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Started by upstream project "BIOFORMATS-test-repo" build number 254 originally caused by: Started by upstream project "Trigger" build number 278 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins17797091713578151756.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_39984_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:21:50,982 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:21:50,983 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 00:21:50,983 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:50,984 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:50,985 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:21:50,985 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:21:50,986 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:21:50,986 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:50,986 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:50,987 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:21:50,987 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:21:50,987 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:21:51,158 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:21:51,158 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:21:51,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:21:51,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:21:51,187 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:21:51,187 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:21:51,188 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:21:51,188 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:21:51,188 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 00:21:51,189 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 00:21:51,189 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 203 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-13 00:21:51,198] [main] java.version = 17.0.2 [testng] 00:21:51,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:21:51,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:51,244 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-13_00-21-51.log] [testng] 00:21:51,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-11-13 00:21:51,248] [main] testng.directory = /data [testng] [2024-11-13 00:21:51,248] [main] testng.configDirectory = /config [testng] [2024-11-13 00:21:51,257] [main] testng.multiplier = 1.0 [testng] [2024-11-13 00:21:51,258] [main] testng.in-memory = false [testng] [2024-11-13 00:21:51,258] [main] testng.allow-missing = false [testng] [2024-11-13 00:21:51,258] [main] user.language = en [testng] [2024-11-13 00:21:51,258] [main] user.country = ${user.country} [testng] [2024-11-13 00:21:51,258] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-13 00:22:31,001] [main] ---------------------------------------- [testng] [2024-11-13 00:22:31,001] [main] Total files: 4426 [testng] [2024-11-13 00:22:31,002] [main] Scan time: 39.743 s (8 ms/file) [testng] [2024-11-13 00:22:31,002] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-13 00:36:20,234] [pool-1-thread-1] Initializing /data/wayne/apple.tif: [testng] 00:36:20,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:36:20,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:20,236 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-13_00-36-20.log] [testng] 00:36:20,236 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41fd3d8f - End of configuration. [testng] [2024-11-13 00:36:20,783] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z060.tif: [testng] 00:36:20,783 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:36:20,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:20,784 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-13_00-36-20.log] [testng] 00:36:20,785 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d144448 - End of configuration. [testng] [2024-11-13 00:36:21,130] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z033.tif: [testng] 00:36:21,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:36:21,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:21,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-13_00-36-21.log] [testng] 00:36:21,132 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ce73149 - End of configuration. [testng] [2024-11-13 00:36:21,691] [pool-1-thread-10] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] 00:36:21,691 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:36:21,691 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:21,692 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-13_00-36-21.log] [testng] 00:36:21,693 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57426f53 - End of configuration. [testng] [2024-11-13 00:36:22,119] [pool-1-thread-9] Initializing /data/curtis/test1.tiff: [testng] 00:36:22,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:36:22,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:22,120 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-13_00-36-22.log] [testng] 00:36:22,120 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65399f6b - End of configuration. [testng] [2024-11-13 00:36:22,868] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z005.tif: [testng] 00:36:22,868 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:36:22,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:22,869 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-13_00-36-22.log] [testng] 00:36:22,870 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79548bee - End of configuration. [testng] [2024-11-13 00:36:23,242] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x32.tiff: [testng] 00:36:23,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:36:23,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:23,243 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-13_00-36-23.log] [testng] 00:36:23,243 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bd9fc94 - End of configuration. [testng] [2024-11-13 00:36:23,549] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] 00:36:23,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:36:23,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:23,550 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-13_00-36-23.log] [testng] 00:36:23,550 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6fe6d3bf - End of configuration. [testng] [2024-11-13 00:36:23,814] [pool-1-thread-5] Initializing /data/ascb/CYT-35_FriendOsmiumEpididymis_4800.tif: [testng] 00:36:23,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:36:23,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:23,815 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-13_00-36-23.log] [testng] 00:36:23,815 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56761f6e - End of configuration. [testng] [2024-11-13 00:36:24,116] [pool-1-thread-4] Initializing /data/josiah/cell-Z34.C0.tiff: [testng] 00:36:24,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:36:24,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:24,117 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-13_00-36-24.log] [testng] 00:36:24,117 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3685f1a1 - End of configuration. [testng] [2024-11-13 00:36:24,494] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z034.tif: [testng] 00:36:24,494 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:36:24,494 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:24,495 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-13_00-36-24.log] [testng] 00:36:24,495 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25fb04a5 - End of configuration. [testng] [2024-11-13 00:36:24,762] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] 00:36:24,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:36:24,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:24,764 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-13_00-36-24.log] [testng] 00:36:24,764 |-INFO in ch.qos.logback.core.sift.SiftProcessor@726930d2 - End of configuration. [testng] [2024-11-13 00:36:30,131] [pool-1-thread-7] Initializing /data/public/condensation/E4.pattern5.tif: [testng] [2024-11-13 00:36:30,405] [pool-1-thread-9] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-11-13 00:36:30,637] [pool-1-thread-12] Initializing /data/martin/head.tif: [testng] [2024-11-13 00:36:31,141] [pool-1-thread-2] Initializing /data/curtis/imagesEight.tiff: [testng] [2024-11-13 00:36:31,395] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-11-13 00:36:31,587] [pool-1-thread-6] Initializing /data/michael/WonkyTrafficLight.tiff: [testng] [2024-11-13 00:36:31,810] [pool-1-thread-8] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-11-13 00:36:33,824] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] [2024-11-13 00:36:34,630] [pool-1-thread-10] Initializing /data/josiah/cell-Z28.C0.tiff: [testng] [2024-11-13 00:36:35,242] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x32.tiff: [testng] [2024-11-13 00:36:35,686] [pool-1-thread-11] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-11-13 00:36:38,813] [pool-1-thread-5] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-11-13 00:36:40,926] [pool-1-thread-9] Initializing /data/samples/melissa/imagej-last-ifd/Rat_Hippocampal_Neuron.tif: [testng] [2024-11-13 00:36:42,250] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z015.tif: [testng] [2024-11-13 00:36:43,254] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-11-13 00:36:44,004] [pool-1-thread-12] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-11-13 00:36:44,806] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] [2024-11-13 00:36:45,558] [pool-1-thread-11] Initializing /data/kevino/_BF_00004.tif: [testng] [2024-11-13 00:36:46,192] [pool-1-thread-1] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-11-13 00:36:46,999] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-11-13 00:36:47,724] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-11-13 00:36:48,834] [pool-1-thread-7] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-11-13 00:36:58,637] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-11-13 00:37:00,902] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z017.tif: [testng] [2024-11-13 00:37:02,063] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-11-13 00:37:03,414] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-11-13 00:37:04,641] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-02.tiff: [testng] [2024-11-13 00:37:06,076] [pool-1-thread-11] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-11-13 00:37:07,251] [pool-1-thread-10] Initializing /data/marc/ball48_original_10x.tif: [testng] [2024-11-13 00:37:07,735] [pool-1-thread-3] Initializing /data/josh/NESb_C2_TP8.tiff: [testng] [2024-11-13 00:37:08,761] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z043.tif: [testng] [2024-11-13 00:37:09,659] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-11-13 00:37:14,132] [pool-1-thread-5] Initializing /data/qa-4745/LIBPB476_Figure 1_H_NA_21879.tiff: [testng] [2024-11-13 00:37:16,017] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-11-13 00:37:17,291] [pool-1-thread-9] Initializing /data/public/condensation/A1.pattern2.tif: [testng] [2024-11-13 00:37:19,062] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z045.tif: [testng] [2024-11-13 00:37:20,496] [pool-1-thread-6] Initializing /data/josiah/cell-Z5.C1.tiff: [testng] [2024-11-13 00:37:21,972] [pool-1-thread-10] Initializing /data/brian/Ch1_fld1.tif: [testng] [2024-11-13 00:37:23,670] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-11-13 00:37:25,234] [pool-1-thread-3] Initializing /data/josiah/cell-Z36.C1.tiff: [testng] [2024-11-13 00:37:26,757] [pool-1-thread-12] Initializing /data/boguslaw/Arabidopsis_large.tif: [testng] [2024-11-13 00:37:28,155] [pool-1-thread-8] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-11-13 00:37:29,390] [pool-1-thread-11] Initializing /data/josh/NESb_C2_TP10.tiff: [testng] [2024-11-13 00:37:35,901] [pool-1-thread-2] Initializing /data/samples/cielab/Ski_TC8-03_ROMM_lab.tif: [testng] [2024-11-13 00:37:37,590] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x64.tiff: [testng] [2024-11-13 00:37:39,384] [pool-1-thread-9] Initializing 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[pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-11-13 00:46:38,156] [pool-1-thread-6] Initializing /data/damian/18m.tiff: [testng] [2024-11-13 00:46:38,834] [pool-1-thread-11] Initializing /data/damian/30m.tiff: [testng] [2024-11-13 00:46:39,053] [pool-1-thread-2] Initializing /data/chris-lesiak/half-float.tiff: [testng] [2024-11-13 00:46:39,330] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z029.tif: [testng] [2024-11-13 00:46:39,519] [pool-1-thread-8] Initializing /data/darwinjob/SESSION4_Image2.tif: [testng] [2024-11-13 00:46:39,775] [pool-1-thread-5] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-11-13 00:46:39,932] [pool-1-thread-10] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-11-13 00:46:40,074] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-11-13 00:46:40,228] [pool-1-thread-4] Initializing 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[pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-11-13 00:47:00,705] [pool-1-thread-10] Initializing /data/josiah/cell-Z32.C1.tiff: [testng] [2024-11-13 00:47:01,762] [pool-1-thread-4] Initializing /data/public/libtiff/quad-tile.tif: [testng] [2024-11-13 00:47:03,051] [pool-1-thread-8] Initializing /data/tobias/test002_1.tif: [testng] [2024-11-13 00:47:06,245] [pool-1-thread-11] Initializing /data/josiah/cell-Z39.C0.tiff: [testng] [2024-11-13 00:47:07,052] [pool-1-thread-9] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-11-13 00:47:07,273] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z024.tif: [testng] [2024-11-13 00:47:07,462] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs001.TIF: [testng] [2024-11-13 00:47:07,616] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs016.TIF: [testng] [2024-11-13 00:47:07,782] [pool-1-thread-10] Initializing 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Initializing /data/josiah/cell-Z30.C1.tiff: [testng] [2024-11-13 00:47:18,991] [pool-1-thread-10] Initializing /data/damian/12m.tiff: [testng] [2024-11-13 00:47:19,205] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x48.tiff: [testng] [2024-11-13 00:47:19,369] [pool-1-thread-12] Initializing /data/public/libtiff/cramps-tile.tif: [testng] [2024-11-13 00:47:19,518] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z019.tif: [testng] [2024-11-13 00:47:19,776] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x32.tiff: [testng] [2024-11-13 00:47:21,480] [pool-1-thread-8] Initializing /data/brian/Alx-488-pk.tif: [testng] [2024-11-13 00:47:22,789] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-11-13 00:47:23,950] [pool-1-thread-9] Initializing /data/edward/TestDoc2.tif: [testng] [2024-11-13 00:47:24,563] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z001.tif: [testng] [2024-11-13 00:47:25,188] [pool-1-thread-2] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-11-13 00:47:25,487] [pool-1-thread-4] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-11-13 00:47:25,820] [pool-1-thread-12] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-11-13 00:47:26,009] [pool-1-thread-10] Initializing /data/boguslaw/Arabidopsis.tiff: [testng] [2024-11-13 00:47:26,186] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-11-13 00:47:27,242] [pool-1-thread-1] Initializing /data/wayne/screen-rgb.tiff: [testng] [2024-11-13 00:47:28,077] [pool-1-thread-8] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-11-13 00:47:29,420] [pool-1-thread-5] Initializing /data/josiah/cell-Z15.C0.tiff: [testng] [2024-11-13 00:47:29,698] [pool-1-thread-7] Initializing /data/josiah/cell-Z4.C1.tiff: [testng] [2024-11-13 00:47:30,019] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z044.tif: [testng] [2024-11-13 00:47:30,736] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] [2024-11-13 00:47:31,098] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-11-13 00:47:31,892] [pool-1-thread-10] Initializing /data/josiah/cell-Z26.C0.tiff: [testng] [2024-11-13 00:47:32,198] [pool-1-thread-4] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-11-13 00:47:32,489] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x16.tiff: [testng] [2024-11-13 00:47:32,743] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-11-13 00:47:34,300] [pool-1-thread-5] Initializing /data/samples/melissa/imagej-4gb/4gb-test&sizeX=1024&sizeY=1024&pixelType=uint16&sizeC=2050.fake: [testng] [2024-11-13 00:47:34,485] [pool-1-thread-7] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-11-13 00:47:34,757] [pool-1-thread-9] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-11-13 00:47:37,205] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] [2024-11-13 00:47:37,516] [pool-1-thread-2] Initializing /data/josh/NESb_C2_TP4.tiff: [testng] [2024-11-13 00:47:37,974] [pool-1-thread-3] Initializing /data/josiah/cell-Z19.C0.tiff: [testng] [2024-11-13 00:47:38,315] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-11-13 00:47:38,699] [pool-1-thread-12] Initializing /data/kevino/_BF_00001.tif: [testng] [2024-11-13 00:47:40,948] [pool-1-thread-10] Initializing /data/josiah/cell-Z2.C0.tiff: [testng] [2024-11-13 00:47:41,219] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-11-13 00:47:41,603] [pool-1-thread-4] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-11-13 00:47:42,554] [pool-1-thread-11] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-11-13 00:47:42,987] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z036.tif: [testng] [2024-11-13 00:47:44,026] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z025.tif: [testng] [2024-11-13 00:47:44,514] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x48.tiff: [testng] [2024-11-13 00:47:44,768] [pool-1-thread-2] Initializing /data/samples/melissa/long8-subfiletype/Cell_Colony.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 26 minutes 28 seconds Finished: SUCCESS