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Started by upstream project "BIOFORMATS-test-repo" build number 255
originally caused by:
 Started by upstream project "Trigger" build number 279
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins14252576660102559209.sh
+ '[' avi = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_40222_merge_ci -v /uod/idr/repos/curated/avi:/data -v /uod/idr-scratch/merge-ci/curated/avi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
    [javac] 4 warnings

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:46:13,219 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:46:13,221 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service.
   [testng] 01:46:13,221 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:46:13,222 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:46:13,222 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:46:13,222 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:46:13,223 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:46:13,223 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:46:13,223 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:46:13,224 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:46:13,224 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:46:13,224 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:46:13,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:46:13,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:46:13,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:46:13,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:46:13,423 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:46:13,423 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:46:13,423 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:46:13,424 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:46:13,424 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration.
   [testng] 01:46:13,425 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point
   [testng] 01:46:13,425 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 202 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-14 01:46:13,438] [main] java.version = 21
   [testng] 01:46:13,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:46:13,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:46:13,483 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-14_01-46-13.log]
   [testng] 01:46:13,485 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration.
   [testng] [2024-11-14 01:46:13,486] [main] testng.directory = /data
   [testng] [2024-11-14 01:46:13,487] [main] testng.configDirectory = /config
   [testng] [2024-11-14 01:46:13,495] [main] testng.multiplier = 1.0
   [testng] [2024-11-14 01:46:13,496] [main] testng.in-memory = false
   [testng] [2024-11-14 01:46:13,496] [main] testng.allow-missing = false
   [testng] [2024-11-14 01:46:13,496] [main] user.language = en
   [testng] [2024-11-14 01:46:13,496] [main] user.country = ${user.country}
   [testng] [2024-11-14 01:46:13,496] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-11-14 01:46:22,611] [main] ----------------------------------------
   [testng] [2024-11-14 01:46:22,611] [main] Total files: 40
   [testng] [2024-11-14 01:46:22,611] [main] Scan time: 9.115 s (227 ms/file)
   [testng] [2024-11-14 01:46:22,611] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 38 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-14 01:47:08,936] [pool-1-thread-1] Initializing /data/william/worm.avi: 
   [testng] 01:47:08,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:47:08,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:08,938 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-14_01-47-08.log]
   [testng] 01:47:08,938 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f10ed89 - End of configuration.
   [testng] [2024-11-14 01:47:09,112] [pool-1-thread-12] Initializing /data/kurt/40x_6um.avi: 
   [testng] 01:47:09,112 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:47:09,112 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:09,113 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-14_01-47-09.log]
   [testng] 01:47:09,113 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a351962 - End of configuration.
   [testng] [2024-11-14 01:47:09,354] [pool-1-thread-11] Initializing /data/ascb/TIRF.avi: 
   [testng] 01:47:09,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:47:09,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:09,355 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-14_01-47-09.log]
   [testng] 01:47:09,355 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d997038 - End of configuration.
   [testng] [2024-11-14 01:47:09,553] [pool-1-thread-10] Initializing /data/jcb/JCB 201203159/JCB_201203159_0_4.avi: 
   [testng] 01:47:09,554 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:47:09,554 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:09,554 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-14_01-47-09.log]
   [testng] 01:47:09,555 |-INFO in ch.qos.logback.core.sift.SiftProcessor@267d0c09 - End of configuration.
   [testng] [2024-11-14 01:47:09,716] [pool-1-thread-9] Initializing /data/qa-7560/Ex9 ALADIN WT KO KI_DIC_ 31_07_2013_M1.avi: 
   [testng] 01:47:09,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:47:09,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:09,717 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-14_01-47-09.log]
   [testng] 01:47:09,717 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d8050c2 - End of configuration.
   [testng] [2024-11-14 01:47:10,390] [pool-1-thread-8] Initializing /data/jcb/JCB 201203159/JCB_201203159_0_5.avi: 
   [testng] 01:47:10,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:47:10,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:10,391 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-14_01-47-10.log]
   [testng] 01:47:10,391 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d0cfef0 - End of configuration.
   [testng] [2024-11-14 01:47:10,532] [pool-1-thread-7] Initializing /data/curtis/mri-stack-ij-new.avi: 
   [testng] 01:47:10,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:47:10,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:10,533 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-14_01-47-10.log]
   [testng] 01:47:10,533 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45ea24f3 - End of configuration.
   [testng] [2024-11-14 01:47:10,779] [pool-1-thread-6] Initializing /data/jcb/JCB 201203159/JCB_201203159_0_3.avi: 
   [testng] 01:47:10,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:47:10,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:10,780 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-14_01-47-10.log]
   [testng] 01:47:10,780 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f09eb07 - End of configuration.
   [testng] [2024-11-14 01:47:11,036] [pool-1-thread-5] Initializing /data/simon/24_bit_problem.avi: 
   [testng] 01:47:11,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:47:11,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:11,037 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-14_01-47-11.log]
   [testng] 01:47:11,038 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ef44d05 - End of configuration.
   [testng] [2024-11-14 01:47:11,351] [pool-1-thread-4] Initializing /data/chip_avi/Level003-DB-089.avi: 
   [testng] 01:47:11,351 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:47:11,351 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:11,352 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-14_01-47-11.log]
   [testng] 01:47:11,352 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59898e76 - End of configuration.
   [testng] [2024-11-14 01:47:11,625] [pool-1-thread-3] Initializing /data/qa-11011/M-flow10001.avi: 
   [testng] 01:47:11,626 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:47:11,626 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:11,626 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-14_01-47-11.log]
   [testng] 01:47:11,627 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4640ffb4 - End of configuration.
   [testng] [2024-11-14 01:47:11,957] [pool-1-thread-2] Initializing /data/roger/spheroid1-crop.lsm movie 2.avi: 
   [testng] 01:47:11,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:47:11,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:47:11,958 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-14_01-47-11.log]
   [testng] 01:47:11,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43ae7d13 - End of configuration.
   [testng] [2024-11-14 01:47:15,818] [pool-1-thread-6] Initializing /data/chip_avi/Level002-DB-090.avi: 
   [testng] [2024-11-14 01:47:16,068] [pool-1-thread-8] Initializing /data/qa-5019/nemo-2_1_.avi: 
   [testng] [2024-11-14 01:47:16,353] [pool-1-thread-10] Initializing /data/qa-4232/11051920xdrywithincubatoronthenoff_Subset.avi: 
   [testng] [2024-11-14 01:47:16,695] [pool-1-thread-1] Initializing /data/curtis/mri-stack-ij-old.avi: 
   [testng] [2024-11-14 01:47:16,965] [pool-1-thread-7] Initializing /data/qa-7450/MVI_3610.AVI: 
   [testng] [2024-11-14 01:47:17,303] [pool-1-thread-4] Initializing /data/jae/20xD_5minfor14h.avi: 
   [testng] [2024-11-14 01:47:17,732] [pool-1-thread-3] Initializing /data/roger/spheroid1.lsm movie.avi: 
   [testng] [2024-11-14 01:47:18,082] [pool-1-thread-11] Initializing /data/qa-5019/nemo-2_10_20.avi: 
   [testng] [2024-11-14 01:47:18,292] [pool-1-thread-2] Initializing /data/roger/op9middle40x.lsm movie 4.avi: 
   [testng] [2024-11-14 01:47:18,494] [pool-1-thread-5] Initializing /data/chris/APZ04_009.avi: 
   [testng] [2024-11-14 01:47:19,555] [pool-1-thread-12] Initializing /data/prairie/cornea dc and macs.AVI: 
   [testng] [2024-11-14 01:47:21,561] [pool-1-thread-9] Initializing /data/chip_avi/Level001-ES-083.avi: 
   [testng] [2024-11-14 01:47:21,774] [pool-1-thread-1] Initializing /data/roger/op9middle40x.lsm movie.avi: 
   [testng] [2024-11-14 01:47:22,064] [pool-1-thread-6] Initializing /data/sample-avis/extra-chunk/HyperStack.avi: 
   [testng] [2024-11-14 01:47:22,382] [pool-1-thread-8] Initializing /data/kurt/63x_6um.avi: 
   [testng] [2024-11-14 01:47:22,712] [pool-1-thread-11] Initializing /data/roger/op9middle40x.lsm movie 3.avi: 
   [testng] [2024-11-14 01:47:22,991] [pool-1-thread-10] Initializing /data/curtis/mri-stack-bf.avi: 
   [testng] [2024-11-14 01:47:23,242] [pool-1-thread-3] Initializing /data/jules/GUV_long15N_10_10mb_debut_26102011_4.avi: 
   [testng] [2024-11-14 01:47:24,719] [pool-1-thread-2] Initializing /data/pki/yinghua_USPI2-ASMKT772_111017100001_C10_f1.avi: 
   [testng] [2024-11-14 01:47:25,010] [pool-1-thread-7] Initializing /data/roger/op9middle40x.lsm movie 2.avi: 
   [testng] [2024-11-14 01:47:26,129] [pool-1-thread-12] Initializing /data/roger/spheroid1-crop.lsm movie.avi: 
   [testng] [2024-11-14 01:47:26,450] [pool-1-thread-4] Initializing /data/kurt/40x_6um_2.avi: 
   [testng] [2024-11-14 01:47:27,200] [pool-1-thread-9] Initializing /data/chip_avi/Level004-WA-116.avi: 
   [testng] [2024-11-14 01:47:28,522] [pool-1-thread-6] Initializing /data/jules/GUV_long15N_10_20mb_debut_25102011_1_BW.avi: 
   [testng] [2024-11-14 01:47:28,871] [pool-1-thread-1] Initializing /data/sample-avis/rgb-odd-width/HyperStack.avi: 
   [testng] [2024-11-14 01:47:29,188] [pool-1-thread-10] Initializing /data/qa-7336/2X_63X-DAPI-Emilin2_Filter_Render_Series.avi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 2014, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 1 minute 25 seconds
Finished: SUCCESS