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Started by upstream project "BIOFORMATS-test-repo" build number 246 originally caused by: Started by upstream project "Trigger" build number 270 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins10426726143434832655.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_38789_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 02:46:03,674 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:46:03,677 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 02:46:03,677 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:46:03,678 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:46:03,679 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:46:03,679 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:46:03,679 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:46:03,679 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:46:03,680 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:46:03,681 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:46:03,681 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:46:03,682 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:46:03,884 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:46:03,884 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:46:03,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:46:03,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:46:03,914 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:46:03,914 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:46:03,915 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:46:03,915 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:46:03,915 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 02:46:03,916 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 02:46:03,916 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 236 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-05 02:46:03,929] [main] java.version = 11.0.16 [testng] 02:46:03,934 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:46:03,934 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:46:03,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-05_02-46-03.log] [testng] 02:46:04,002 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-11-05 02:46:04,004] [main] testng.directory = /data [testng] [2024-11-05 02:46:04,004] [main] testng.configDirectory = /config [testng] [2024-11-05 02:46:04,014] [main] testng.multiplier = 1.0 [testng] [2024-11-05 02:46:04,015] [main] testng.in-memory = false [testng] [2024-11-05 02:46:04,016] [main] testng.allow-missing = false [testng] [2024-11-05 02:46:04,016] [main] user.language = en [testng] [2024-11-05 02:46:04,016] [main] user.country = ${user.country} [testng] [2024-11-05 02:46:04,016] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-05 02:47:30,364] [main] ---------------------------------------- [testng] [2024-11-05 02:47:30,364] [main] Total files: 15735 [testng] [2024-11-05 02:47:30,364] [main] Scan time: 86.348 s (5 ms/file) [testng] [2024-11-05 02:47:30,365] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-05 02:49:48,038] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 02:49:48,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:49:48,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:48,041 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-05_02-49-48.log] [testng] 02:49:48,041 |-INFO in ch.qos.logback.core.sift.SiftProcessor@728ed1d4 - End of configuration. [testng] [2024-11-05 02:49:48,941] [pool-1-thread-12] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 02:49:48,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:49:48,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:48,942 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-05_02-49-48.log] [testng] 02:49:48,942 |-INFO in ch.qos.logback.core.sift.SiftProcessor@424f5b19 - End of configuration. [testng] [2024-11-05 02:49:49,647] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 02:49:49,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:49:49,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:49,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-05_02-49-49.log] [testng] 02:49:49,648 |-INFO in ch.qos.logback.core.sift.SiftProcessor@486a504b - End of configuration. [testng] [2024-11-05 02:49:50,321] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 02:49:50,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:49:50,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:50,322 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-05_02-49-50.log] [testng] 02:49:50,322 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12aadae0 - End of configuration. [testng] [2024-11-05 02:49:51,159] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] 02:49:51,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:49:51,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:51,160 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-05_02-49-51.log] [testng] 02:49:51,160 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f993f61 - End of configuration. [testng] [2024-11-05 02:49:52,001] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] 02:49:52,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:49:52,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:52,002 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-05_02-49-52.log] [testng] 02:49:52,002 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7173d488 - End of configuration. [testng] [2024-11-05 02:49:52,989] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] 02:49:52,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:49:52,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:52,990 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-05_02-49-52.log] [testng] 02:49:52,990 |-INFO in ch.qos.logback.core.sift.SiftProcessor@356bd7ce - End of configuration. [testng] [2024-11-05 02:49:53,991] [pool-1-thread-6] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 02:49:53,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:49:53,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:53,992 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-05_02-49-53.log] [testng] 02:49:53,992 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49411755 - End of configuration. [testng] [2024-11-05 02:49:54,720] [pool-1-thread-5] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 02:49:54,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:49:54,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:54,721 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-05_02-49-54.log] [testng] 02:49:54,722 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e8adef1 - End of configuration. [testng] [2024-11-05 02:49:55,691] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] 02:49:55,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:49:55,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:55,692 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-05_02-49-55.log] [testng] 02:49:55,693 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a0cd58 - End of configuration. [testng] [2024-11-05 02:49:56,614] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] 02:49:56,614 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:49:56,614 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:56,615 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-05_02-49-56.log] [testng] 02:49:56,615 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41b5f3de - End of configuration. [testng] [2024-11-05 02:49:57,686] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] 02:49:57,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:49:57,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:57,687 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-05_02-49-57.log] [testng] 02:49:57,688 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26ec8396 - End of configuration. [testng] [2024-11-05 02:50:15,432] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-11-05 02:50:19,127] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-11-05 02:50:20,539] [pool-1-thread-9] Initializing /data/converted/michel/d.tif: [testng] [2024-11-05 02:50:21,724] [pool-1-thread-3] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-11-05 02:50:24,043] [pool-1-thread-6] Initializing /data/scott/Slide133-08.tif: [testng] [2024-11-05 02:50:25,148] [pool-1-thread-12] Initializing /data/converted/nicolas/image.tif: [testng] [2024-11-05 02:50:41,703] [pool-1-thread-12] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-11-05 02:50:43,940] [pool-1-thread-9] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-11-05 02:50:45,002] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-11-05 02:51:00,441] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-11-05 02:51:01,559] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-11-05 02:51:05,311] [pool-1-thread-9] Initializing /data/converted/sebastien/test.tif: [testng] [2024-11-05 02:52:14,807] [pool-1-thread-10] Initializing /data/scott/Slide133-04.tif: [testng] [2024-11-05 02:52:19,671] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-11-05 02:52:34,113] [pool-1-thread-10] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-11-05 02:52:41,218] [pool-1-thread-10] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-11-05 02:54:04,141] [pool-1-thread-10] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-11-05 02:54:24,432] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-11-05 02:54:41,928] [pool-1-thread-7] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-11-05 02:54:45,085] [pool-1-thread-1] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-11-05 02:54:47,173] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-11-05 02:54:51,646] [pool-1-thread-10] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-11-05 02:54:59,044] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-11-05 02:55:05,575] [pool-1-thread-1] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-11-05 02:55:25,822] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-11-05 02:55:29,421] [pool-1-thread-6] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-11-05 02:55:43,392] [pool-1-thread-10] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-11-05 02:55:54,668] [pool-1-thread-3] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-11-05 02:56:05,736] [pool-1-thread-6] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-11-05 02:56:13,040] [pool-1-thread-3] Initializing /data/othmar/mozaic.tif: [testng] [2024-11-05 02:56:15,675] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-11-05 02:56:19,821] [pool-1-thread-2] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-11-05 02:56:32,822] [pool-1-thread-6] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-11-05 02:56:37,854] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-11-05 02:56:40,398] [pool-1-thread-2] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-11-05 02:57:07,613] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-11-05 02:57:15,130] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-11-05 02:57:31,496] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-11-05 02:57:43,775] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-11-05 02:58:01,960] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-11-05 02:58:18,305] [pool-1-thread-1] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-11-05 02:58:50,531] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-11-05 02:58:59,819] [pool-1-thread-3] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-11-05 03:00:09,309] [pool-1-thread-8] Initializing /data/converted/michel/e.tif: [testng] [2024-11-05 03:00:42,882] [pool-1-thread-7] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-11-05 03:00:45,208] [pool-1-thread-1] Initializing /data/converted/michel/b.tif: [testng] [2024-11-05 03:00:49,746] [pool-1-thread-8] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-11-05 03:01:12,021] [pool-1-thread-1] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-11-05 03:01:44,363] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-11-05 03:02:37,680] [pool-1-thread-4] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-11-05 03:03:25,660] [pool-1-thread-4] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-11-05 03:03:55,482] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-11-05 03:03:58,373] [pool-1-thread-4] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-11-05 03:04:37,406] [pool-1-thread-2] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-11-05 03:05:34,293] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-11-05 03:05:44,554] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-11-05 03:05:57,731] [pool-1-thread-11] Initializing /data/converted/dietmar/138.tif: [testng] [2024-11-05 03:07:15,868] [pool-1-thread-7] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-11-05 03:07:48,032] [pool-1-thread-7] Initializing /data/scott/Slide133-11.tif: [testng] [2024-11-05 03:08:15,766] [pool-1-thread-7] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-11-05 03:08:35,627] [pool-1-thread-2] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-11-05 03:08:43,830] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-11-05 03:09:46,983] [pool-1-thread-1] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-11-05 03:11:28,705] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2024-11-05 03:11:47,501] [pool-1-thread-9] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-11-05 03:12:28,075] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-11-05 03:12:45,539] [pool-1-thread-12] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-11-05 03:12:46,969] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-11-05 03:13:00,450] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-11-05 03:13:06,357] [pool-1-thread-12] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-11-05 03:16:24,742] [pool-1-thread-12] Initializing /data/converted/converted/damian.tif: [testng] [2024-11-05 03:16:51,024] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-11-05 03:17:36,713] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-11-05 03:17:57,331] [pool-1-thread-7] Initializing /data/converted/converted/2chz.tif: [testng] [2024-11-05 03:18:45,581] [pool-1-thread-5] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-11-05 03:19:06,462] [pool-1-thread-10] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-11-05 03:19:08,334] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-11-05 03:19:42,322] [pool-1-thread-8] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-11-05 03:19:43,961] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-11-05 03:20:06,519] [pool-1-thread-11] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-11-05 03:20:08,190] [pool-1-thread-8] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-11-05 03:20:09,865] [pool-1-thread-1] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-11-05 03:20:40,674] [pool-1-thread-11] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-11-05 03:20:51,284] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-11-05 03:20:54,813] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-11-05 03:21:13,873] [pool-1-thread-1] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-11-05 03:22:35,215] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-11-05 03:23:55,391] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-11-05 03:24:34,102] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-11-05 03:25:41,123] [pool-1-thread-12] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-11-05 03:25:51,692] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-11-05 03:25:57,038] [pool-1-thread-5] Initializing /data/converted/michel/c.tif: [testng] [2024-11-05 03:26:30,378] [pool-1-thread-5] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-11-05 03:27:08,464] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-11-05 03:27:31,329] [pool-1-thread-4] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-11-05 03:28:00,767] [pool-1-thread-7] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-11-05 03:28:13,669] [pool-1-thread-8] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-11-05 03:28:49,140] [pool-1-thread-8] Initializing /data/scott/Slide133-01.tif: [testng] [2024-11-05 03:29:16,723] [pool-1-thread-8] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-11-05 03:29:22,662] [pool-1-thread-4] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-11-05 03:29:26,516] [pool-1-thread-11] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-11-05 03:29:51,621] [pool-1-thread-4] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-11-05 03:30:00,286] [pool-1-thread-9] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-11-05 03:31:25,707] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-11-05 03:31:44,616] [pool-1-thread-11] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-11-05 03:32:32,820] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-11-05 03:32:45,552] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-11-05 03:34:34,361] [pool-1-thread-5] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-11-05 03:39:24,862] [pool-1-thread-8] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-11-05 03:39:28,953] [pool-1-thread-2] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-11-05 03:39:50,868] [pool-1-thread-2] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-11-05 03:39:52,675] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-11-05 03:40:17,308] [pool-1-thread-9] Initializing /data/converted/stephan/notok2.tif: [testng] 04:15:47,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:15:47,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:15:47,043 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-05_04-15-47.log] [testng] 04:15:47,044 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d0ea3a9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 89 minutes 47 seconds Finished: SUCCESS