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Started by upstream project "BIOFORMATS-test-repo" build number 246
originally caused by:
 Started by upstream project "Trigger" build number 270
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins3465789375385321728.sh
+ '[' afi = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_38741_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 01:25:19,472 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:25:19,506 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:25:19,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:25:19,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:25:19,539 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:25:19,540 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:25:19,540 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:25:19,540 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:25:19,540 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@6340e5f0 - End of configuration.
   [testng] 01:25:19,541 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@1c7696c6 - Registering current configuration as safe fallback point
   [testng] 01:25:19,541 |-INFO in ch.qos.logback.classic.util.ContextInitializer@60099951 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 432 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-05 01:25:19,555] [main] java.version = 11.0.16
   [testng] 01:25:19,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:25:19,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:19,630 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-05_01-25-19.log]
   [testng] 01:25:19,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
   [testng] [2024-11-05 01:25:19,635] [main] testng.directory = /data
   [testng] [2024-11-05 01:25:19,636] [main] testng.configDirectory = /config
   [testng] [2024-11-05 01:25:19,684] [main] testng.multiplier = 1.0
   [testng] [2024-11-05 01:25:19,685] [main] testng.in-memory = false
   [testng] [2024-11-05 01:25:19,686] [main] testng.allow-missing = false
   [testng] [2024-11-05 01:25:19,686] [main] user.language = en
   [testng] [2024-11-05 01:25:19,686] [main] user.country = ${user.country}
   [testng] [2024-11-05 01:25:19,686] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-11-05 01:25:22,471] [main] ----------------------------------------
   [testng] [2024-11-05 01:25:22,471] [main] Total files: 16
   [testng] [2024-11-05 01:25:22,471] [main] Scan time: 2.785 s (174 ms/file)
   [testng] [2024-11-05 01:25:22,471] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 15 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-05 01:25:41,334] [pool-1-thread-1] Initializing /data/samples/5358.afi: 
   [testng] 01:25:41,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:25:41,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:41,336 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-05_01-25-41.log]
   [testng] 01:25:41,337 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72e33306 - End of configuration.
   [testng] [2024-11-05 01:25:41,987] [pool-1-thread-12] Initializing /data/samples/5339.afi: 
   [testng] 01:25:41,987 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:25:41,987 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:42,007 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-05_01-25-42.log]
   [testng] 01:25:42,008 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b1a18f - End of configuration.
   [testng] [2024-11-05 01:25:42,693] [pool-1-thread-11] Initializing /data/samples/5407.afi: 
   [testng] 01:25:42,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:25:42,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:42,694 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-05_01-25-42.log]
   [testng] 01:25:42,695 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3864de32 - End of configuration.
   [testng] [2024-11-05 01:25:43,271] [pool-1-thread-10] Initializing /data/samples/5371.afi: 
   [testng] 01:25:43,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:25:43,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:43,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-05_01-25-43.log]
   [testng] 01:25:43,273 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c2e86ab - End of configuration.
   [testng] [2024-11-05 01:25:43,901] [pool-1-thread-9] Initializing /data/samples/5306.afi: 
   [testng] 01:25:43,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:25:43,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:43,902 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-05_01-25-43.log]
   [testng] 01:25:43,903 |-INFO in ch.qos.logback.core.sift.SiftProcessor@104609de - End of configuration.
   [testng] [2024-11-05 01:25:44,536] [pool-1-thread-8] Initializing /data/samples/5387.afi: 
   [testng] 01:25:44,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:25:44,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:44,537 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-05_01-25-44.log]
   [testng] 01:25:44,538 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f6cd913 - End of configuration.
   [testng] [2024-11-05 01:25:45,206] [pool-1-thread-7] Initializing /data/samples/5351.afi: 
   [testng] 01:25:45,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:25:45,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:45,207 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-05_01-25-45.log]
   [testng] 01:25:45,207 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ad29181 - End of configuration.
   [testng] [2024-11-05 01:25:45,866] [pool-1-thread-6] Initializing /data/samples/5383.afi: 
   [testng] 01:25:45,866 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:25:45,866 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:45,867 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-05_01-25-45.log]
   [testng] 01:25:45,867 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1699b7a6 - End of configuration.
   [testng] [2024-11-05 01:25:46,517] [pool-1-thread-5] Initializing /data/samples/5347.afi: 
   [testng] 01:25:46,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:25:46,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:46,518 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-05_01-25-46.log]
   [testng] 01:25:46,519 |-INFO in ch.qos.logback.core.sift.SiftProcessor@704e4f8 - End of configuration.
   [testng] [2024-11-05 01:25:47,143] [pool-1-thread-4] Initializing /data/samples/5400.afi: 
   [testng] 01:25:47,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:25:47,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:47,144 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-05_01-25-47.log]
   [testng] 01:25:47,144 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79170391 - End of configuration.
   [testng] [2024-11-05 01:25:47,743] [pool-1-thread-3] Initializing /data/samples/5446.afi: 
   [testng] 01:25:47,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:25:47,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:47,744 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-05_01-25-47.log]
   [testng] 01:25:47,745 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ccd0076 - End of configuration.
   [testng] [2024-11-05 01:25:48,645] [pool-1-thread-2] Initializing /data/samples/5365.afi: 
   [testng] 01:25:48,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:25:48,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:48,646 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-05_01-25-48.log]
   [testng] 01:25:48,646 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70e51fde - End of configuration.
   [testng] [2024-11-05 01:26:36,440] [pool-1-thread-9] Initializing /data/samples/5414.afi: 
   [testng] [2024-11-05 01:26:37,208] [pool-1-thread-1] Initializing /data/samples/5440.afi: 
   [testng] [2024-11-05 01:26:43,753] [pool-1-thread-3] Initializing /data/samples/5343.afi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 795, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 2 minutes 23 seconds
Finished: SUCCESS