0002.oif: [testng] [2024-10-28 00:59:24,621] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-28 00:59:26,862] [pool-1-thread-2] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-28 00:59:29,577] [pool-1-thread-2] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-28 01:00:07,252] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-10-28 01:00:10,297] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2024-10-28 01:00:26,744] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-10-28 01:00:44,979] [pool-1-thread-6] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-28 01:00:46,926] [pool-1-thread-6] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-28 01:00:54,383] [pool-1-thread-6] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-10-28 01:00:58,372] [pool-1-thread-6] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-28 01:01:01,219] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-10-28 01:01:03,703] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-28 01:01:08,565] [pool-1-thread-1] Initializing /data/johannes/step2.bmp: [testng] [2024-10-28 01:01:09,802] [pool-1-thread-6] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-28 01:01:11,288] [pool-1-thread-1] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-28 01:01:16,692] [pool-1-thread-6] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-28 01:01:22,085] [pool-1-thread-6] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-28 01:02:33,906] [pool-1-thread-2] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-10-28 01:02:40,124] [pool-1-thread-2] Initializing /data/david/Image0016.oif: [testng] [2024-10-28 01:04:24,829] [pool-1-thread-2] Initializing /data/molly/11OCT2.OIF: [testng] [2024-10-28 01:05:07,207] [pool-1-thread-1] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-28 01:05:08,836] [pool-1-thread-6] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-28 01:05:34,086] [pool-1-thread-6] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-28 01:06:08,077] [pool-1-thread-6] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-28 01:06:13,225] [pool-1-thread-6] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-28 01:06:18,039] [pool-1-thread-6] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-28 01:06:24,872] [pool-1-thread-6] Initializing /data/karl/Image0009.oib: [testng] [2024-10-28 01:06:28,662] [pool-1-thread-6] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-10-28 01:06:34,873] [pool-1-thread-6] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-28 01:07:00,112] [pool-1-thread-12] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-28 01:07:04,701] [pool-1-thread-12] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-28 01:07:11,695] [pool-1-thread-12] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-28 01:07:16,101] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-28 01:07:53,053] [pool-1-thread-1] Initializing /data/aryeh/1h.oib: [testng] [2024-10-28 01:08:01,115] [pool-1-thread-1] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-28 01:08:05,865] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-28 01:08:12,361] [pool-1-thread-1] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-28 01:08:18,871] [pool-1-thread-1] Initializing /data/brian/FLIP.oib: [testng] [2024-10-28 01:08:26,162] [pool-1-thread-1] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-28 01:08:30,762] [pool-1-thread-1] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-28 01:08:34,959] [pool-1-thread-1] Initializing /data/simon/never_worked.oib: [testng] [2024-10-28 01:08:38,758] [pool-1-thread-1] Initializing /data/johannes/step1.bmp: [testng] [2024-10-28 01:08:40,689] [pool-1-thread-1] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-10-28 01:08:48,489] [pool-1-thread-1] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-28 01:08:54,313] [pool-1-thread-1] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-28 01:09:01,296] [pool-1-thread-1] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-28 01:09:10,422] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-10-28 01:09:11,316] [pool-1-thread-7] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-28 01:09:15,820] [pool-1-thread-4] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-10-28 01:09:16,736] [pool-1-thread-7] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-28 01:09:19,865] [pool-1-thread-4] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-28 01:09:20,944] [pool-1-thread-7] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-28 01:09:26,315] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-28 01:09:30,279] [pool-1-thread-7] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-28 01:09:33,705] [pool-1-thread-7] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-28 01:09:38,636] [pool-1-thread-7] Initializing /data/yoshihito/XY.oif: [testng] [2024-10-28 01:10:03,279] [pool-1-thread-7] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-28 01:11:37,623] [pool-1-thread-4] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-28 01:11:42,488] [pool-1-thread-4] Initializing /data/david/Image0016.oib: [testng] [2024-10-28 01:11:46,715] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-28 01:11:48,193] [pool-1-thread-3] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-28 01:12:07,376] [pool-1-thread-4] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-28 01:12:11,948] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-28 01:12:19,792] [pool-1-thread-8] Initializing /data/allan/62909#1.oib: [testng] [2024-10-28 01:12:23,719] [pool-1-thread-8] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-28 01:13:51,193] [pool-1-thread-5] Initializing /data/glen/simulstack.oif: [testng] [2024-10-28 01:14:00,313] [pool-1-thread-9] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-28 01:14:05,736] [pool-1-thread-9] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-28 01:15:31,117] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-28 01:15:34,867] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2024-10-28 01:15:48,664] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-28 01:15:52,564] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-28 01:16:16,529] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-28 01:16:57,987] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-28 01:18:54,697] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-28 01:19:00,211] [pool-1-thread-4] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-28 01:19:04,974] [pool-1-thread-4] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-28 01:19:09,796] [pool-1-thread-4] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-28 01:19:12,713] [pool-1-thread-4] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-28 01:19:19,398] [pool-1-thread-4] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-28 01:19:24,647] [pool-1-thread-4] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-28 01:22:34,064] [pool-1-thread-5] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-28 01:23:15,355] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-28 01:23:20,505] [pool-1-thread-5] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-10-28 01:23:41,538] [pool-1-thread-1] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-28 01:23:45,676] [pool-1-thread-1] Initializing /data/johannes/step4.bmp: [testng] [2024-10-28 01:23:47,651] [pool-1-thread-1] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-28 01:23:49,730] [pool-1-thread-1] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-28 01:23:55,035] [pool-1-thread-1] Initializing /data/johannes/step3.bmp: [testng] [2024-10-28 01:23:57,171] [pool-1-thread-1] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-28 01:24:00,911] [pool-1-thread-1] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-28 01:24:15,420] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-28 01:24:17,439] [pool-1-thread-6] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-28 01:24:22,298] [pool-1-thread-3] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-28 01:25:12,806] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-28 01:25:15,519] [pool-1-thread-1] Initializing /data/jae/Image0001.oib: [testng] [2024-10-28 01:25:21,154] [pool-1-thread-6] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-28 01:25:22,390] [pool-1-thread-1] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-10-28 01:26:21,827] [pool-1-thread-6] Initializing /data/marc/V0606L.oib: [testng] [2024-10-28 01:26:39,311] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-28 01:26:45,757] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 02:16:08,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:16:08,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:08,620 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-28_02-16-08.log] [testng] 02:16:08,620 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3212ff1b - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 87 minutes 14 seconds Finished: SUCCESS