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Started by upstream project "BIOFORMATS-test-repo" build number 29
originally caused by:
 Started by upstream project "Trigger" build number 32
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins18278404551482258058.sh
+ '[' targa = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_3782_merge_ci -v /uod/idr/repos/curated/targa:/data -v /uod/idr-scratch/merge-ci/curated/targa:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:25:50,734 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:25:50,736 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:25:50,736 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:25:50,737 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:25:50,737 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:25:50,737 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:25:50,738 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:25:50,738 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:25:50,738 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:25:50,738 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:25:50,739 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:25:50,739 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:25:50,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:25:50,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:25:50,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:25:50,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:25:50,929 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:25:50,929 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:25:50,929 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:25:50,930 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:25:50,930 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:25:50,930 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:25:50,930 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 192 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-04-10 01:25:50,939] [main] java.version = 17.0.2
   [testng] 01:25:50,942 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:25:50,942 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:50,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-10_01-25-50.log]
   [testng] 01:25:50,983 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-04-10 01:25:50,985] [main] testng.directory = /data
   [testng] [2024-04-10 01:25:50,986] [main] testng.configDirectory = /config
   [testng] [2024-04-10 01:25:50,994] [main] testng.multiplier = 1.0
   [testng] [2024-04-10 01:25:50,995] [main] testng.in-memory = false
   [testng] [2024-04-10 01:25:50,995] [main] testng.allow-missing = false
   [testng] [2024-04-10 01:25:50,995] [main] user.language = en
   [testng] [2024-04-10 01:25:50,995] [main] user.country = ${user.country}
   [testng] [2024-04-10 01:25:50,995] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-04-10 01:25:51,337] [main] ----------------------------------------
   [testng] [2024-04-10 01:25:51,338] [main] Total files: 21
   [testng] [2024-04-10 01:25:51,338] [main] Scan time: 0.342 s (16 ms/file)
   [testng] [2024-04-10 01:25:51,338] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 21 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-04-10 01:25:52,094] [pool-1-thread-1] Initializing /data/samples/UTC16.TGA: 
   [testng] 01:25:52,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:25:52,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,096 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-10_01-25-52.log]
   [testng] 01:25:52,096 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e71229e - End of configuration.
   [testng] [2024-04-10 01:25:52,111] [pool-1-thread-12] Initializing /data/samples/CTC24.TGA: 
   [testng] 01:25:52,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:25:52,112 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,113 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-10_01-25-52.log]
   [testng] 01:25:52,113 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35ae24b8 - End of configuration.
   [testng] [2024-04-10 01:25:52,164] [pool-1-thread-11] Initializing /data/samples/UCM8.TGA: 
   [testng] 01:25:52,165 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:25:52,165 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,166 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-10_01-25-52.log]
   [testng] 01:25:52,166 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c6d0e83 - End of configuration.
   [testng] [2024-04-10 01:25:52,175] [pool-1-thread-10] Initializing /data/samples/FLAG_B16.TGA: 
   [testng] 01:25:52,175 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:25:52,175 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,176 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-10_01-25-52.log]
   [testng] 01:25:52,177 |-INFO in ch.qos.logback.core.sift.SiftProcessor@386870bb - End of configuration.
   [testng] [2024-04-10 01:25:52,186] [pool-1-thread-9] Initializing /data/samples/XING_T16.TGA: 
   [testng] 01:25:52,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:25:52,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-10_01-25-52.log]
   [testng] 01:25:52,188 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64a0f473 - End of configuration.
   [testng] [2024-04-10 01:25:52,200] [pool-1-thread-8] Initializing /data/samples/UBW8.TGA: 
   [testng] 01:25:52,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:25:52,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,202 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-10_01-25-52.log]
   [testng] 01:25:52,202 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25d4b6f0 - End of configuration.
   [testng] [2024-04-10 01:25:52,211] [pool-1-thread-7] Initializing /data/samples/MARBLES.TGA: 
   [testng] 01:25:52,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:25:52,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,212 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-10_01-25-52.log]
   [testng] 01:25:52,213 |-INFO in ch.qos.logback.core.sift.SiftProcessor@881d484 - End of configuration.
   [testng] [2024-04-10 01:25:52,228] [pool-1-thread-6] Initializing /data/samples/UTC32.TGA: 
   [testng] 01:25:52,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:25:52,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,230 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-10_01-25-52.log]
   [testng] 01:25:52,230 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fdce4b4 - End of configuration.
   [testng] [2024-04-10 01:25:52,241] [pool-1-thread-5] Initializing /data/samples/CCM8.TGA: 
   [testng] 01:25:52,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:25:52,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,242 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-10_01-25-52.log]
   [testng] 01:25:52,243 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6732c003 - End of configuration.
   [testng] [2024-04-10 01:25:52,254] [pool-1-thread-4] Initializing /data/samples/FLAG_B24.TGA: 
   [testng] 01:25:52,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:25:52,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,255 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-10_01-25-52.log]
   [testng] 01:25:52,256 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31caf268 - End of configuration.
   [testng] [2024-04-10 01:25:52,264] [pool-1-thread-3] Initializing /data/samples/XING_B32.TGA: 
   [testng] 01:25:52,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:25:52,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,266 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-10_01-25-52.log]
   [testng] 01:25:52,266 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55c94bd5 - End of configuration.
   [testng] [2024-04-10 01:25:52,278] [pool-1-thread-2] Initializing /data/samples/XING_T24.TGA: 
   [testng] 01:25:52,278 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:25:52,279 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:52,279 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-10_01-25-52.log]
   [testng] 01:25:52,280 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f2e83c5 - End of configuration.
   [testng] [2024-04-10 01:25:53,761] [pool-1-thread-4] Initializing /data/samples/CBW8.TGA: 
   [testng] [2024-04-10 01:25:53,770] [pool-1-thread-1] Initializing /data/samples/UTC24.TGA: 
   [testng] [2024-04-10 01:25:53,777] [pool-1-thread-11] Initializing /data/samples/CTC16.TGA: 
   [testng] [2024-04-10 01:25:53,784] [pool-1-thread-5] Initializing /data/samples/FLAG_B32.TGA: 
   [testng] [2024-04-10 01:25:53,791] [pool-1-thread-8] Initializing /data/samples/XING_B24.TGA: 
   [testng] [2024-04-10 01:25:53,799] [pool-1-thread-6] Initializing /data/samples/XING_B16.TGA: 
   [testng] [2024-04-10 01:25:53,807] [pool-1-thread-2] Initializing /data/samples/FLAG_T32.TGA: 
   [testng] [2024-04-10 01:25:53,815] [pool-1-thread-9] Initializing /data/samples/FLAG_T16.TGA: 
   [testng] [2024-04-10 01:25:53,823] [pool-1-thread-3] Initializing /data/samples/XING_T32.TGA: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1113, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 8 seconds
Finished: SUCCESS