![[Jenkins]](/jenkins/static/66435410/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 246 originally caused by: Started by upstream project "Trigger" build number 270 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins17153996444624544666.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_38663_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:19:52,201 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:19:52,203 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 00:19:52,203 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:19:52,204 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:19:52,205 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:19:52,205 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:19:52,205 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:19:52,205 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:19:52,206 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:19:52,207 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:19:52,207 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:19:52,207 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:19:52,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:19:52,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:19:52,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:19:52,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:19:52,426 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:19:52,426 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:19:52,426 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:19:52,427 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:19:52,427 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 00:19:52,428 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 00:19:52,428 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 222 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-05 00:19:52,437] [main] java.version = 11.0.16 [testng] 00:19:52,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:19:52,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:19:52,486 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-05_00-19-52.log] [testng] 00:19:52,487 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-11-05 00:19:52,489] [main] testng.directory = /data [testng] [2024-11-05 00:19:52,489] [main] testng.configDirectory = /config [testng] [2024-11-05 00:19:52,500] [main] testng.multiplier = 1.0 [testng] [2024-11-05 00:19:52,501] [main] testng.in-memory = false [testng] [2024-11-05 00:19:52,501] [main] testng.allow-missing = false [testng] [2024-11-05 00:19:52,501] [main] user.language = en [testng] [2024-11-05 00:19:52,501] [main] user.country = ${user.country} [testng] [2024-11-05 00:19:52,501] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-05 00:19:55,280] [main] ---------------------------------------- [testng] [2024-11-05 00:19:55,281] [main] Total files: 103 [testng] [2024-11-05 00:19:55,281] [main] Scan time: 2.779 s (26 ms/file) [testng] [2024-11-05 00:19:55,281] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-05 00:20:19,671] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] 00:20:19,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:20:19,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:19,674 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-05_00-20-19.log] [testng] 00:20:19,674 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31a6e76d - End of configuration. [testng] [2024-11-05 00:20:19,822] [pool-1-thread-12] Initializing /data/jay/smallerfile.dm3: [testng] 00:20:19,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:20:19,823 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:19,842 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-05_00-20-19.log] [testng] 00:20:19,842 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52670bb6 - End of configuration. [testng] [2024-11-05 00:20:19,990] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] 00:20:19,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:20:19,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:19,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-05_00-20-19.log] [testng] 00:20:19,992 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c5bb950 - End of configuration. [testng] [2024-11-05 00:20:20,805] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] 00:20:20,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:20:20,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:20,806 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-05_00-20-20.log] [testng] 00:20:20,807 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f82be93 - End of configuration. [testng] [2024-11-05 00:20:20,924] [pool-1-thread-9] Initializing /data/jay/biosamplefullframe.dm3: [testng] 00:20:20,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:20:20,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:20,924 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-05_00-20-20.log] [testng] 00:20:20,925 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d2a71b0 - End of configuration. [testng] [2024-11-05 00:20:21,050] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] 00:20:21,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:20:21,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:21,050 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-05_00-20-21.log] [testng] 00:20:21,051 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1145df01 - End of configuration. [testng] [2024-11-05 00:20:21,236] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] 00:20:21,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:20:21,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:21,237 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-05_00-20-21.log] [testng] 00:20:21,238 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c31bd20 - End of configuration. [testng] [2024-11-05 00:20:22,178] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] 00:20:22,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:20:22,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:22,179 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-05_00-20-22.log] [testng] 00:20:22,179 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1429c71b - End of configuration. [testng] [2024-11-05 00:20:22,332] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] 00:20:22,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:20:22,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:22,333 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-05_00-20-22.log] [testng] 00:20:22,333 |-INFO in ch.qos.logback.core.sift.SiftProcessor@436c8730 - End of configuration. [testng] [2024-11-05 00:20:22,474] [pool-1-thread-4] Initializing /data/melissa/annotation-test.tif: [testng] 00:20:22,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:20:22,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:22,475 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-05_00-20-22.log] [testng] 00:20:22,475 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4bef57b1 - End of configuration. [testng] [2024-11-05 00:20:23,312] [pool-1-thread-3] Initializing /data/jay/Carbon.34.dm3: [testng] 00:20:23,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:20:23,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:23,313 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-05_00-20-23.log] [testng] 00:20:23,313 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49e61c4b - End of configuration. [testng] [2024-11-05 00:20:23,426] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] 00:20:23,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:20:23,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:23,427 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-05_00-20-23.log] [testng] 00:20:23,427 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d87af9c - End of configuration. [testng] [2024-11-05 00:20:27,919] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-11-05 00:20:28,417] [pool-1-thread-12] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-11-05 00:20:28,994] [pool-1-thread-10] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-11-05 00:20:29,155] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-11-05 00:20:29,931] [pool-1-thread-9] Initializing /data/jay/dnasample.tif: [testng] [2024-11-05 00:20:31,029] [pool-1-thread-4] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-11-05 00:20:31,145] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-11-05 00:20:31,353] [pool-1-thread-3] Initializing /data/jay/DMtest2.dm3: [testng] [2024-11-05 00:20:31,484] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-11-05 00:20:31,748] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-11-05 00:20:33,323] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-11-05 00:20:34,860] [pool-1-thread-8] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-11-05 00:20:35,691] [pool-1-thread-12] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-11-05 00:20:35,909] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-11-05 00:20:36,451] [pool-1-thread-1] Initializing /data/samples/test-tiles.dm3: [testng] [2024-11-05 00:20:36,767] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-11-05 00:20:37,656] [pool-1-thread-4] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-11-05 00:20:38,168] [pool-1-thread-10] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-11-05 00:20:38,455] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-11-05 00:20:39,563] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-11-05 00:20:40,557] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-11-05 00:20:41,237] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-11-05 00:20:41,525] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-11-05 00:20:41,717] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-11-05 00:20:42,275] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-11-05 00:20:42,435] [pool-1-thread-11] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-11-05 00:20:43,400] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-11-05 00:20:43,857] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-11-05 00:20:44,417] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-11-05 00:20:46,673] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-11-05 00:20:48,177] [pool-1-thread-4] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-11-05 00:20:48,318] [pool-1-thread-6] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-11-05 00:20:49,715] [pool-1-thread-5] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-11-05 00:20:50,392] [pool-1-thread-9] Initializing /data/ofra/lowloss.dm3: [testng] [2024-11-05 00:20:50,517] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-11-05 00:20:50,700] [pool-1-thread-3] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-11-05 00:20:51,532] [pool-1-thread-4] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-11-05 00:20:52,790] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-11-05 00:20:53,059] [pool-1-thread-1] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-11-05 00:20:53,540] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-11-05 00:20:55,743] [pool-1-thread-3] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-11-05 00:20:56,640] [pool-1-thread-12] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-11-05 00:20:57,638] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-11-05 00:20:58,550] [pool-1-thread-6] Initializing /data/jay/dnasample1.dm3: [testng] [2024-11-05 00:20:58,769] [pool-1-thread-4] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-11-05 00:20:59,804] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-11-05 00:21:00,066] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-11-05 00:21:00,231] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-11-05 00:21:00,400] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-11-05 00:21:01,232] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-11-05 00:21:02,229] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-11-05 00:21:04,071] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-11-05 00:21:05,251] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-11-05 00:21:05,375] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-11-05 00:21:05,484] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-11-05 00:21:05,745] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-11-05 00:21:06,224] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-11-05 00:21:06,441] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-11-05 00:21:07,920] [pool-1-thread-8] Initializing /data/qa-7642/8.dm4: [testng] [2024-11-05 00:21:08,653] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-11-05 00:21:08,895] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-11-05 00:21:09,070] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-11-05 00:21:10,075] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-11-05 00:21:10,212] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-11-05 00:21:11,560] [pool-1-thread-1] Initializing /data/qa-21761/example.dm4: [testng] [2024-11-05 00:21:12,105] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-11-05 00:21:13,475] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-11-05 00:21:13,837] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-11-05 00:21:14,909] [pool-1-thread-12] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-11-05 00:21:15,353] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-11-05 00:21:15,550] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-11-05 00:21:15,735] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-11-05 00:21:15,918] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-11-05 00:21:17,716] [pool-1-thread-8] Initializing /data/jay/camtest1.dm3: [testng] [2024-11-05 00:21:17,913] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-11-05 00:21:18,599] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-11-05 00:21:19,775] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-11-05 00:21:20,069] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-11-05 00:21:21,023] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-11-05 00:21:21,234] [pool-1-thread-10] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-11-05 00:21:21,541] [pool-1-thread-2] Initializing /data/jay/DMtest.dm3: [testng] [2024-11-05 00:21:22,767] [pool-1-thread-12] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-11-05 00:21:22,949] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-11-05 00:21:23,340] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-11-05 00:21:23,796] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-11-05 00:21:24,823] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 40 seconds Finished: SUCCESS