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Started by upstream project "BIOFORMATS-test-repo" build number 242 originally caused by: Started by upstream project "Trigger" build number 267 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins6622870145928333586.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_38016_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:21:56,343 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:21:56,344 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 00:21:56,344 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:56,345 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:56,346 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:21:56,346 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:21:56,347 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:21:56,347 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:56,347 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:56,348 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:21:56,348 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:21:56,348 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:21:56,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:21:56,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:21:56,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:21:56,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:21:56,549 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:21:56,549 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:21:56,550 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:21:56,550 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:21:56,550 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 00:21:56,551 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 00:21:56,551 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 204 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-02 00:21:56,560] [main] java.version = 11.0.16 [testng] 00:21:56,563 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:21:56,563 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:56,606 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-02_00-21-56.log] [testng] 00:21:56,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-11-02 00:21:56,610] [main] testng.directory = /data [testng] [2024-11-02 00:21:56,610] [main] testng.configDirectory = /config [testng] [2024-11-02 00:21:56,620] [main] testng.multiplier = 1.0 [testng] [2024-11-02 00:21:56,621] [main] testng.in-memory = false [testng] [2024-11-02 00:21:56,621] [main] testng.allow-missing = false [testng] [2024-11-02 00:21:56,621] [main] user.language = en [testng] [2024-11-02 00:21:56,621] [main] user.country = ${user.country} [testng] [2024-11-02 00:21:56,621] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-02 00:22:38,829] [main] ---------------------------------------- [testng] [2024-11-02 00:22:38,830] [main] Total files: 4426 [testng] [2024-11-02 00:22:38,830] [main] Scan time: 42.208 s (9 ms/file) [testng] [2024-11-02 00:22:38,831] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-02 00:34:57,363] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] 00:34:57,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:34:57,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:57,366 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-02_00-34-57.log] [testng] 00:34:57,367 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29707a77 - End of configuration. [testng] [2024-11-02 00:34:57,995] [pool-1-thread-12] Initializing /data/misc/wtembryo.tiff: [testng] 00:34:57,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:34:57,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:57,996 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-02_00-34-57.log] [testng] 00:34:57,996 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6dfbe8f3 - End of configuration. [testng] [2024-11-02 00:34:58,413] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] 00:34:58,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:34:58,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:58,414 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-02_00-34-58.log] [testng] 00:34:58,414 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fd28492 - End of configuration. [testng] [2024-11-02 00:34:58,769] [pool-1-thread-10] Initializing /data/brian/Alx-488-pk.tif: [testng] 00:34:58,769 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:34:58,769 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:58,770 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-02_00-34-58.log] [testng] 00:34:58,770 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6afab3d - End of configuration. [testng] [2024-11-02 00:34:59,086] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] 00:34:59,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:34:59,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:59,087 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-02_00-34-59.log] [testng] 00:34:59,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e4f618b - End of configuration. [testng] [2024-11-02 00:34:59,443] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] 00:34:59,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:34:59,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:59,444 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-02_00-34-59.log] [testng] 00:34:59,444 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7de21b25 - End of configuration. [testng] [2024-11-02 00:35:00,042] [pool-1-thread-7] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] 00:35:00,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:35:00,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:00,043 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-02_00-35-00.log] [testng] 00:35:00,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cd254e - End of configuration. [testng] [2024-11-02 00:35:03,634] [pool-1-thread-6] Initializing /data/public/libtiff/oxford.tif: [testng] 00:35:03,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:35:03,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:03,635 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-02_00-35-03.log] [testng] 00:35:03,635 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71c75587 - End of configuration. [testng] [2024-11-02 00:35:04,707] [pool-1-thread-5] Initializing /data/brian/Ch1_fld1.tif: [testng] 00:35:04,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:35:04,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:04,709 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-02_00-35-04.log] [testng] 00:35:04,710 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63385532 - End of configuration. [testng] [2024-11-02 00:35:05,676] [pool-1-thread-4] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] 00:35:05,676 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:35:05,676 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:05,677 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-02_00-35-05.log] [testng] 00:35:05,678 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b4d528 - End of configuration. [testng] [2024-11-02 00:35:06,627] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] 00:35:06,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:35:06,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:06,628 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-02_00-35-06.log] [testng] 00:35:06,629 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b02a5c2 - End of configuration. [testng] [2024-11-02 00:35:07,410] [pool-1-thread-2] Initializing /data/jae/first image.tif: [testng] 00:35:07,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:35:07,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:07,411 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-02_00-35-07.log] [testng] 00:35:07,412 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68d58255 - End of configuration. [testng] [2024-11-02 00:35:15,040] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-11-02 00:35:16,226] [pool-1-thread-6] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-11-02 00:35:17,080] [pool-1-thread-11] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-11-02 00:35:18,381] [pool-1-thread-1] Initializing /data/big-images/2kx2k.tif: [testng] [2024-11-02 00:35:19,919] [pool-1-thread-8] Initializing /data/josiah/cell-Z9.C0.tiff: [testng] [2024-11-02 00:35:21,157] [pool-1-thread-10] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-11-02 00:35:22,493] [pool-1-thread-3] Initializing /data/josiah/cell-Z10.C0.tiff: [testng] [2024-11-02 00:35:23,703] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-11-02 00:35:24,407] [pool-1-thread-12] Initializing /data/josiah/cell-Z6.C1.tiff: [testng] [2024-11-02 00:35:25,273] [pool-1-thread-9] Initializing /data/josiah/cell-Z20.C0.tiff: [testng] [2024-11-02 00:35:33,936] [pool-1-thread-4] Initializing /data/public/condensation/E4.pattern7.tif: [testng] [2024-11-02 00:35:35,508] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-11-02 00:35:36,691] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-11-02 00:35:37,785] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] [2024-11-02 00:35:38,995] [pool-1-thread-6] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-11-02 00:35:40,127] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x64.tiff: [testng] [2024-11-02 00:35:41,199] [pool-1-thread-10] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-11-02 00:35:42,218] [pool-1-thread-12] Initializing /data/kevino/_BF_00004.tif: [testng] [2024-11-02 00:35:43,306] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-11-02 00:35:44,413] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-11-02 00:35:53,489] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-11-02 00:35:54,645] [pool-1-thread-3] Initializing /data/wayne/mBoeglin_lzw/mm_7.1.2.0.tif: [testng] [2024-11-02 00:35:55,231] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-11-02 00:35:56,378] [pool-1-thread-1] Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-11-02 00:35:57,706] [pool-1-thread-10] Initializing /data/tom/TLD - n000000_Stamp.tif: [testng] [2024-11-02 00:35:59,256] [pool-1-thread-8] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-11-02 00:36:00,435] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-11-02 00:36:01,617] [pool-1-thread-12] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-11-02 00:36:02,984] [pool-1-thread-11] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-11-02 00:36:04,618] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-11-02 00:36:06,164] [pool-1-thread-5] Initializing /data/glen/742015a20x3middle16bit.tif: [testng] [2024-11-02 00:36:08,060] [pool-1-thread-7] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-11-02 00:36:14,200] [pool-1-thread-4] Initializing /data/public/condensation/B12.pattern2.tif: [testng] [2024-11-02 00:36:15,239] [pool-1-thread-9] Initializing /data/tamjid/Image_843.tif: [testng] [2024-11-02 00:36:16,223] [pool-1-thread-3] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-11-02 00:36:17,146] [pool-1-thread-8] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-11-02 00:36:20,783] [pool-1-thread-2] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-11-02 00:36:21,798] [pool-1-thread-10] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-11-02 00:36:22,744] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-11-02 00:36:23,484] [pool-1-thread-12] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-11-02 00:36:24,231] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-11-02 00:36:24,931] [pool-1-thread-11] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-11-02 00:36:25,549] [pool-1-thread-7] Initializing /data/ascb/CYT-49_FriendSecretoryPair_4800.tif: [testng] [2024-11-02 00:36:30,430] [pool-1-thread-1] Initializing /data/damian/36m.tiff: [testng] [2024-11-02 00:36:33,098] [pool-1-thread-3] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-11-02 00:36:33,840] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-11-02 00:36:34,643] 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00:45:16,720] [pool-1-thread-2] Initializing /data/misc/mri-new.mov: [testng] [2024-11-02 00:45:17,118] [pool-1-thread-4] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-11-02 00:45:17,546] [pool-1-thread-1] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-11-02 00:45:17,810] [pool-1-thread-12] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-11-02 00:45:18,023] [pool-1-thread-5] Initializing /data/julien/baldindq-OVA.TIF: [testng] [2024-11-02 00:45:18,621] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-11-02 00:45:19,073] [pool-1-thread-2] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-11-02 00:45:19,656] [pool-1-thread-3] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-11-02 00:45:20,512] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z057.tif: [testng] [2024-11-02 00:45:20,747] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-11-02 00:45:21,760] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-11-02 00:45:22,022] [pool-1-thread-5] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-11-02 00:45:22,265] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-11-02 00:45:22,422] [pool-1-thread-11] Initializing /data/misc/mri-old.mov: [testng] [2024-11-02 00:45:23,132] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-11-02 00:45:23,846] [pool-1-thread-11] Initializing /data/kevino/_BF_00003.tif: [testng] [2024-11-02 00:45:24,200] [pool-1-thread-3] Initializing /data/public/libtiff/cramps-tile.tif: [testng] [2024-11-02 00:45:24,547] [pool-1-thread-10] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-11-02 00:45:24,935] [pool-1-thread-9] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-11-02 00:45:25,373] [pool-1-thread-6] Initializing 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[testng] [2024-11-02 00:45:30,892] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x16.tiff: [testng] [2024-11-02 00:45:31,412] [pool-1-thread-6] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-11-02 00:45:32,995] [pool-1-thread-10] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-11-02 00:45:33,796] [pool-1-thread-12] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] [2024-11-02 00:45:35,836] [pool-1-thread-8] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-11-02 00:45:36,675] [pool-1-thread-3] Initializing /data/tom-kazimiers/test_exiftool2_resave2.tiff: [testng] [2024-11-02 00:45:37,027] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-11-02 00:45:37,432] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-11-02 00:45:37,817] [pool-1-thread-1] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-11-02 00:45:38,266] [pool-1-thread-12] Initializing /data/jerome/e346_plt1(m)_F1-6.tif: [testng] [2024-11-02 00:45:38,649] [pool-1-thread-2] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-11-02 00:45:39,083] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z061.tif: [testng] [2024-11-02 00:45:41,151] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-11-02 00:45:41,422] [pool-1-thread-5] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-11-02 00:45:41,888] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z032.tif: [testng] [2024-11-02 00:45:42,140] [pool-1-thread-9] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-11-02 00:45:42,504] [pool-1-thread-1] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-11-02 00:45:43,350] [pool-1-thread-2] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-11-02 00:45:44,165] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-01.tiff: [testng] [2024-11-02 00:45:45,074] [pool-1-thread-7] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-11-02 00:45:45,950] [pool-1-thread-8] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-11-02 00:45:46,463] [pool-1-thread-12] Initializing /data/misc/ms-paint.png: [testng] [2024-11-02 00:45:47,727] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z032.tif: [testng] [2024-11-02 00:45:48,090] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-11-02 00:45:48,435] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z024.tif: [testng] [2024-11-02 00:45:48,664] [pool-1-thread-11] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-11-02 00:45:48,936] [pool-1-thread-2] Initializing /data/chris-lesiak/half-float.tiff: [testng] [2024-11-02 00:45:49,237] [pool-1-thread-12] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] [2024-11-02 00:45:50,919] [pool-1-thread-6] Initializing /data/stephane/Copy of listeria + clathrin1_w3Cy5.tif: [testng] [2024-11-02 00:45:51,292] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] [2024-11-02 00:45:51,642] [pool-1-thread-7] Initializing /data/josh/stack.tif: [testng] [2024-11-02 00:45:52,497] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-11-02 00:45:52,850] [pool-1-thread-3] Initializing /data/josiah/cell-Z36.C1.tiff: [testng] [2024-11-02 00:45:53,237] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-11-02 00:45:53,466] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-11-02 00:45:54,077] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-11-02 00:45:54,382] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z045.tif: [testng] [2024-11-02 00:45:54,731] [pool-1-thread-10] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-11-02 00:45:56,312] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z032.tif: [testng] [2024-11-02 00:45:56,686] [pool-1-thread-8] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-11-02 00:45:57,115] [pool-1-thread-9] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-11-02 00:45:57,484] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-11-02 00:45:58,178] [pool-1-thread-7] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-11-02 00:45:58,654] [pool-1-thread-3] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] [2024-11-02 00:45:59,203] [pool-1-thread-1] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-11-02 00:46:04,689] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-11-02 00:46:05,031] [pool-1-thread-4] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-11-02 00:46:07,427] [pool-1-thread-6] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-11-02 00:46:07,790] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-11-02 00:46:08,381] [pool-1-thread-12] Initializing /data/carolyn/tumor_4.tif: [testng] [2024-11-02 00:46:08,767] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-11-02 00:46:08,961] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x32.tiff: [testng] [2024-11-02 00:46:09,114] [pool-1-thread-8] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-11-02 00:46:09,293] [pool-1-thread-7] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-11-02 00:46:09,463] [pool-1-thread-11] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-11-02 00:46:09,665] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-11-02 00:46:09,858] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-11-02 00:46:10,049] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-11-02 00:46:13,323] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-11-02 00:46:13,529] [pool-1-thread-5] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] [2024-11-02 00:46:13,842] [pool-1-thread-2] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-11-02 00:46:14,123] [pool-1-thread-4] Initializing /data/josiah/cell-Z0.C0.tiff: [testng] [2024-11-02 00:46:14,308] [pool-1-thread-9] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-11-02 00:46:14,511] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-11-02 00:46:14,717] [pool-1-thread-3] Initializing /data/public/condensation/E4.pattern6.tif: [testng] [2024-11-02 00:46:14,923] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z026.tif: [testng] [2024-11-02 00:46:15,099] [pool-1-thread-7] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-11-02 00:46:17,916] [pool-1-thread-6] Initializing /data/damian/damian.tif: [testng] [2024-11-02 00:46:18,564] [pool-1-thread-12] Initializing /data/ascb/FND-24_GeorgeEPalade.tif: [testng] [2024-11-02 00:46:18,973] [pool-1-thread-10] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-11-02 00:46:19,330] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0246.TIF: [testng] [2024-11-02 00:46:19,602] [pool-1-thread-4] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-11-02 00:46:19,887] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-11-02 00:46:20,177] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-11-02 00:46:21,417] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] [2024-11-02 00:46:23,442] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-11-02 00:46:23,831] [pool-1-thread-5] Initializing /data/brian/datamanager.tiff: [testng] [2024-11-02 00:46:24,321] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z051.tif: [testng] [2024-11-02 00:46:24,784] [pool-1-thread-4] Initializing /data/qa-4968/twocars2.tif: [testng] [2024-11-02 00:46:25,405] [pool-1-thread-8] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 24 minutes 41 seconds Finished: SUCCESS