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Started by upstream project "BIOFORMATS-test-repo" build number 243 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins1689209685498593393.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_38180_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 14:00:03,621 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 14:00:03,623 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 14:00:03,623 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 14:00:03,624 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 14:00:03,624 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 14:00:03,625 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 14:00:03,625 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 14:00:03,625 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 14:00:03,626 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 14:00:03,626 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 14:00:03,627 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 14:00:03,627 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 14:00:03,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 14:00:03,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 14:00:03,864 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 14:00:03,864 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 14:00:03,871 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 14:00:03,872 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 14:00:03,872 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 14:00:03,872 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 14:00:03,872 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 14:00:03,873 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 14:00:03,873 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 247 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-02 14:00:03,887] [main] java.version = 11.0.16 [testng] 14:00:03,892 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 14:00:03,892 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:00:03,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-02_14-00-03.log] [testng] 14:00:03,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-11-02 14:00:03,953] [main] testng.directory = /data [testng] [2024-11-02 14:00:03,953] [main] testng.configDirectory = /config [testng] [2024-11-02 14:00:03,964] [main] testng.multiplier = 1.0 [testng] [2024-11-02 14:00:03,966] [main] testng.in-memory = false [testng] [2024-11-02 14:00:03,966] [main] testng.allow-missing = false [testng] [2024-11-02 14:00:03,966] [main] user.language = en [testng] [2024-11-02 14:00:03,966] [main] user.country = ${user.country} [testng] [2024-11-02 14:00:03,966] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-02 14:00:52,195] [main] ---------------------------------------- [testng] [2024-11-02 14:00:52,195] [main] Total files: 4426 [testng] [2024-11-02 14:00:52,196] [main] Scan time: 48.229 s (10 ms/file) [testng] [2024-11-02 14:00:52,196] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-02 14:13:18,807] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] 14:13:18,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 14:13:18,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:18,811 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-02_14-13-18.log] [testng] 14:13:18,812 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e1d4906 - End of configuration. [testng] [2024-11-02 14:13:19,313] [pool-1-thread-12] Initializing /data/misc/wtembryo.tiff: [testng] 14:13:19,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 14:13:19,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:19,315 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-02_14-13-19.log] [testng] 14:13:19,315 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e575f3e - End of configuration. [testng] [2024-11-02 14:13:19,838] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] 14:13:19,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 14:13:19,838 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:19,839 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-02_14-13-19.log] [testng] 14:13:19,839 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6548d376 - End of configuration. [testng] [2024-11-02 14:13:20,412] [pool-1-thread-10] Initializing /data/brian/Alx-488-pk.tif: [testng] 14:13:20,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 14:13:20,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:20,414 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-02_14-13-20.log] [testng] 14:13:20,414 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c719dd0 - End of configuration. [testng] [2024-11-02 14:13:21,031] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] 14:13:21,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 14:13:21,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:21,032 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-02_14-13-21.log] [testng] 14:13:21,032 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2802822 - End of configuration. [testng] [2024-11-02 14:13:21,810] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] 14:13:21,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 14:13:21,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:21,811 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-02_14-13-21.log] [testng] 14:13:21,812 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35529b45 - End of configuration. [testng] [2024-11-02 14:13:22,778] [pool-1-thread-7] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] 14:13:22,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 14:13:22,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:22,780 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-02_14-13-22.log] [testng] 14:13:22,781 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c75be47 - End of configuration. [testng] [2024-11-02 14:13:25,093] [pool-1-thread-6] Initializing /data/public/libtiff/oxford.tif: [testng] 14:13:25,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 14:13:25,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:25,095 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-02_14-13-25.log] [testng] 14:13:25,095 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c191a0d - End of configuration. [testng] [2024-11-02 14:13:25,861] [pool-1-thread-5] Initializing /data/brian/Ch1_fld1.tif: [testng] 14:13:25,861 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 14:13:25,861 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:25,862 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-02_14-13-25.log] [testng] 14:13:25,863 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dbeff0 - End of configuration. [testng] [2024-11-02 14:13:26,993] [pool-1-thread-4] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] 14:13:26,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 14:13:26,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:26,994 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-02_14-13-26.log] [testng] 14:13:26,994 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6fb10083 - End of configuration. [testng] [2024-11-02 14:13:27,911] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] 14:13:27,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 14:13:27,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:27,912 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-02_14-13-27.log] [testng] 14:13:27,912 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bbecc24 - End of configuration. [testng] [2024-11-02 14:13:28,694] [pool-1-thread-2] Initializing /data/jae/first image.tif: [testng] 14:13:28,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 14:13:28,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:28,695 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-02_14-13-28.log] [testng] 14:13:28,696 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b4a9348 - End of configuration. [testng] [2024-11-02 14:13:36,083] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-11-02 14:13:37,313] [pool-1-thread-4] Initializing /data/josiah/cell-Z6.C1.tiff: [testng] [2024-11-02 14:13:37,993] [pool-1-thread-6] Initializing /data/josiah/cell-Z20.C0.tiff: [testng] [2024-11-02 14:13:38,632] [pool-1-thread-12] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-11-02 14:13:39,352] [pool-1-thread-10] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-11-02 14:13:39,922] [pool-1-thread-11] Initializing /data/big-images/2kx2k.tif: [testng] [2024-11-02 14:13:40,487] [pool-1-thread-3] Initializing /data/josiah/cell-Z9.C0.tiff: [testng] [2024-11-02 14:13:41,093] [pool-1-thread-9] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-11-02 14:13:41,851] [pool-1-thread-2] Initializing /data/josiah/cell-Z10.C0.tiff: [testng] [2024-11-02 14:13:42,632] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-11-02 14:13:50,200] [pool-1-thread-1] Initializing /data/public/condensation/E4.pattern7.tif: [testng] [2024-11-02 14:13:54,077] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-11-02 14:13:55,179] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] [2024-11-02 14:13:56,243] [pool-1-thread-2] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-11-02 14:13:57,244] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x64.tiff: [testng] [2024-11-02 14:13:58,207] [pool-1-thread-6] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-11-02 14:13:59,422] [pool-1-thread-3] Initializing /data/kevino/_BF_00004.tif: [testng] [2024-11-02 14:14:00,837] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-11-02 14:14:01,756] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-11-02 14:14:02,655] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-11-02 14:14:04,492] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-11-02 14:14:10,169] [pool-1-thread-1] Initializing /data/wayne/mBoeglin_lzw/mm_7.1.2.0.tif: [testng] [2024-11-02 14:14:13,228] [pool-1-thread-4] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-11-02 14:14:14,303] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-11-02 14:14:15,226] [pool-1-thread-8] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-11-02 14:14:16,449] [pool-1-thread-12] Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-11-02 14:14:17,852] [pool-1-thread-10] Initializing /data/tom/TLD - n000000_Stamp.tif: [testng] [2024-11-02 14:14:19,022] [pool-1-thread-2] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-11-02 14:14:20,096] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-11-02 14:14:21,312] [pool-1-thread-9] Initializing /data/public/condensation/B12.pattern2.tif: [testng] [2024-11-02 14:14:22,200] [pool-1-thread-7] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-11-02 14:14:23,302] [pool-1-thread-11] Initializing /data/glen/742015a20x3middle16bit.tif: [testng] [2024-11-02 14:14:24,360] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-11-02 14:14:32,047] [pool-1-thread-1] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-11-02 14:14:35,201] [pool-1-thread-2] Initializing /data/tamjid/Image_843.tif: [testng] [2024-11-02 14:14:36,373] [pool-1-thread-7] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-11-02 14:14:37,798] [pool-1-thread-5] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-11-02 14:14:39,070] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-11-02 14:14:40,259] [pool-1-thread-6] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-11-02 14:14:41,345] [pool-1-thread-9] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-11-02 14:14:42,445] [pool-1-thread-11] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-11-02 14:14:44,961] [pool-1-thread-10] Initializing /data/damian/36m.tiff: [testng] [2024-11-02 14:14:46,543] [pool-1-thread-8] Initializing /data/ascb/CYT-49_FriendSecretoryPair_4800.tif: [testng] [2024-11-02 14:14:47,619] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-11-02 14:14:48,678] [pool-1-thread-12] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-11-02 14:14:54,578] [pool-1-thread-1] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-11-02 14:14:57,939] [pool-1-thread-5] Initializing 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[2024-11-02 14:24:01,984] [pool-1-thread-3] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-11-02 14:24:02,945] [pool-1-thread-5] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-11-02 14:24:03,778] [pool-1-thread-4] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-11-02 14:24:04,586] [pool-1-thread-11] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-11-02 14:24:05,384] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-11-02 14:24:06,180] [pool-1-thread-8] Initializing /data/julien/baldindq-OVA.TIF: [testng] [2024-11-02 14:24:07,004] [pool-1-thread-12] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-11-02 14:24:07,840] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z057.tif: [testng] [2024-11-02 14:24:09,177] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-11-02 14:24:10,272] [pool-1-thread-9] Initializing 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[pool-1-thread-9] Initializing /data/tobias/test002_1.tif: [testng] [2024-11-02 14:24:24,958] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x16.tiff: [testng] [2024-11-02 14:24:27,445] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0216.TIF: [testng] [2024-11-02 14:24:28,540] [pool-1-thread-10] Initializing /data/josiah/cell-Z32.C0.tiff: [testng] [2024-11-02 14:24:30,455] [pool-1-thread-7] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] [2024-11-02 14:24:34,845] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-11-02 14:24:36,039] [pool-1-thread-9] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-11-02 14:24:37,261] [pool-1-thread-6] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-11-02 14:24:42,675] [pool-1-thread-1] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] [2024-11-02 14:24:43,753] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x16.tiff: [testng] [2024-11-02 14:24:44,798] [pool-1-thread-5] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-11-02 14:24:47,668] [pool-1-thread-4] Initializing /data/damian/18m.tiff: [testng] [2024-11-02 14:24:48,573] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-11-02 14:24:50,272] [pool-1-thread-8] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-11-02 14:24:53,617] [pool-1-thread-10] Initializing /data/tom-kazimiers/test_exiftool2_resave2.tiff: [testng] [2024-11-02 14:24:56,220] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-11-02 14:24:57,257] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-11-02 14:24:58,497] [pool-1-thread-2] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-11-02 14:24:59,739] [pool-1-thread-1] Initializing /data/jerome/e346_plt1(m)_F1-6.tif: [testng] [2024-11-02 14:25:00,780] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-11-02 14:25:01,662] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z061.tif: [testng] [2024-11-02 14:25:02,531] [pool-1-thread-3] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-11-02 14:25:04,196] [pool-1-thread-8] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-11-02 14:25:07,188] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z032.tif: [testng] [2024-11-02 14:25:09,149] [pool-1-thread-7] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-11-02 14:25:10,310] [pool-1-thread-9] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-11-02 14:25:12,981] [pool-1-thread-12] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-11-02 14:25:14,050] [pool-1-thread-4] Initializing 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14:25:27,424] [pool-1-thread-4] Initializing /data/stephane/Copy of listeria + clathrin1_w3Cy5.tif: [testng] [2024-11-02 14:25:29,211] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] [2024-11-02 14:25:30,165] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-11-02 14:25:31,183] [pool-1-thread-5] Initializing /data/josh/stack.tif: [testng] [2024-11-02 14:25:32,119] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-11-02 14:25:32,986] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-11-02 14:25:33,916] [pool-1-thread-6] Initializing /data/josiah/cell-Z36.C1.tiff: [testng] [2024-11-02 14:25:34,808] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-11-02 14:25:39,009] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z045.tif: [testng] [2024-11-02 14:25:39,932] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-11-02 14:25:40,993] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z032.tif: [testng] [2024-11-02 14:25:42,050] [pool-1-thread-9] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-11-02 14:25:43,107] [pool-1-thread-6] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-11-02 14:25:44,361] [pool-1-thread-11] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-11-02 14:25:50,429] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-11-02 14:25:51,488] [pool-1-thread-2] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-11-02 14:25:52,557] [pool-1-thread-12] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] [2024-11-02 14:25:53,746] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-11-02 14:25:54,895] [pool-1-thread-3] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-11-02 14:25:58,495] [pool-1-thread-10] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-11-02 14:26:00,460] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-11-02 14:26:01,618] [pool-1-thread-9] Initializing /data/carolyn/tumor_4.tif: [testng] [2024-11-02 14:26:02,850] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-11-02 14:26:03,973] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-11-02 14:26:05,079] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-11-02 14:26:06,069] [pool-1-thread-7] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-11-02 14:26:07,075] [pool-1-thread-5] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-11-02 14:26:08,117] [pool-1-thread-12] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-11-02 14:26:09,053] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x32.tiff: [testng] [2024-11-02 14:26:15,444] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-11-02 14:26:16,481] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-11-02 14:26:18,534] [pool-1-thread-3] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] [2024-11-02 14:26:19,612] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z026.tif: [testng] [2024-11-02 14:26:20,774] [pool-1-thread-5] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-11-02 14:26:22,362] [pool-1-thread-6] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-11-02 14:26:23,615] [pool-1-thread-1] Initializing /data/josiah/cell-Z0.C0.tiff: [testng] [2024-11-02 14:26:24,939] [pool-1-thread-12] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-11-02 14:26:26,293] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-11-02 14:26:28,588] [pool-1-thread-10] Initializing /data/public/condensation/E4.pattern6.tif: [testng] [2024-11-02 14:26:29,947] [pool-1-thread-7] Initializing /data/damian/damian.tif: [testng] [2024-11-02 14:26:34,822] [pool-1-thread-4] Initializing /data/ascb/FND-24_GeorgeEPalade.tif: [testng] [2024-11-02 14:26:38,109] [pool-1-thread-8] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-11-02 14:26:40,419] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-11-02 14:26:41,819] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-11-02 14:26:43,132] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] [2024-11-02 14:26:44,440] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0246.TIF: [testng] [2024-11-02 14:26:45,720] [pool-1-thread-1] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-11-02 14:26:46,957] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-11-02 14:26:48,326] [pool-1-thread-11] Initializing /data/brian/datamanager.tiff: [testng] [2024-11-02 14:26:52,470] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z051.tif: [testng] [2024-11-02 14:26:55,554] [pool-1-thread-8] Initializing /data/qa-4968/twocars2.tif: [testng] [2024-11-02 14:26:56,893] [pool-1-thread-10] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 27 minutes 4 seconds Finished: SUCCESS