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Started by upstream project "BIOFORMATS-test-repo" build number 241 originally caused by: Started by upstream project "Trigger" build number 266 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins1083467837867006860.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_37969_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 03:05:49,148 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:05:49,150 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 03:05:49,150 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:05:49,151 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:05:49,151 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:05:49,151 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:05:49,152 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:05:49,152 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:05:49,152 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:05:49,152 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:05:49,153 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:05:49,153 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:05:49,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:05:49,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:05:49,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:05:49,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:05:49,417 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:05:49,417 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:05:49,417 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:05:49,417 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:05:49,418 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 03:05:49,418 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 03:05:49,418 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 266 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-01 03:05:49,428] [main] java.version = 1.8.0_342 [testng] 03:05:49,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:05:49,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:05:49,477 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-01_03-05-49.log] [testng] 03:05:49,479 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-11-01 03:05:49,481] [main] testng.directory = /data [testng] [2024-11-01 03:05:49,481] [main] testng.configDirectory = /config [testng] [2024-11-01 03:05:49,493] [main] testng.multiplier = 1.0 [testng] [2024-11-01 03:05:49,493] [main] testng.in-memory = false [testng] [2024-11-01 03:05:49,494] [main] testng.allow-missing = false [testng] [2024-11-01 03:05:49,494] [main] user.language = en [testng] [2024-11-01 03:05:49,494] [main] user.country = ${user.country} [testng] [2024-11-01 03:05:49,494] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-11-01 03:07:19,954] [main] ---------------------------------------- [testng] [2024-11-01 03:07:19,954] [main] Total files: 15735 [testng] [2024-11-01 03:07:19,954] [main] Scan time: 90.46 s (5 ms/file) [testng] [2024-11-01 03:07:19,954] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-01 03:09:12,396] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] 03:09:12,397 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:09:12,397 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:12,398 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-01_03-09-12.log] [testng] 03:09:12,398 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e8b2e8 - End of configuration. [testng] [2024-11-01 03:09:12,808] [pool-1-thread-12] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] 03:09:12,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:09:12,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:12,809 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-01_03-09-12.log] [testng] 03:09:12,810 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ef849fc - End of configuration. [testng] [2024-11-01 03:09:13,204] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 03:09:13,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:09:13,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:13,205 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-01_03-09-13.log] [testng] 03:09:13,205 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19417eca - End of configuration. [testng] [2024-11-01 03:09:13,626] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif: [testng] 03:09:13,626 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:09:13,626 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:13,627 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-01_03-09-13.log] [testng] 03:09:13,627 |-INFO in ch.qos.logback.core.sift.SiftProcessor@488005b7 - End of configuration. [testng] [2024-11-01 03:09:13,996] [pool-1-thread-9] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] 03:09:13,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:09:13,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:13,997 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-01_03-09-13.log] [testng] 03:09:13,997 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1194e1eb - End of configuration. [testng] [2024-11-01 03:09:14,503] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif: [testng] 03:09:14,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:09:14,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:14,504 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-01_03-09-14.log] [testng] 03:09:14,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@413ad5e5 - End of configuration. [testng] [2024-11-01 03:09:14,949] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 03:09:14,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:09:14,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:14,950 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-01_03-09-14.log] [testng] 03:09:14,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49812d46 - End of configuration. [testng] [2024-11-01 03:09:15,515] [pool-1-thread-6] Initializing /data/converted/dietmar/138.tif: [testng] 03:09:15,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:09:15,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:15,516 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-01_03-09-15.log] [testng] 03:09:15,516 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a8d2915 - End of configuration. [testng] [2024-11-01 03:09:16,042] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] 03:09:16,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:09:16,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:16,044 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-01_03-09-16.log] [testng] 03:09:16,044 |-INFO in ch.qos.logback.core.sift.SiftProcessor@414e1750 - End of configuration. [testng] [2024-11-01 03:09:17,311] [pool-1-thread-4] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 03:09:17,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:09:17,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:17,312 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-01_03-09-17.log] [testng] 03:09:17,312 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6dcd6f74 - End of configuration. [testng] [2024-11-01 03:09:17,808] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] 03:09:17,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:09:17,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:17,809 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-01_03-09-17.log] [testng] 03:09:17,809 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cc15a24 - End of configuration. [testng] [2024-11-01 03:09:18,200] [pool-1-thread-2] Initializing /data/converted/converted/damian.tif: [testng] 03:09:18,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:09:18,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:18,200 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-01_03-09-18.log] [testng] 03:09:18,201 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dfa65ee - End of configuration. [testng] [2024-11-01 03:09:34,741] [pool-1-thread-3] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-11-01 03:09:36,026] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-11-01 03:09:37,228] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-11-01 03:09:38,153] [pool-1-thread-10] Initializing /data/scott/Slide133-04.tif: [testng] [2024-11-01 03:09:53,712] [pool-1-thread-3] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-11-01 03:09:58,723] [pool-1-thread-10] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-11-01 03:10:07,052] [pool-1-thread-12] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-11-01 03:10:15,797] [pool-1-thread-3] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-11-01 03:10:21,492] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-11-01 03:11:06,627] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-11-01 03:11:23,496] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif: [testng] [2024-11-01 03:11:27,338] [pool-1-thread-8] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-11-01 03:11:29,356] [pool-1-thread-4] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-11-01 03:11:41,434] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-11-01 03:11:44,040] [pool-1-thread-8] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-11-01 03:11:55,042] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-11-01 03:11:57,181] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-11-01 03:12:03,457] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-11-01 03:12:08,931] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-11-01 03:12:53,298] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-11-01 03:13:04,741] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-11-01 03:13:06,463] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-11-01 03:13:17,053] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-11-01 03:13:22,317] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-11-01 03:13:25,470] [pool-1-thread-7] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-11-01 03:13:54,628] [pool-1-thread-2] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-11-01 03:14:33,611] [pool-1-thread-8] Initializing /data/othmar/mozaic.tif: [testng] [2024-11-01 03:15:37,676] [pool-1-thread-9] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-11-01 03:16:57,506] [pool-1-thread-10] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-11-01 03:17:08,860] [pool-1-thread-11] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-11-01 03:18:18,500] [pool-1-thread-8] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-11-01 03:18:38,069] [pool-1-thread-4] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-11-01 03:18:52,251] [pool-1-thread-8] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-11-01 03:19:13,554] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-11-01 03:20:01,068] [pool-1-thread-6] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-11-01 03:20:39,366] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif: [testng] [2024-11-01 03:21:06,183] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-11-01 03:21:09,412] [pool-1-thread-11] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-11-01 03:21:10,934] [pool-1-thread-6] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-11-01 03:21:41,109] [pool-1-thread-11] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-11-01 03:25:17,632] [pool-1-thread-11] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-11-01 03:25:53,287] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-11-01 03:28:11,689] [pool-1-thread-7] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-11-01 03:28:41,488] [pool-1-thread-4] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-11-01 03:28:53,447] [pool-1-thread-2] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-11-01 03:29:10,837] [pool-1-thread-5] Initializing /data/converted/dietmar/137.tif: [testng] [2024-11-01 03:29:17,651] [pool-1-thread-2] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-11-01 03:29:20,293] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-11-01 03:31:29,010] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-11-01 03:34:01,453] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-11-01 03:34:22,370] [pool-1-thread-9] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-11-01 03:35:17,795] [pool-1-thread-8] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-11-01 03:36:18,110] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-11-01 03:36:31,293] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-11-01 03:36:47,862] [pool-1-thread-9] Initializing /data/converted/sebastien/test.tif: [testng] [2024-11-01 03:38:32,514] [pool-1-thread-10] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-11-01 03:39:33,240] [pool-1-thread-4] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-11-01 03:40:22,945] [pool-1-thread-3] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-11-01 03:40:36,758] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-11-01 03:42:35,744] [pool-1-thread-3] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-11-01 03:43:34,489] [pool-1-thread-1] Initializing /data/converted/michel/c.tif: [testng] [2024-11-01 03:43:50,357] [pool-1-thread-5] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-11-01 03:44:15,910] [pool-1-thread-1] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-11-01 03:44:37,093] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-11-01 03:44:38,992] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-11-01 03:44:47,934] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-11-01 03:45:12,068] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-11-01 03:45:22,154] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-11-01 03:46:07,537] [pool-1-thread-9] Initializing /data/converted/michel/e.tif: [testng] [2024-11-01 03:46:35,775] [pool-1-thread-4] Initializing /data/converted/nicolas/image.tif: [testng] [2024-11-01 03:47:00,415] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-11-01 03:47:05,711] [pool-1-thread-9] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-11-01 03:47:42,853] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-11-01 03:47:56,589] [pool-1-thread-10] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-11-01 03:50:16,729] [pool-1-thread-10] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-11-01 03:50:46,953] [pool-1-thread-10] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-11-01 03:51:42,558] [pool-1-thread-10] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-11-01 03:51:48,734] [pool-1-thread-11] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-11-01 03:52:05,004] [pool-1-thread-7] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-11-01 03:52:12,495] [pool-1-thread-10] Initializing /data/converted/michel/a.tif: [testng] [2024-11-01 03:52:21,376] [pool-1-thread-3] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-11-01 03:52:30,205] [pool-1-thread-11] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-11-01 03:52:36,970] [pool-1-thread-10] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-11-01 03:52:47,160] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-11-01 03:52:52,696] [pool-1-thread-7] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-11-01 03:52:57,646] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-11-01 03:53:04,583] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-11-01 03:53:06,514] [pool-1-thread-8] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-11-01 03:53:25,130] [pool-1-thread-7] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-11-01 03:53:57,982] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-11-01 03:54:08,937] [pool-1-thread-4] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-11-01 03:54:23,589] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-11-01 03:55:01,878] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-11-01 03:55:49,338] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-11-01 03:59:27,832] [pool-1-thread-4] Initializing /data/converted/michel/b.tif: [testng] [2024-11-01 03:59:37,225] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-11-01 04:00:04,248] [pool-1-thread-4] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-11-01 04:00:31,919] [pool-1-thread-10] Initializing /data/converted/michel/d.tif: [testng] [2024-11-01 04:00:44,647] [pool-1-thread-1] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-11-01 04:00:55,951] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-11-01 04:01:06,422] [pool-1-thread-10] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-11-01 04:01:16,374] [pool-1-thread-1] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-11-01 04:01:25,527] [pool-1-thread-1] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-11-01 04:01:33,065] [pool-1-thread-2] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-11-01 04:01:39,103] [pool-1-thread-8] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-11-01 04:01:40,737] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-11-01 04:01:53,586] [pool-1-thread-10] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-11-01 04:02:07,746] [pool-1-thread-5] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-11-01 04:02:10,493] [pool-1-thread-11] Initializing /data/scott/Slide133-08.tif: [testng] [2024-11-01 04:02:26,498] [pool-1-thread-5] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-11-01 04:02:34,003] [pool-1-thread-11] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-11-01 04:02:51,989] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-11-01 04:02:59,684] [pool-1-thread-11] Initializing /data/converted/lior/live+cf5b.tif: [testng] 04:35:34,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:35:34,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:35:34,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-01_04-35-34.log] [testng] 04:35:34,649 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e84be9b - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 89 minutes 48 seconds Finished: SUCCESS