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Started by upstream project "BIOFORMATS-test-repo" build number 241 originally caused by: Started by upstream project "Trigger" build number 266 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins17039059671378989768.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_37851_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:22:21,971 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:22:21,973 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:22:21,973 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:21,974 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:21,974 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:22:21,974 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:22:21,974 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:22:21,974 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:21,975 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:21,975 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:22:21,975 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:22:21,976 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:22:22,217 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:22:22,218 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:22:22,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:22:22,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:22:22,259 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:22:22,259 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:22:22,259 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:22:22,260 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:22:22,260 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:22:22,261 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:22:22,261 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 286 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-01 00:22:22,271] [main] java.version = 1.8.0_342 [testng] 00:22:22,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:22:22,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:22,325 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-01_00-22-22.log] [testng] 00:22:22,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-11-01 00:22:22,329] [main] testng.directory = /data [testng] [2024-11-01 00:22:22,330] [main] testng.configDirectory = /config [testng] [2024-11-01 00:22:22,343] [main] testng.multiplier = 1.0 [testng] [2024-11-01 00:22:22,343] [main] testng.in-memory = false [testng] [2024-11-01 00:22:22,344] [main] testng.allow-missing = false [testng] [2024-11-01 00:22:22,344] [main] user.language = en [testng] [2024-11-01 00:22:22,344] [main] user.country = ${user.country} [testng] [2024-11-01 00:22:22,344] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-11-01 00:22:47,836] [main] ---------------------------------------- [testng] [2024-11-01 00:22:47,836] [main] Total files: 315 [testng] [2024-11-01 00:22:47,836] [main] Scan time: 25.492 s (80 ms/file) [testng] [2024-11-01 00:22:47,836] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 192 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-01 00:33:52,825] [pool-1-thread-1] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] 00:33:52,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:33:52,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:52,826 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-01_00-33-52.log] [testng] 00:33:52,827 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49e7de25 - End of configuration. [testng] [2024-11-01 00:34:53,575] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir: [testng] 00:34:53,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:34:53,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:53,576 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-01_00-34-53.log] [testng] 00:34:53,577 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4871188a - End of configuration. [testng] [2024-11-01 00:34:55,474] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] 00:34:55,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:34:55,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:55,475 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-01_00-34-55.log] [testng] 00:34:55,476 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b327d96 - End of configuration. [testng] [2024-11-01 00:34:55,715] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] 00:34:55,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:34:55,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:55,717 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-01_00-34-55.log] [testng] 00:34:55,717 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18124cdf - End of configuration. [testng] [2024-11-01 00:34:56,199] [pool-1-thread-9] Initializing /data/qa-17919/f10187.oir: [testng] 00:34:56,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:34:56,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:56,200 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-01_00-34-56.log] [testng] 00:34:56,200 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8290c2e - End of configuration. [testng] [2024-11-01 00:35:16,558] [pool-1-thread-8] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] 00:35:16,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:35:16,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:16,559 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-01_00-35-16.log] [testng] 00:35:16,560 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43dbcb19 - End of configuration. [testng] [2024-11-01 00:35:18,110] [pool-1-thread-7] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] 00:35:18,110 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:35:18,110 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:18,110 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-01_00-35-18.log] [testng] 00:35:18,111 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ece4ded - End of configuration. [testng] [2024-11-01 00:35:19,296] [pool-1-thread-6] Initializing /data/qa-17270/image1.oir: [testng] 00:35:19,296 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:35:19,296 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:19,296 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-01_00-35-19.log] [testng] 00:35:19,297 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f4ab32a - End of configuration. [testng] [2024-11-01 00:35:19,880] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] 00:35:19,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:35:19,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:19,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-01_00-35-19.log] [testng] 00:35:19,881 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b74e3a5 - End of configuration. [testng] [2024-11-01 00:35:21,124] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] 00:35:21,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:35:21,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:21,125 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-01_00-35-21.log] [testng] 00:35:21,125 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41b5fb75 - End of configuration. [testng] [2024-11-01 00:35:22,433] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] 00:35:22,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:35:22,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:22,434 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-01_00-35-22.log] [testng] 00:35:22,434 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78ed8588 - End of configuration. [testng] [2024-11-01 00:35:23,174] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] 00:35:23,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:35:23,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:23,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-01_00-35-23.log] [testng] 00:35:23,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a376485 - End of configuration. [testng] [2024-11-01 00:35:31,318] [pool-1-thread-11] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-11-01 00:35:31,736] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2024-11-01 00:35:32,623] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-11-01 00:35:33,639] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-11-01 00:35:34,891] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-11-01 00:35:35,519] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-11-01 00:35:36,122] [pool-1-thread-5] Initializing /data/olympus/Stitched_XYZ.ome.tif: [testng] [2024-11-01 00:35:42,961] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-11-01 00:35:43,879] [pool-1-thread-10] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-11-01 00:35:44,763] [pool-1-thread-8] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-11-01 00:35:45,833] [pool-1-thread-4] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2024-11-01 00:35:46,435] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2024-11-01 00:35:47,047] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-11-01 00:35:47,921] [pool-1-thread-5] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-11-01 00:35:51,716] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-11-01 00:35:53,947] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-11-01 00:35:56,297] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-11-01 00:35:58,360] [pool-1-thread-7] Initializing /data/olympus/XYZt.oir: [testng] [2024-11-01 00:36:02,221] [pool-1-thread-8] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-11-01 00:36:03,593] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-11-01 00:36:04,351] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-11-01 00:36:04,978] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] [2024-11-01 00:36:10,256] [pool-1-thread-3] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-11-01 00:36:12,813] [pool-1-thread-2] Initializing /data/qa-17922/example_multipart.oir: [testng] [2024-11-01 00:36:47,368] [pool-1-thread-10] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2024-11-01 00:36:48,236] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-11-01 00:36:51,816] [pool-1-thread-12] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir: [testng] [2024-11-01 00:36:52,836] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2024-11-01 00:36:55,642] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2024-11-01 00:36:56,191] [pool-1-thread-11] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-11-01 00:37:00,949] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-11-01 00:37:02,502] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-11-01 00:37:06,450] [pool-1-thread-5] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-11-01 00:37:09,205] [pool-1-thread-10] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-11-01 00:37:10,574] [pool-1-thread-4] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-11-01 00:37:12,409] [pool-1-thread-12] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-11-01 00:37:13,718] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-11-01 00:37:18,831] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2024-11-01 00:37:20,143] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-11-01 00:37:21,549] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-11-01 00:37:24,996] [pool-1-thread-6] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2024-11-01 00:37:26,306] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-11-01 00:37:27,419] [pool-1-thread-12] Initializing 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red tubulin green 60x_0002.oir: [testng] [2024-11-01 00:44:27,127] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-11-01 00:44:34,342] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-11-01 00:44:36,498] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-11-01 00:44:38,554] [pool-1-thread-5] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-11-01 00:44:39,717] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-11-01 00:44:40,961] [pool-1-thread-4] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-11-01 00:45:13,785] [pool-1-thread-7] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-11-01 00:45:18,759] [pool-1-thread-5] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-11-01 00:45:23,221] [pool-1-thread-5] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-11-01 00:46:06,924] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-11-01 00:46:13,223] [pool-1-thread-7] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2024-11-01 00:46:20,727] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-11-01 00:46:24,492] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-11-01 00:46:25,495] [pool-1-thread-12] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-11-01 00:46:26,024] [pool-1-thread-12] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-11-01 00:46:30,223] [pool-1-thread-3] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir: [testng] [2024-11-01 00:46:50,684] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2024-11-01 00:47:05,723] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2024-11-01 00:47:08,280] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2024-11-01 00:47:10,250] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-11-01 00:47:12,020] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] 01:36:01,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:36:01,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:36:01,787 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-01_01-36-01.log] [testng] 01:36:01,787 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d61b259 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10176, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 73 minutes 43 seconds Finished: SUCCESS