Started by upstream project "BIOFORMATS-test-repo" build number 237 originally caused by: Started by upstream project "Trigger" build number 262 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins2564453467846390661.sh + '[' apng = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_37311_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 03:03:35,161 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:03:35,162 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 03:03:35,162 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:03:35,163 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:03:35,164 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:03:35,164 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:03:35,164 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:03:35,164 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:03:35,165 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:03:35,165 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:03:35,165 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:03:35,165 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:03:35,389 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:03:35,389 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:03:35,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:03:35,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:03:35,424 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:03:35,424 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:03:35,424 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:03:35,425 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:03:35,425 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 03:03:35,426 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 03:03:35,426 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 261 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-28 03:03:35,435] [main] java.version = 1.8.0_342 [testng] 03:03:35,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:03:35,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:35,484 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-28_03-03-35.log] [testng] 03:03:35,486 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-10-28 03:03:35,487] [main] testng.directory = /data [testng] [2024-10-28 03:03:35,488] [main] testng.configDirectory = /config [testng] [2024-10-28 03:03:35,500] [main] testng.multiplier = 1.0 [testng] [2024-10-28 03:03:35,501] [main] testng.in-memory = false [testng] [2024-10-28 03:03:35,501] [main] testng.allow-missing = false [testng] [2024-10-28 03:03:35,501] [main] user.language = fr [testng] [2024-10-28 03:03:35,501] [main] user.country = FR [testng] [2024-10-28 03:03:35,501] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-28 03:03:36,207] [main] ---------------------------------------- [testng] [2024-10-28 03:03:36,207] [main] Total files: 21 [testng] [2024-10-28 03:03:36,207] [main] Scan time: 0.705 s (33 ms/file) [testng] [2024-10-28 03:03:36,207] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-28 03:03:38,229] [pool-1-thread-1] Initializing /data/samples/daniel_coltri_two.png: [testng] 03:03:38,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:03:38,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:38,230 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-28_03-03-38.log] [testng] 03:03:38,231 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e5b3058 - End of configuration. [testng] [2024-10-28 03:03:38,293] [pool-1-thread-12] Initializing /data/samples/atom.png: [testng] 03:03:38,293 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:03:38,293 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:38,294 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-28_03-03-38.log] [testng] 03:03:38,294 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28094f36 - End of configuration. [testng] [2024-10-28 03:03:38,322] [pool-1-thread-11] Initializing /data/colin/test.sfstdge.png: [testng] 03:03:38,322 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:03:38,322 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:38,323 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-28_03-03-38.log] [testng] 03:03:38,324 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f3b7de6 - End of configuration. [testng] [2024-10-28 03:03:38,351] [pool-1-thread-10] Initializing /data/samples/william_wong01.png: [testng] 03:03:38,351 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:03:38,351 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:38,352 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-28_03-03-38.log] [testng] 03:03:38,352 |-INFO in ch.qos.logback.core.sift.SiftProcessor@682b50e6 - End of configuration. [testng] [2024-10-28 03:03:38,382] [pool-1-thread-9] Initializing /data/samples/william_wong05.png: [testng] 03:03:38,383 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:03:38,383 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:38,383 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-28_03-03-38.log] [testng] 03:03:38,384 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3684889 - End of configuration. [testng] [2024-10-28 03:03:38,414] [pool-1-thread-8] Initializing /data/qa-7473/n.tif: [testng] 03:03:38,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:03:38,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:38,415 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-28_03-03-38.log] [testng] 03:03:38,416 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49dbd773 - End of configuration. [testng] [2024-10-28 03:03:38,906] [pool-1-thread-7] Initializing /data/samples/monkey_apng.png: [testng] 03:03:38,906 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:03:38,906 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:38,907 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-28_03-03-38.log] [testng] 03:03:38,907 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55a1a835 - End of configuration. [testng] [2024-10-28 03:03:38,929] [pool-1-thread-6] Initializing /data/samples/phug_logo.png: [testng] 03:03:38,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:03:38,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:38,930 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-28_03-03-38.log] [testng] 03:03:38,930 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ff9a1ac - End of configuration. [testng] [2024-10-28 03:03:38,958] [pool-1-thread-5] Initializing /data/samples/spinfox.png: [testng] 03:03:38,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:03:38,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:38,959 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-28_03-03-38.log] [testng] 03:03:38,959 |-INFO in ch.qos.logback.core.sift.SiftProcessor@715fd203 - End of configuration. [testng] [2024-10-28 03:03:38,986] [pool-1-thread-4] Initializing /data/samples/MoonPhases.png: [testng] 03:03:38,986 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:03:38,987 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:38,987 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-28_03-03-38.log] [testng] 03:03:38,988 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55979d66 - End of configuration. [testng] [2024-10-28 03:03:39,014] [pool-1-thread-3] Initializing /data/samples/orbit.png: [testng] 03:03:39,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:03:39,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:39,015 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-28_03-03-39.log] [testng] 03:03:39,016 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f2dcad7 - End of configuration. [testng] [2024-10-28 03:03:39,044] [pool-1-thread-2] Initializing /data/samples/joanna_viera01.png: [testng] 03:03:39,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:03:39,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:03:39,045 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-28_03-03-39.log] [testng] 03:03:39,046 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f71cfeb - End of configuration. [testng] [2024-10-28 03:03:41,017] [pool-1-thread-9] Initializing /data/qa-7473/x.png: [testng] [2024-10-28 03:03:41,031] [pool-1-thread-11] Initializing /data/samples/PhugAnimation3.png: [testng] [2024-10-28 03:03:41,048] [pool-1-thread-12] Initializing /data/samples/StarV838.png: [testng] [2024-10-28 03:03:41,063] [pool-1-thread-4] Initializing /data/samples/chompy2.png: [testng] [2024-10-28 03:03:41,074] [pool-1-thread-6] Initializing /data/samples/william_wong02.png: [testng] [2024-10-28 03:03:41,103] [pool-1-thread-3] Initializing /data/samples/daniel_coltri_one.png: [testng] [2024-10-28 03:03:41,120] [pool-1-thread-5] Initializing /data/samples/william_wong04.png: [testng] [2024-10-28 03:03:41,132] [pool-1-thread-10] Initializing /data/samples/Sun.png: [testng] [2024-10-28 03:03:41,149] [pool-1-thread-7] Initializing /data/samples/Matrix.png: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 12 seconds Finished: SUCCESS