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Started by upstream project "BIOFORMATS-test-repo" build number 242 originally caused by: Started by upstream project "Trigger" build number 267 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins8503878044538383976.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_38133_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 03:13:49,386 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:13:49,388 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 03:13:49,388 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:13:49,389 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:13:49,389 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:13:49,389 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:13:49,390 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:13:49,390 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:13:49,390 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:13:49,391 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:13:49,391 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:13:49,392 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:13:49,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:13:49,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:13:49,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:13:49,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:13:49,602 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:13:49,602 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:13:49,602 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:13:49,603 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:13:49,603 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 03:13:49,603 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 03:13:49,604 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 214 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-02 03:13:49,615] [main] java.version = 11.0.16 [testng] 03:13:49,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:13:49,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:13:49,665 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-02_03-13-49.log] [testng] 03:13:49,667 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-11-02 03:13:49,669] [main] testng.directory = /data [testng] [2024-11-02 03:13:49,669] [main] testng.configDirectory = /config [testng] [2024-11-02 03:13:49,680] [main] testng.multiplier = 1.0 [testng] [2024-11-02 03:13:49,682] [main] testng.in-memory = false [testng] [2024-11-02 03:13:49,682] [main] testng.allow-missing = false [testng] [2024-11-02 03:13:49,682] [main] user.language = en [testng] [2024-11-02 03:13:49,682] [main] user.country = ${user.country} [testng] [2024-11-02 03:13:49,682] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-02 03:15:07,275] [main] ---------------------------------------- [testng] [2024-11-02 03:15:07,275] [main] Total files: 15735 [testng] [2024-11-02 03:15:07,275] [main] Scan time: 77.593 s (4 ms/file) [testng] [2024-11-02 03:15:07,275] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-02 03:16:11,597] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 03:16:11,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:16:11,598 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:11,599 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-02_03-16-11.log] [testng] 03:16:11,600 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16107ffe - End of configuration. [testng] [2024-11-02 03:16:11,918] [pool-1-thread-12] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 03:16:11,918 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:16:11,918 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:11,919 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-02_03-16-11.log] [testng] 03:16:11,919 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d6aee4c - End of configuration. [testng] [2024-11-02 03:16:12,203] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 03:16:12,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:16:12,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:12,205 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-02_03-16-12.log] [testng] 03:16:12,205 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52a35507 - End of configuration. [testng] [2024-11-02 03:16:12,523] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 03:16:12,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:16:12,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:12,524 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-02_03-16-12.log] [testng] 03:16:12,525 |-INFO in ch.qos.logback.core.sift.SiftProcessor@271272da - End of configuration. [testng] [2024-11-02 03:16:12,814] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] 03:16:12,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:16:12,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:12,814 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-02_03-16-12.log] [testng] 03:16:12,815 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cdcfe9a - End of configuration. [testng] [2024-11-02 03:16:13,102] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] 03:16:13,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:16:13,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:13,103 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-02_03-16-13.log] [testng] 03:16:13,103 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fe1045c - End of configuration. [testng] [2024-11-02 03:16:13,561] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] 03:16:13,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:16:13,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:13,561 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-02_03-16-13.log] [testng] 03:16:13,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20f03d7b - End of configuration. [testng] [2024-11-02 03:16:13,921] [pool-1-thread-6] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 03:16:13,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:16:13,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:13,922 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-02_03-16-13.log] [testng] 03:16:13,922 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f2af804 - End of configuration. [testng] [2024-11-02 03:16:14,183] [pool-1-thread-5] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 03:16:14,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:16:14,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:14,184 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-02_03-16-14.log] [testng] 03:16:14,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f8106ec - End of configuration. [testng] [2024-11-02 03:16:14,751] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] 03:16:14,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:16:14,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:14,752 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-02_03-16-14.log] [testng] 03:16:14,752 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4005db3c - End of configuration. [testng] [2024-11-02 03:16:15,116] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] 03:16:15,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:16:15,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:15,117 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-02_03-16-15.log] [testng] 03:16:15,117 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39fc2b8f - End of configuration. [testng] [2024-11-02 03:16:15,379] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] 03:16:15,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:16:15,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:15,380 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-02_03-16-15.log] [testng] 03:16:15,380 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54fe2af5 - End of configuration. [testng] [2024-11-02 03:16:26,099] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-11-02 03:16:28,482] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-11-02 03:16:29,167] [pool-1-thread-9] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-11-02 03:16:29,968] [pool-1-thread-6] Initializing /data/converted/michel/d.tif: [testng] [2024-11-02 03:16:30,758] [pool-1-thread-12] Initializing /data/scott/Slide133-08.tif: [testng] [2024-11-02 03:16:31,406] [pool-1-thread-3] Initializing /data/converted/nicolas/image.tif: [testng] [2024-11-02 03:16:43,871] [pool-1-thread-3] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-11-02 03:16:48,276] [pool-1-thread-12] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-11-02 03:16:49,170] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-11-02 03:17:00,781] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-11-02 03:17:02,709] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-11-02 03:17:06,264] [pool-1-thread-12] Initializing /data/converted/sebastien/test.tif: [testng] [2024-11-02 03:18:02,436] [pool-1-thread-10] Initializing /data/scott/Slide133-04.tif: [testng] [2024-11-02 03:18:07,468] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-11-02 03:18:20,902] [pool-1-thread-10] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-11-02 03:18:26,577] [pool-1-thread-10] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-11-02 03:19:33,272] [pool-1-thread-10] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-11-02 03:19:53,145] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-11-02 03:20:05,506] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-11-02 03:20:06,894] [pool-1-thread-1] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-11-02 03:20:08,463] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-11-02 03:20:19,934] [pool-1-thread-8] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-11-02 03:20:23,586] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-11-02 03:20:27,115] [pool-1-thread-7] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-11-02 03:20:40,805] [pool-1-thread-6] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-11-02 03:20:43,411] [pool-1-thread-8] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-11-02 03:20:53,201] [pool-1-thread-6] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-11-02 03:20:59,431] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-11-02 03:21:09,061] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-11-02 03:21:10,967] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif: [testng] [2024-11-02 03:21:12,013] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-11-02 03:21:16,081] [pool-1-thread-2] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-11-02 03:21:26,031] [pool-1-thread-8] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-11-02 03:21:29,338] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-11-02 03:21:30,093] [pool-1-thread-12] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-11-02 03:21:46,746] [pool-1-thread-12] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-11-02 03:21:55,119] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-11-02 03:21:59,070] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-11-02 03:22:14,071] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-11-02 03:22:32,615] [pool-1-thread-7] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-11-02 03:22:45,547] [pool-1-thread-7] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-11-02 03:23:07,922] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-11-02 03:23:20,930] [pool-1-thread-4] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-11-02 03:25:10,426] [pool-1-thread-10] Initializing /data/converted/michel/e.tif: [testng] [2024-11-02 03:26:09,498] [pool-1-thread-1] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-11-02 03:26:11,336] [pool-1-thread-10] Initializing /data/converted/michel/b.tif: [testng] [2024-11-02 03:26:16,518] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-11-02 03:26:46,550] [pool-1-thread-10] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-11-02 03:27:26,347] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-11-02 03:27:51,867] [pool-1-thread-9] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-11-02 03:28:28,646] [pool-1-thread-9] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-11-02 03:28:53,594] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-11-02 03:29:07,622] [pool-1-thread-2] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-11-02 03:29:31,137] [pool-1-thread-12] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-11-02 03:29:59,486] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-11-02 03:30:21,180] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-11-02 03:30:29,813] [pool-1-thread-11] Initializing /data/converted/dietmar/138.tif: [testng] [2024-11-02 03:31:49,153] [pool-1-thread-1] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-11-02 03:32:20,868] [pool-1-thread-1] Initializing /data/scott/Slide133-11.tif: [testng] [2024-11-02 03:32:51,059] [pool-1-thread-1] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-11-02 03:33:11,052] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-11-02 03:33:18,336] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-11-02 03:34:21,611] [pool-1-thread-10] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-11-02 03:35:55,785] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2024-11-02 03:36:14,892] [pool-1-thread-9] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-11-02 03:37:02,808] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-11-02 03:37:15,175] [pool-1-thread-3] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-11-02 03:37:31,503] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-11-02 03:37:38,967] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-11-02 03:37:47,712] [pool-1-thread-7] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-11-02 03:41:27,616] [pool-1-thread-7] Initializing /data/converted/converted/damian.tif: [testng] [2024-11-02 03:41:51,104] [pool-1-thread-7] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-11-02 03:42:35,037] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-11-02 03:43:01,216] [pool-1-thread-1] Initializing /data/converted/converted/2chz.tif: [testng] [2024-11-02 03:43:44,863] [pool-1-thread-5] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-11-02 03:44:09,257] [pool-1-thread-5] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-11-02 03:44:15,430] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-11-02 03:44:41,255] [pool-1-thread-3] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-11-02 03:44:52,580] [pool-1-thread-10] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-11-02 03:45:05,949] [pool-1-thread-3] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-11-02 03:45:13,876] [pool-1-thread-11] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-11-02 03:45:17,494] [pool-1-thread-10] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-11-02 03:45:43,474] [pool-1-thread-3] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-11-02 03:46:04,621] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-11-02 03:46:12,430] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-11-02 03:46:30,430] [pool-1-thread-10] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-11-02 03:47:52,369] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-11-02 03:49:31,881] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-11-02 03:50:20,960] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-11-02 03:51:42,551] [pool-1-thread-7] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-11-02 03:51:45,251] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-11-02 03:52:04,746] [pool-1-thread-6] Initializing /data/converted/michel/c.tif: [testng] [2024-11-02 03:52:42,227] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-11-02 03:53:18,949] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-11-02 03:53:46,384] [pool-1-thread-2] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-11-02 03:54:16,008] [pool-1-thread-11] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-11-02 03:54:31,717] [pool-1-thread-1] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-11-02 03:55:09,286] [pool-1-thread-1] Initializing /data/scott/Slide133-01.tif: [testng] [2024-11-02 03:55:34,591] [pool-1-thread-3] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-11-02 03:55:40,891] [pool-1-thread-1] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-11-02 03:55:46,957] [pool-1-thread-2] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-11-02 03:56:12,372] [pool-1-thread-9] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-11-02 03:56:16,893] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-11-02 03:57:47,428] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-11-02 03:58:10,199] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-11-02 03:58:55,071] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-11-02 03:59:05,449] [pool-1-thread-5] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-11-02 04:00:45,958] [pool-1-thread-6] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-11-02 04:05:13,905] [pool-1-thread-12] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-11-02 04:05:15,371] [pool-1-thread-3] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-11-02 04:05:35,536] [pool-1-thread-3] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-11-02 04:05:40,311] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-11-02 04:05:56,331] [pool-1-thread-1] Initializing /data/converted/stephan/notok2.tif: [testng] 04:43:53,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:43:53,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:43:53,736 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-02_04-43-53.log] [testng] 04:43:53,736 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d0ea3a9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 90 minutes 8 seconds Finished: SUCCESS