![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 248 originally caused by: Started by upstream project "Trigger" build number 272 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins8916404363162775438.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_39030_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:50:14,788 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:50:14,790 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 00:50:14,790 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:50:14,791 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:50:14,791 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:50:14,792 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:50:14,792 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:50:14,792 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:50:14,792 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:50:14,793 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:50:14,794 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:50:14,794 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:50:14,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:50:14,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:50:14,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:50:14,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:50:14,997 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:50:14,997 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:50:14,997 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:50:14,998 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:50:14,998 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 00:50:14,999 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 00:50:14,999 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 207 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-07 00:50:15,008] [main] java.version = 21 [testng] 00:50:15,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:50:15,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:50:15,055 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-07_00-50-15.log] [testng] 00:50:15,057 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-11-07 00:50:15,058] [main] testng.directory = /data [testng] [2024-11-07 00:50:15,058] [main] testng.configDirectory = /config [testng] [2024-11-07 00:50:15,067] [main] testng.multiplier = 1.0 [testng] [2024-11-07 00:50:15,067] [main] testng.in-memory = false [testng] [2024-11-07 00:50:15,067] [main] testng.allow-missing = false [testng] [2024-11-07 00:50:15,068] [main] user.language = en [testng] [2024-11-07 00:50:15,068] [main] user.country = ${user.country} [testng] [2024-11-07 00:50:15,068] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-07 00:50:41,377] [main] ---------------------------------------- [testng] [2024-11-07 00:50:41,377] [main] Total files: 259 [testng] [2024-11-07 00:50:41,377] [main] Scan time: 26.309 s (101 ms/file) [testng] [2024-11-07 00:50:41,377] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-07 00:58:41,101] [pool-1-thread-1] Initializing /data/molly/11OCT2.OIF: [testng] 00:58:41,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:58:41,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:58:41,103 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-07_00-58-41.log] [testng] 00:58:41,104 |-INFO in ch.qos.logback.core.sift.SiftProcessor@359b839f - End of configuration. [testng] [2024-11-07 00:58:48,181] [pool-1-thread-12] Initializing /data/kay/IM2pg.oib: [testng] 00:58:48,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:58:48,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:58:48,182 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-07_00-58-48.log] [testng] 00:58:48,183 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9c27da4 - End of configuration. [testng] [2024-11-07 00:58:48,522] [pool-1-thread-11] Initializing /data/johannes/step2.bmp: [testng] 00:58:48,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:58:48,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:58:48,523 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-07_00-58-48.log] [testng] 00:58:48,524 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dc24ef9 - End of configuration. [testng] [2024-11-07 00:58:48,561] [pool-1-thread-10] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] 00:58:48,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:58:48,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:58:48,562 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-07_00-58-48.log] [testng] 00:58:48,563 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d654a70 - End of configuration. [testng] [2024-11-07 00:58:48,883] [pool-1-thread-9] Initializing /data/chris/missegragation-15.oib: [testng] 00:58:48,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:58:48,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:58:48,884 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-07_00-58-48.log] [testng] 00:58:48,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64facc0f - End of configuration. [testng] [2024-11-07 00:58:49,097] [pool-1-thread-8] Initializing /data/aryeh/1h_after_pdt.oib: [testng] 00:58:49,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:58:49,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:58:49,098 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-07_00-58-49.log] [testng] 00:58:49,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20360706 - End of configuration. [testng] [2024-11-07 00:58:51,433] [pool-1-thread-7] Initializing /data/allan/new_30min3_1z2.oib: [testng] 00:58:51,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:58:51,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:58:51,434 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-07_00-58-51.log] [testng] 00:58:51,434 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b507987 - End of configuration. [testng] [2024-11-07 00:58:51,668] [pool-1-thread-6] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] 00:58:51,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:58:51,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:58:51,669 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-07_00-58-51.log] [testng] 00:58:51,669 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7bf40750 - End of configuration. [testng] [2024-11-07 00:58:51,870] [pool-1-thread-5] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 00:58:51,870 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:58:51,870 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:58:51,871 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-07_00-58-51.log] [testng] 00:58:51,871 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30eed605 - End of configuration. [testng] [2024-11-07 00:58:52,158] [pool-1-thread-4] Initializing /data/stefan/cytosol_01a.oif: [testng] 00:58:52,158 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:58:52,158 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:58:52,158 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-07_00-58-52.log] [testng] 00:58:52,159 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2103e842 - End of configuration. [testng] [2024-11-07 00:59:03,934] [pool-1-thread-3] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 00:59:03,934 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:59:03,934 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:03,935 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-07_00-59-03.log] [testng] 00:59:03,935 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1433bc89 - End of configuration. [testng] [2024-11-07 00:59:04,097] [pool-1-thread-2] Initializing /data/glen/LUT issue/60x11.oif: [testng] 00:59:04,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:59:04,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:04,098 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-07_00-59-04.log] [testng] 00:59:04,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c7f86e4 - End of configuration. [testng] [2024-11-07 00:59:07,347] [pool-1-thread-11] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-11-07 00:59:11,331] [pool-1-thread-9] Initializing /data/aryeh/1h.oib: [testng] [2024-11-07 00:59:12,447] [pool-1-thread-7] Initializing /data/david/Image0016.oib: [testng] [2024-11-07 00:59:12,745] [pool-1-thread-6] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-11-07 00:59:13,082] [pool-1-thread-10] Initializing /data/johannes/step4b.bmp: [testng] [2024-11-07 00:59:13,454] [pool-1-thread-12] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-11-07 00:59:14,739] [pool-1-thread-10] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-11-07 00:59:15,842] [pool-1-thread-7] Initializing /data/tom/RGB-1.avi: [testng] [2024-11-07 00:59:15,996] [pool-1-thread-6] Initializing /data/aryeh/control_test.oib: [testng] [2024-11-07 00:59:19,218] [pool-1-thread-12] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-11-07 00:59:19,842] [pool-1-thread-9] Initializing /data/johannes/step4.bmp: [testng] [2024-11-07 00:59:20,509] [pool-1-thread-10] Initializing /data/glen/singlesimul.oif: [testng] [2024-11-07 00:59:21,467] [pool-1-thread-7] Initializing /data/johannes/step3.bmp: [testng] [2024-11-07 00:59:21,520] [pool-1-thread-3] Initializing /data/glen/Image0002.oif: [testng] [2024-11-07 00:59:23,379] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-11-07 00:59:24,598] [pool-1-thread-7] Initializing /data/glen/seqlinestack.oib: [testng] [2024-11-07 00:59:25,101] [pool-1-thread-12] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-11-07 00:59:25,837] [pool-1-thread-5] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-11-07 00:59:27,281] [pool-1-thread-9] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-11-07 00:59:28,424] [pool-1-thread-5] Initializing /data/johannes/step1.bmp: [testng] [2024-11-07 00:59:28,672] [pool-1-thread-8] Initializing /data/glen/singleseqframe.oib: [testng] [2024-11-07 00:59:29,444] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-11-07 00:59:30,716] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-11-07 00:59:31,360] [pool-1-thread-5] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-11-07 00:59:32,716] [pool-1-thread-8] Initializing /data/glen/singleseqline.oib: [testng] [2024-11-07 00:59:34,639] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-11-07 00:59:35,168] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-11-07 00:59:35,577] [pool-1-thread-9] Initializing /data/yoshihito/XY.oib: [testng] [2024-11-07 00:59:35,976] [pool-1-thread-8] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-11-07 00:59:38,532] [pool-1-thread-9] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-11-07 00:59:39,284] [pool-1-thread-6] Initializing /data/michael/CELL3.oib: [testng] [2024-11-07 00:59:39,667] [pool-1-thread-7] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-11-07 00:59:40,563] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-11-07 00:59:41,605] [pool-1-thread-11] Initializing /data/simon/never_worked.oib: [testng] [2024-11-07 00:59:43,114] [pool-1-thread-9] Initializing /data/johannes/step5b.bmp: [testng] [2024-11-07 00:59:43,619] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-11-07 00:59:44,704] [pool-1-thread-7] Initializing /data/glen/singleseqframe.oif: [testng] [2024-11-07 00:59:46,693] [pool-1-thread-9] Initializing /data/molly/11OCT5.OIF: [testng] [2024-11-07 01:00:04,899] [pool-1-thread-10] Initializing /data/brian/lambda02nm.oib: [testng] [2024-11-07 01:00:06,770] [pool-1-thread-11] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-11-07 01:00:07,273] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-11-07 01:00:10,525] [pool-1-thread-6] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-11-07 01:00:12,039] [pool-1-thread-11] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-11-07 01:00:15,885] [pool-1-thread-5] Initializing /data/marc/V0606L.oib: [testng] [2024-11-07 01:00:17,556] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-11-07 01:00:22,798] [pool-1-thread-6] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-11-07 01:00:23,412] [pool-1-thread-11] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-11-07 01:00:24,673] [pool-1-thread-10] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-11-07 01:00:26,603] [pool-1-thread-10] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-11-07 01:00:29,040] [pool-1-thread-6] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-11-07 01:00:29,637] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-11-07 01:00:34,019] [pool-1-thread-10] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-11-07 01:00:44,702] [pool-1-thread-5] Initializing /data/molly/11OCT6.OIF: [testng] [2024-11-07 01:01:02,249] [pool-1-thread-6] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-11-07 01:01:03,878] [pool-1-thread-11] Initializing /data/david/Image0016.oif: [testng] [2024-11-07 01:01:07,908] [pool-1-thread-7] Initializing /data/glen/notsaturated.oif: [testng] [2024-11-07 01:01:11,172] [pool-1-thread-8] Initializing /data/marc/V0606J.oib: [testng] [2024-11-07 01:01:14,280] [pool-1-thread-6] Initializing /data/molly/11OCT7.OIF: [testng] [2024-11-07 01:01:57,018] [pool-1-thread-8] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-11-07 01:02:03,158] [pool-1-thread-8] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-11-07 01:02:49,780] [pool-1-thread-11] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-11-07 01:02:51,588] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-11-07 01:02:58,505] [pool-1-thread-12] Initializing /data/sten/01.oib: [testng] [2024-11-07 01:03:03,644] [pool-1-thread-11] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-11-07 01:03:05,381] [pool-1-thread-12] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-11-07 01:03:11,308] [pool-1-thread-11] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-11-07 01:03:15,506] [pool-1-thread-12] Initializing /data/brian/Kaede15.oib: [testng] [2024-11-07 01:03:23,409] [pool-1-thread-12] Initializing /data/molly/11OCT8.OIF: [testng] [2024-11-07 01:12:38,933] [pool-1-thread-7] Initializing /data/jae/Image0001.oib: [testng] [2024-11-07 01:12:45,470] [pool-1-thread-7] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-11-07 01:12:52,615] [pool-1-thread-7] Initializing /data/glen/4205basal106072.oif: [testng] [2024-11-07 01:15:54,275] [pool-1-thread-2] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-11-07 01:16:01,360] [pool-1-thread-2] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-11-07 01:16:06,231] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-11-07 01:16:12,009] [pool-1-thread-2] Initializing /data/simon/used_to_work.oib: [testng] [2024-11-07 01:16:18,229] [pool-1-thread-2] Initializing /data/glen/Null file/test change.oif: [testng] [2024-11-07 01:16:52,102] [pool-1-thread-2] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-11-07 01:16:58,146] [pool-1-thread-2] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-11-07 01:17:02,357] [pool-1-thread-2] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-11-07 01:17:05,085] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-11-07 01:17:08,908] [pool-1-thread-2] Initializing /data/christian/20min.oif: [testng] [2024-11-07 01:17:11,748] [pool-1-thread-11] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-11-07 01:17:18,289] [pool-1-thread-11] Initializing /data/glen/111407.oif: [testng] [2024-11-07 01:17:32,876] [pool-1-thread-2] Initializing /data/glen/simulstack.oif: [testng] [2024-11-07 01:19:37,688] [pool-1-thread-3] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-11-07 01:19:46,166] [pool-1-thread-3] Initializing /data/yasunori/series_1.oib: [testng] [2024-11-07 01:19:54,314] [pool-1-thread-3] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-11-07 01:24:42,638] [pool-1-thread-3] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-11-07 01:26:23,386] [pool-1-thread-9] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-11-07 01:27:20,030] [pool-1-thread-6] Initializing /data/glen/singleseqline.oif: [testng] [2024-11-07 01:27:34,590] [pool-1-thread-9] Initializing /data/glen/simulstack.oib: [testng] [2024-11-07 01:27:44,398] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-11-07 01:27:54,869] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] [2024-11-07 01:28:04,580] [pool-1-thread-9] Initializing /data/tom/zseries-test.oib: [testng] [2024-11-07 01:28:16,782] [pool-1-thread-9] Initializing /data/allan/62909#1.oib: [testng] [2024-11-07 01:28:25,679] [pool-1-thread-9] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-11-07 01:28:50,511] [pool-1-thread-6] Initializing /data/molly/11OCT10.OIF: [testng] [2024-11-07 01:31:06,631] [pool-1-thread-3] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-11-07 01:33:25,378] [pool-1-thread-5] Initializing /data/brian/FLIP.oib: [testng] [2024-11-07 01:33:34,555] [pool-1-thread-5] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-11-07 01:34:12,579] [pool-1-thread-12] Initializing /data/molly/11OCT11.OIF: [testng] [2024-11-07 01:40:16,612] [pool-1-thread-11] Initializing /data/yoshihito/XY.oif: [testng] [2024-11-07 01:40:46,080] [pool-1-thread-2] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-11-07 01:40:52,393] [pool-1-thread-11] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-11-07 01:40:53,919] [pool-1-thread-2] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-11-07 01:41:00,820] [pool-1-thread-2] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-11-07 01:41:03,187] [pool-1-thread-11] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-11-07 01:41:26,043] [pool-1-thread-10] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-11-07 01:41:32,947] [pool-1-thread-10] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-11-07 01:41:39,578] [pool-1-thread-10] Initializing /data/karl/Image0009.oib: [testng] [2024-11-07 01:41:45,448] [pool-1-thread-10] Initializing /data/molly/11OCT4.OIF: [testng] [2024-11-07 01:42:04,824] [pool-1-thread-2] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-11-07 01:42:11,464] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-11-07 01:42:19,790] [pool-1-thread-2] Initializing /data/molly/11OCT9.OIF: [testng] [2024-11-07 01:44:40,217] [pool-1-thread-11] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-11-07 01:44:47,211] [pool-1-thread-11] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-11-07 01:44:53,635] [pool-1-thread-11] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-11-07 01:45:02,780] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-11-07 01:45:15,817] [pool-1-thread-5] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-11-07 01:45:22,949] [pool-1-thread-5] Initializing /data/molly/11OCT3.OIF: [testng] [2024-11-07 01:47:04,742] [pool-1-thread-7] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-11-07 01:47:06,741] [pool-1-thread-7] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-11-07 01:49:09,662] [pool-1-thread-1] Initializing /data/monica/Image0056.oif: [testng] [2024-11-07 01:50:04,929] [pool-1-thread-1] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-11-07 01:50:11,335] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-11-07 01:50:16,717] [pool-1-thread-1] Initializing /data/glen/seqlinestack.oif: [testng] [2024-11-07 01:51:30,817] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-11-07 01:51:42,197] [pool-1-thread-7] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-11-07 01:51:47,836] [pool-1-thread-7] Initializing /data/glen/notsaturated.oib: [testng] [2024-11-07 01:51:55,345] [pool-1-thread-7] Initializing /data/glen/singlesimul.oib: [testng] [2024-11-07 01:52:01,874] [pool-1-thread-7] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-11-07 01:52:52,042] [pool-1-thread-7] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 02:20:14,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:20:14,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:14,117 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-07_02-20-14.log] [testng] 02:20:14,117 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41305e72 - End of configuration. [testng] 02:49:49,755 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:49:49,755 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:49:49,756 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-07_02-49-49.log] [testng] 02:49:49,756 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10f67445 - End of configuration. [testng] 03:09:04,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:09:04,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:09:04,044 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-07_03-09-04.log] [testng] 03:09:04,045 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29e71fad - End of configuration. [testng] 03:17:10,583 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:17:10,583 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:17:10,583 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-07_03-17-10.log] [testng] 03:17:10,584 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a0d555f - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 146 minutes 59 seconds Finished: SUCCESS