Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 243
originally caused by:
 Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins15278364729705347955.sh
+ '[' cri = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_38262_merge_ci -v /uod/idr/repos/curated/cri:/data -v /uod/idr-scratch/merge-ci/curated/cri:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 15:39:21,615 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 15:39:21,617 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
   [testng] 15:39:21,617 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 15:39:21,618 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 15:39:21,619 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 15:39:21,619 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 15:39:21,619 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 15:39:21,619 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 15:39:21,620 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 15:39:21,620 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 15:39:21,621 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 15:39:21,621 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 15:39:21,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 15:39:21,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 15:39:21,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 15:39:21,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 15:39:21,831 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 15:39:21,831 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 15:39:21,831 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 15:39:21,832 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 15:39:21,832 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
   [testng] 15:39:21,833 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
   [testng] 15:39:21,833 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 213 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-02 15:39:21,842] [main] java.version = 11.0.16
   [testng] 15:39:21,846 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 15:39:21,846 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:39:21,891 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-02_15-39-21.log]
   [testng] 15:39:21,892 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
   [testng] [2024-11-02 15:39:21,895] [main] testng.directory = /data
   [testng] [2024-11-02 15:39:21,895] [main] testng.configDirectory = /config
   [testng] [2024-11-02 15:39:21,905] [main] testng.multiplier = 1.0
   [testng] [2024-11-02 15:39:21,906] [main] testng.in-memory = false
   [testng] [2024-11-02 15:39:21,907] [main] testng.allow-missing = false
   [testng] [2024-11-02 15:39:21,907] [main] user.language = en
   [testng] [2024-11-02 15:39:21,907] [main] user.country = ${user.country}
   [testng] [2024-11-02 15:39:21,907] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-11-02 15:39:22,922] [main] ----------------------------------------
   [testng] [2024-11-02 15:39:22,922] [main] Total files: 96
   [testng] [2024-11-02 15:39:22,922] [main] Scan time: 1.015 s (10 ms/file)
   [testng] [2024-11-02 15:39:22,922] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 96 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-02 15:42:33,099] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_700.tif: 
   [testng] 15:42:33,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 15:42:33,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:33,102 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-02_15-42-33.log]
   [testng] 15:42:33,102 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f1de96b - End of configuration.
   [testng] [2024-11-02 15:42:35,239] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_800.tif: 
   [testng] 15:42:35,239 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 15:42:35,239 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:35,240 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-02_15-42-35.log]
   [testng] 15:42:35,241 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32b8e4e9 - End of configuration.
   [testng] [2024-11-02 15:42:37,547] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_670.tif: 
   [testng] 15:42:37,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 15:42:37,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:37,548 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-02_15-42-37.log]
   [testng] 15:42:37,548 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59cdcac8 - End of configuration.
   [testng] [2024-11-02 15:42:39,885] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_930.tif: 
   [testng] 15:42:39,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 15:42:39,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:39,885 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-02_15-42-39.log]
   [testng] 15:42:39,886 |-INFO in ch.qos.logback.core.sift.SiftProcessor@596db2ba - End of configuration.
   [testng] [2024-11-02 15:42:42,535] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_940.tif: 
   [testng] 15:42:42,535 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 15:42:42,535 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:42,535 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-02_15-42-42.log]
   [testng] 15:42:42,536 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3de25fa - End of configuration.
   [testng] [2024-11-02 15:42:45,086] [pool-1-thread-8] Initializing /data/thomas/B3 FITC Metadata.bmp: 
   [testng] 15:42:45,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 15:42:45,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:45,087 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-02_15-42-45.log]
   [testng] 15:42:45,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73ff48e6 - End of configuration.
   [testng] [2024-11-02 15:42:45,282] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_540.tif: 
   [testng] 15:42:45,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 15:42:45,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:45,283 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-02_15-42-45.log]
   [testng] 15:42:45,283 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f2a15db - End of configuration.
   [testng] [2024-11-02 15:42:47,320] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_520.tif: 
   [testng] 15:42:47,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 15:42:47,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:47,321 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-02_15-42-47.log]
   [testng] 15:42:47,322 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23dedc0 - End of configuration.
   [testng] [2024-11-02 15:42:49,470] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_860.tif: 
   [testng] 15:42:49,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 15:42:49,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:49,471 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-02_15-42-49.log]
   [testng] 15:42:49,471 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a27df4 - End of configuration.
   [testng] [2024-11-02 15:42:51,442] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_660.tif: 
   [testng] 15:42:51,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 15:42:51,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:51,443 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-02_15-42-51.log]
   [testng] 15:42:51,443 |-INFO in ch.qos.logback.core.sift.SiftProcessor@217ceeab - End of configuration.
   [testng] [2024-11-02 15:42:53,500] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_560.tif: 
   [testng] 15:42:53,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 15:42:53,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:53,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-02_15-42-53.log]
   [testng] 15:42:53,501 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52cafe60 - End of configuration.
   [testng] [2024-11-02 15:42:55,521] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_940.tif: 
   [testng] 15:42:55,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 15:42:55,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 15:42:55,522 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-02_15-42-55.log]
   [testng] 15:42:55,522 |-INFO in ch.qos.logback.core.sift.SiftProcessor@669da3cf - End of configuration.
   [testng] [2024-11-02 15:43:01,103] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_800.tif: 
   [testng] [2024-11-02 15:43:13,950] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_570.tif: 
   [testng] [2024-11-02 15:43:15,997] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_720.tif: 
   [testng] [2024-11-02 15:43:18,430] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 FITC_620.tif: 
   [testng] [2024-11-02 15:43:20,769] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_780.tif: 
   [testng] [2024-11-02 15:43:23,082] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_740.tif: 
   [testng] [2024-11-02 15:43:25,367] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_720.tif: 
   [testng] [2024-11-02 15:43:27,973] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_530.tif: 
   [testng] [2024-11-02 15:43:30,344] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_510.tif: 
   [testng] [2024-11-02 15:43:32,936] [pool-1-thread-2] Initializing /data/thomas/B3 DAPI.im3: 
   [testng] [2024-11-02 15:43:33,890] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_740.tif: 
   [testng] [2024-11-02 15:43:36,244] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_770.tif: 
   [testng] [2024-11-02 15:43:39,930] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_920.tif: 
   [testng] [2024-11-02 15:43:51,584] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_640.tif: 
   [testng] [2024-11-02 15:43:56,168] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_810.tif: 
   [testng] [2024-11-02 15:43:58,558] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_680.tif: 
   [testng] [2024-11-02 15:44:00,811] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_620.tif: 
   [testng] [2024-11-02 15:44:03,059] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_590.tif: 
   [testng] [2024-11-02 15:44:05,066] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_860.tif: 
   [testng] [2024-11-02 15:44:07,168] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_660.tif: 
   [testng] [2024-11-02 15:44:09,298] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_850.tif: 
   [testng] [2024-11-02 15:44:11,519] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_820.tif: 
   [testng] [2024-11-02 15:44:13,827] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_760.tif: 
   [testng] [2024-11-02 15:44:15,991] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_510.tif: 
   [testng] [2024-11-02 15:44:17,965] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_580.tif: 
   [testng] [2024-11-02 15:44:30,416] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_680.tif: 
   [testng] [2024-11-02 15:44:35,488] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_950.tif: 
   [testng] [2024-11-02 15:44:37,704] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_630.tif: 
   [testng] [2024-11-02 15:44:40,009] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_890.tif: 
   [testng] [2024-11-02 15:44:42,094] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_690.tif: 
   [testng] [2024-11-02 15:44:44,100] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_710.tif: 
   [testng] [2024-11-02 15:44:46,244] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_850.tif: 
   [testng] [2024-11-02 15:44:48,432] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_790.tif: 
   [testng] [2024-11-02 15:44:50,638] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_750.tif: 
   [testng] [2024-11-02 15:44:52,839] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_560.tif: 
   [testng] [2024-11-02 15:44:54,928] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_950.tif: 
   [testng] [2024-11-02 15:44:57,086] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_780.tif: 
   [testng] [2024-11-02 15:45:10,430] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_580.tif: 
   [testng] [2024-11-02 15:45:16,281] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_770.tif: 
   [testng] [2024-11-02 15:45:18,789] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_670.tif: 
   [testng] [2024-11-02 15:45:21,137] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_830.tif: 
   [testng] [2024-11-02 15:45:23,219] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_830.tif: 
   [testng] [2024-11-02 15:45:25,237] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_550.tif: 
   [testng] [2024-11-02 15:45:27,266] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_920.tif: 
   [testng] [2024-11-02 15:45:29,324] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_610.tif: 
   [testng] [2024-11-02 15:45:31,479] [pool-1-thread-9] Initializing /data/thomas/B3 FITC.im3: 
   [testng] [2024-11-02 15:45:32,331] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_750.tif: 
   [testng] [2024-11-02 15:45:34,414] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_640.tif: 
   [testng] [2024-11-02 15:45:36,633] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_530.tif: 
   [testng] [2024-11-02 15:45:49,375] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_650.tif: 
   [testng] [2024-11-02 15:45:52,629] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_730.tif: 
   [testng] [2024-11-02 15:45:56,348] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_710.tif: 
   [testng] [2024-11-02 15:45:58,422] [pool-1-thread-11] Initializing /data/thomas/B3 DAPI Metadata.bmp: 
   [testng] [2024-11-02 15:45:58,562] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_820.tif: 
   [testng] [2024-11-02 15:46:00,579] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_650.tif: 
   [testng] [2024-11-02 15:46:02,629] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_590.tif: 
   [testng] [2024-11-02 15:46:04,782] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 DAPI_550.tif: 
   [testng] [2024-11-02 15:46:06,946] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_900.tif: 
   [testng] [2024-11-02 15:46:08,954] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_890.tif: 
   [testng] [2024-11-02 15:46:11,067] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_520.tif: 
   [testng] [2024-11-02 15:46:13,185] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_870.tif: 
   [testng] [2024-11-02 15:46:18,225] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_870.tif: 
   [testng] [2024-11-02 15:46:27,699] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_500.tif: 
   [testng] [2024-11-02 15:46:30,053] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_600.tif: 
   [testng] [2024-11-02 15:46:34,127] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_840.tif: 
   [testng] [2024-11-02 15:46:36,259] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_760.tif: 
   [testng] [2024-11-02 15:46:38,286] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_910.tif: 
   [testng] [2024-11-02 15:46:40,784] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_930.tif: 
   [testng] [2024-11-02 15:46:42,868] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_810.tif: 
   [testng] [2024-11-02 15:46:44,753] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_730.tif: 
   [testng] [2024-11-02 15:46:46,910] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_700.tif: 
   [testng] [2024-11-02 15:46:48,715] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_600.tif: 
   [testng] [2024-11-02 15:46:50,512] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_610.tif: 
   [testng] [2024-11-02 15:46:54,894] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_570.tif: 
   [testng] [2024-11-02 15:47:01,296] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_540.tif: 
   [testng] [2024-11-02 15:47:03,326] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_690.tif: 
   [testng] [2024-11-02 15:47:07,061] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_880.tif: 
   [testng] [2024-11-02 15:47:09,040] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_840.tif: 
   [testng] [2024-11-02 15:47:11,057] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_880.tif: 
   [testng] [2024-11-02 15:47:12,942] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_630.tif: 
   [testng] [2024-11-02 15:47:14,710] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_910.tif: 
   [testng] [2024-11-02 15:47:16,517] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_500.tif: 
   [testng] [2024-11-02 15:47:18,348] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_790.tif: 
   [testng] [2024-11-02 15:47:20,127] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_900.tif: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 5088, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 8 minutes 13 seconds
Finished: SUCCESS