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Started by upstream project "BIOFORMATS-test-repo" build number 251
originally caused by:
 Started by upstream project "Trigger" build number 275
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins5144585288799136783.sh
+ '[' fluoview = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_39579_merge_ci -v /uod/idr/repos/curated/fluoview:/data -v /uod/idr-scratch/merge-ci/curated/fluoview:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 03:49:02,813 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 03:49:02,815 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
   [testng] 03:49:02,815 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:49:02,816 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:49:02,817 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 03:49:02,817 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 03:49:02,818 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 03:49:02,818 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:49:02,818 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:49:02,819 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 03:49:02,819 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 03:49:02,820 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 03:49:02,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 03:49:02,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 03:49:03,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 03:49:03,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 03:49:03,016 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 03:49:03,017 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 03:49:03,017 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 03:49:03,017 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 03:49:03,017 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
   [testng] 03:49:03,018 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
   [testng] 03:49:03,018 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 200 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-10 03:49:03,026] [main] java.version = 17.0.2
   [testng] 03:49:03,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 03:49:03,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:03,067 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-10_03-49-03.log]
   [testng] 03:49:03,069 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
   [testng] [2024-11-10 03:49:03,070] [main] testng.directory = /data
   [testng] [2024-11-10 03:49:03,071] [main] testng.configDirectory = /config
   [testng] [2024-11-10 03:49:03,079] [main] testng.multiplier = 1.0
   [testng] [2024-11-10 03:49:03,079] [main] testng.in-memory = false
   [testng] [2024-11-10 03:49:03,079] [main] testng.allow-missing = false
   [testng] [2024-11-10 03:49:03,079] [main] user.language = en
   [testng] [2024-11-10 03:49:03,080] [main] user.country = ${user.country}
   [testng] [2024-11-10 03:49:03,080] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-11-10 03:49:05,166] [main] ----------------------------------------
   [testng] [2024-11-10 03:49:05,166] [main] Total files: 14
   [testng] [2024-11-10 03:49:05,166] [main] Scan time: 2.086 s (149 ms/file)
   [testng] [2024-11-10 03:49:05,166] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-10 03:49:20,008] [pool-1-thread-1] Initializing /data/jae/BrdU.1c-1.z.Live1-25-2005_11-58-40_AM.tif: 
   [testng] 03:49:20,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 03:49:20,009 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:20,010 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-10_03-49-20.log]
   [testng] 03:49:20,010 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f6858c3 - End of configuration.
   [testng] [2024-11-10 03:49:20,721] [pool-1-thread-12] Initializing /data/shalin/40xNA0.6-512x512.tif: 
   [testng] 03:49:20,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 03:49:20,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:20,722 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-10_03-49-20.log]
   [testng] 03:49:20,722 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bba1926 - End of configuration.
   [testng] [2024-11-10 03:49:21,451] [pool-1-thread-11] Initializing /data/timg/LiveOne.tif: 
   [testng] 03:49:21,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 03:49:21,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:21,452 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-10_03-49-21.log]
   [testng] 03:49:21,453 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68a111ae - End of configuration.
   [testng] [2024-11-10 03:49:22,150] [pool-1-thread-10] Initializing /data/timg/eric-three.tif: 
   [testng] 03:49:22,150 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 03:49:22,150 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:22,151 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-10_03-49-22.log]
   [testng] 03:49:22,151 |-INFO in ch.qos.logback.core.sift.SiftProcessor@437ddcf1 - End of configuration.
   [testng] [2024-11-10 03:49:23,338] [pool-1-thread-9] Initializing /data/aaron/olympus_fv500.tif: 
   [testng] 03:49:23,338 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 03:49:23,338 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:23,339 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-10_03-49-23.log]
   [testng] 03:49:23,339 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58c90166 - End of configuration.
   [testng] [2024-11-10 03:49:24,095] [pool-1-thread-8] Initializing /data/timg/eric-one.tif: 
   [testng] 03:49:24,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 03:49:24,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:24,096 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-10_03-49-24.log]
   [testng] 03:49:24,096 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e331968 - End of configuration.
   [testng] [2024-11-10 03:49:24,826] [pool-1-thread-7] Initializing /data/timg/eric-three-projection.tif: 
   [testng] 03:49:24,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 03:49:24,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:24,827 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-10_03-49-24.log]
   [testng] 03:49:24,827 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33a39e - End of configuration.
   [testng] [2024-11-10 03:49:25,469] [pool-1-thread-6] Initializing /data/brian/DBTRG 2X 1a-1_DSP.TIF: 
   [testng] 03:49:25,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 03:49:25,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:25,470 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-10_03-49-25.log]
   [testng] 03:49:25,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38421833 - End of configuration.
   [testng] [2024-11-10 03:49:26,486] [pool-1-thread-5] Initializing /data/timg/eric-one-3d.tif: 
   [testng] 03:49:26,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 03:49:26,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:26,487 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-10_03-49-26.log]
   [testng] 03:49:26,487 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e3e2091 - End of configuration.
   [testng] [2024-11-10 03:49:27,196] [pool-1-thread-4] Initializing /data/timg/LiveTwo.tif: 
   [testng] 03:49:27,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 03:49:27,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:27,197 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-10_03-49-27.log]
   [testng] 03:49:27,197 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bff7d00 - End of configuration.
   [testng] [2024-11-10 03:49:27,873] [pool-1-thread-3] Initializing /data/timg/LiveThree-xyzt.tif: 
   [testng] 03:49:27,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 03:49:27,874 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:27,874 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-10_03-49-27.log]
   [testng] 03:49:27,875 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10afdf7 - End of configuration.
   [testng] [2024-11-10 03:49:28,604] [pool-1-thread-2] Initializing /data/timg/E1-v2(11 som).tif: 
   [testng] 03:49:28,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 03:49:28,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:49:28,605 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-10_03-49-28.log]
   [testng] 03:49:28,605 |-INFO in ch.qos.logback.core.sift.SiftProcessor@581dc0fc - End of configuration.
   [testng] [2024-11-10 03:49:36,520] [pool-1-thread-11] Initializing /data/brian/DBTRG 2X 1a-1.tif: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 43 seconds
Finished: SUCCESS