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Started by upstream project "BIOFORMATS-test-repo" build number 30 originally caused by: Started by upstream project "Trigger" build number 33 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins3590461006273579510.sh + '[' leica-lif = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_4067_merge_ci -v /uod/idr/repos/curated/leica-lif:/data -v /uod/idr-scratch/merge-ci/curated/leica-lif:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 02:48:24,661 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:48:24,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 02:48:24,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:48:24,664 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:48:24,664 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:48:24,664 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:48:24,665 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:48:24,665 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:48:24,665 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:48:24,666 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:48:24,666 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:48:24,666 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:48:24,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:48:24,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:48:24,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:48:24,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:48:24,875 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:48:24,875 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:48:24,875 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:48:24,875 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:48:24,875 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 02:48:24,876 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 02:48:24,876 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 211 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-11 02:48:24,885] [main] java.version = 21 [testng] 02:48:24,888 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:48:24,888 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:48:24,927 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-11_02-48-24.log] [testng] 02:48:24,928 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-04-11 02:48:24,930] [main] testng.directory = /data [testng] [2024-04-11 02:48:24,930] [main] testng.configDirectory = /config [testng] [2024-04-11 02:48:24,938] [main] testng.multiplier = 1.0 [testng] [2024-04-11 02:48:24,939] [main] testng.in-memory = false [testng] [2024-04-11 02:48:24,939] [main] testng.allow-missing = false [testng] [2024-04-11 02:48:24,939] [main] user.language = en [testng] [2024-04-11 02:48:24,939] [main] user.country = ${user.country} [testng] [2024-04-11 02:48:24,939] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-04-11 02:52:31,111] [main] ---------------------------------------- [testng] [2024-04-11 02:52:31,111] [main] Total files: 402 [testng] [2024-04-11 02:52:31,111] [main] Scan time: 246.172 s (612 ms/file) [testng] [2024-04-11 02:52:31,111] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 266 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-11 02:54:02,916] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y5.tif: [testng] 02:54:02,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:54:02,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:02,918 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-11_02-54-02.log] [testng] 02:54:02,918 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29f3a491 - End of configuration. [testng] [2024-04-11 02:54:02,963] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y3.tif: [testng] 02:54:02,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:54:02,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:02,964 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-11_02-54-02.log] [testng] 02:54:02,965 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5adfc0a1 - End of configuration. [testng] [2024-04-11 02:54:03,003] [pool-1-thread-11] Initializing /data/qa-16911/DM6000_colour-camera-12bit.lif: [testng] 02:54:03,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:54:03,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:03,004 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-11_02-54-03.log] [testng] 02:54:03,005 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d54c614 - End of configuration. [testng] [2024-04-11 02:54:03,050] [pool-1-thread-10] Initializing /data/vytas/B6 mo2 g9c8 act tc DiD 20mil 24hrs after inj rbc DiI.lif: [testng] 02:54:03,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:54:03,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:03,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-11_02-54-03.log] [testng] 02:54:03,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b2a09d6 - End of configuration. [testng] [2024-04-11 02:54:04,206] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y2.tif: [testng] 02:54:04,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:54:04,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:04,207 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-11_02-54-04.log] [testng] 02:54:04,208 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c731057 - End of configuration. [testng] [2024-04-11 02:54:04,248] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y0.tif: [testng] 02:54:04,248 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:54:04,248 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:04,248 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-11_02-54-04.log] [testng] 02:54:04,249 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e64a876 - End of configuration. [testng] [2024-04-11 02:54:04,305] [pool-1-thread-7] Initializing /data/pki/RA4 P3 x63.lif: [testng] 02:54:04,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:54:04,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:04,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-11_02-54-04.log] [testng] 02:54:04,306 |-INFO in ch.qos.logback.core.sift.SiftProcessor@141a0d8 - End of configuration. [testng] [2024-04-11 02:54:04,329] [pool-1-thread-6] Initializing /data/vytas/Image002_ch00.tif: [testng] 02:54:04,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:54:04,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:04,330 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-11_02-54-04.log] [testng] 02:54:04,331 |-INFO in ch.qos.logback.core.sift.SiftProcessor@634521fc - End of configuration. [testng] [2024-04-11 02:54:04,362] [pool-1-thread-5] Initializing /data/peter/20110916D.lif: [testng] 02:54:04,362 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:54:04,362 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:04,363 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-11_02-54-04.log] [testng] 02:54:04,363 |-INFO in ch.qos.logback.core.sift.SiftProcessor@588315ed - End of configuration. [testng] [2024-04-11 02:54:05,928] [pool-1-thread-4] Initializing /data/jcb/JCB 201112145/Figure 5A.lif: [testng] 02:54:05,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:54:05,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:05,929 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-11_02-54-05.log] [testng] 02:54:05,930 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28ac3eba - End of configuration. [testng] [2024-04-11 02:54:05,978] [pool-1-thread-3] Initializing /data/schek/Experiment_001_2010.lif: [testng] 02:54:05,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:54:05,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:05,978 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-11_02-54-05.log] [testng] 02:54:05,979 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c8e18f7 - End of configuration. [testng] [2024-04-11 02:54:05,997] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y9.tif: [testng] 02:54:05,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:54:05,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:05,998 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-11_02-54-05.log] [testng] 02:54:05,998 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3895a95b - End of configuration. [testng] [2024-04-11 02:54:07,789] [pool-1-thread-3] Initializing /data/vytas/Experiment not horrid.lif: [testng] [2024-04-11 02:54:08,126] [pool-1-thread-1] Initializing /data/garcion/testTwo.lif: [testng] [2024-04-11 02:54:08,154] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y0.tif: [testng] [2024-04-11 02:54:08,204] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y7.tif: [testng] [2024-04-11 02:54:08,361] [pool-1-thread-12] Initializing /data/nicolas/Experiment.lif: [testng] [2024-04-11 02:54:10,688] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y3.tif: [testng] [2024-04-11 02:54:10,745] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y2.tif: [testng] [2024-04-11 02:54:10,879] [pool-1-thread-7] Initializing /data/andrew/FRAP_Test_12-0808.lif: [testng] [2024-04-11 02:54:11,162] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y8.tif: [testng] [2024-04-11 02:54:11,453] [pool-1-thread-9] Initializing /data/martin/110921 Goedele.lif: [testng] [2024-04-11 02:54:12,304] [pool-1-thread-2] Initializing /data/olivier/STAGE CONFIG1.lif: [testng] [2024-04-11 02:54:12,478] [pool-1-thread-1] Initializing /data/andrew/Snapshots_150908.lif: [testng] [2024-04-11 02:54:12,879] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y3.tif: [testng] [2024-04-11 02:54:12,930] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y8.tif: [testng] [2024-04-11 02:54:13,429] [pool-1-thread-4] Initializing /data/christian/20090323illutest_BFmisaligned.lif: [testng] [2024-04-11 02:54:13,564] [pool-1-thread-2] Initializing /data/jcb/201003021_Fig8B.lif: [testng] [2024-04-11 02:54:13,899] [pool-1-thread-8] Initializing /data/melissa/roi-test-1.lif: [testng] [2024-04-11 02:54:14,044] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y7.tif: [testng] [2024-04-11 02:54:14,234] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y0.tif: [testng] [2024-04-11 02:54:14,700] [pool-1-thread-8] Initializing /data/jcb/JCB 201112145/Figure 3A.lif: [testng] [2024-04-11 02:54:14,912] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y3.tif: [testng] [2024-04-11 02:54:14,947] [pool-1-thread-7] Initializing /data/tony/December_806b.lif: [testng] [2024-04-11 02:54:15,349] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y9.tif: [testng] [2024-04-11 02:54:15,460] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y0.tif: [testng] [2024-04-11 02:54:15,514] [pool-1-thread-4] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch2.avi: [testng] [2024-04-11 02:54:15,953] [pool-1-thread-4] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/Wrong Order Montage.tif: [testng] [2024-04-11 02:54:16,013] [pool-1-thread-2] Initializing /data/andrew/Series 68 Multi from Importer.tif: [testng] [2024-04-11 02:54:18,485] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y5.tif: [testng] [2024-04-11 02:54:18,546] [pool-1-thread-6] Initializing /data/fabrice/Clipboard-1.jpg: [testng] [2024-04-11 02:54:18,555] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y9.tif: [testng] [2024-04-11 02:54:18,611] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y3.tif: [testng] [2024-04-11 02:54:18,672] [pool-1-thread-1] Initializing /data/alex/2010-11-29-test-for-OME.lif: [testng] [2024-04-11 02:54:18,790] [pool-1-thread-11] Initializing /data/vytas/Experiment2.lif: [testng] [2024-04-11 02:54:18,816] [pool-1-thread-4] Initializing /data/christophe/01_4C1Z.lif: [testng] [2024-04-11 02:54:19,047] [pool-1-thread-6] Initializing /data/qa-3859/LSItoday.lif: [testng] [2024-04-11 02:54:19,561] [pool-1-thread-11] Initializing /data/stefan/p24b-v1240.lif: [testng] [2024-04-11 02:54:19,621] [pool-1-thread-1] Initializing /data/jcb/201007044/Figure 4C - F505.lif: [testng] [2024-04-11 02:54:19,784] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y6.tif: [testng] [2024-04-11 02:54:19,895] [pool-1-thread-3] Initializing /data/fabrice/test 2.lif: [testng] [2024-04-11 02:54:24,086] [pool-1-thread-8] Initializing /data/fabrice/09-10-23 Tete de mouche.lif: [testng] [2024-04-11 02:54:24,137] [pool-1-thread-7] Initializing /data/olivier/120404_Li011_200V.lif: [testng] [2024-04-11 02:54:24,167] [pool-1-thread-10] Initializing /data/jcb/201007044/Figure 4D - F761.lif: [testng] [2024-04-11 02:54:24,213] [pool-1-thread-1] Initializing /data/matthias/ms-first tests.lif: [testng] [2024-04-11 02:54:24,449] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y5.tif: [testng] [2024-04-11 02:54:24,694] [pool-1-thread-11] Initializing /data/melissa/LIF2_test-with-ROIs.lif: [testng] [2024-04-11 02:54:24,735] [pool-1-thread-10] Initializing /data/andrew/Series 68 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02:54:53,511] [pool-1-thread-11] Initializing /data/garcion/testOne.lif: [testng] [2024-04-11 02:54:53,602] [pool-1-thread-7] Initializing /data/andrew/Snapshots_1kx1k_150908.lif: [testng] [2024-04-11 02:54:53,863] [pool-1-thread-1] Initializing /data/tony/20070413FLIMtest.lif: [testng] [2024-04-11 02:54:54,161] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y6.tif: [testng] [2024-04-11 02:54:54,636] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y0.tif: [testng] [2024-04-11 02:54:54,714] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y3.tif: [testng] [2024-04-11 02:54:54,756] [pool-1-thread-11] Initializing /data/andrew/LIF Lambda/Lambda 1.lif: [testng] [2024-04-11 02:54:54,808] [pool-1-thread-9] Initializing /data/fabrice/Rosier.lif: [testng] [2024-04-11 02:54:55,161] [pool-1-thread-8] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order.tif: [testng] [2024-04-11 02:54:55,379] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y3.tif: [testng] [2024-04-11 02:54:55,518] [pool-1-thread-9] Initializing /data/martin-hoehne/Niere-Schnitt5.lif: [testng] [2024-04-11 02:54:55,759] [pool-1-thread-2] Initializing /data/jcb/JCB 201112145/Figure 5B.lif: [testng] [2024-04-11 02:54:55,788] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y5.tif: [testng] [2024-04-11 02:54:55,888] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y6.tif: [testng] [2024-04-11 02:54:55,976] [pool-1-thread-9] Initializing /data/vytas/030510-esxA-mCherry 3.lif: [testng] [2024-04-11 02:54:56,845] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y2.tif: [testng] [2024-04-11 02:54:56,879] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y8.tif: [testng] [2024-04-11 02:54:56,929] [pool-1-thread-2] Initializing /data/qa-21092/1-GBP1-CaaX+LLoMe.lif: [testng] [2024-04-11 02:54:57,009] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y5.tif: [testng] [2024-04-11 02:54:57,225] [pool-1-thread-1] Initializing /data/stefan/p24b.lif: [testng] [2024-04-11 02:54:57,390] [pool-1-thread-8] Initializing /data/stefan/Rx3GFP280907.lif: [testng] [2024-04-11 02:54:57,692] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y7.tif: [testng] [2024-04-11 02:54:58,056] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y4.tif: [testng] [2024-04-11 02:54:58,100] [pool-1-thread-11] Initializing /data/christian/20090323fluoresceinRPMI.lif: [testng] [2024-04-11 02:54:58,252] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y4.tif: [testng] [2024-04-11 02:54:58,361] [pool-1-thread-7] Initializing /data/olivier/tiled/Experiment1_TileOnly.lif: [testng] [2024-04-11 02:54:58,833] [pool-1-thread-11] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP000_1um.png: [testng] [2024-04-11 02:54:58,841] [pool-1-thread-2] Initializing /data/melissa/roi-test-1.xml: [testng] [2024-04-11 02:54:59,085] [pool-1-thread-1] Initializing /data/stefan/p24_dfc.lif: [testng] [2024-04-11 02:54:59,110] [pool-1-thread-3] Initializing /data/andrew/LIF Lambda/Image J Grab.tiff: [testng] [2024-04-11 02:54:59,235] [pool-1-thread-2] Initializing /data/jcb/Figure 1A.lif: [testng] [2024-04-11 02:54:59,564] [pool-1-thread-1] Initializing /data/sagar/forMelissa.lif: [testng] [2024-04-11 02:54:59,790] [pool-1-thread-2] Initializing /data/alexander/20120224.lif: [testng] [2024-04-11 02:55:00,710] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y9.tif: [testng] [2024-04-11 02:55:00,964] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y6.tif: [testng] [2024-04-11 02:55:01,101] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y8.tif: [testng] [2024-04-11 02:55:02,053] [pool-1-thread-8] Initializing /data/public/michael/PR2729_frameOrderCombinedScanTypes.lif: [testng] [2024-04-11 02:55:02,220] [pool-1-thread-11] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch1.avi: [testng] [2024-04-11 02:55:02,236] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y0.tif: [testng] [2024-04-11 02:55:02,273] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y7.tif: [testng] [2024-04-11 02:55:02,378] [pool-1-thread-1] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP001_2_5um.png: [testng] [2024-04-11 02:55:02,535] [pool-1-thread-3] Initializing /data/schek/Experiment_001.lif: [testng] [2024-04-11 02:55:02,709] [pool-1-thread-11] Initializing /data/jcb/JCB 201203109/FIG 2D STAT3-EYFP CNTF.lif: [testng] [2024-04-11 02:55:03,017] [pool-1-thread-2] Initializing /data/martin-hoehne/Niere-Schnitt-GFP-dTomato.lif: [testng] [2024-04-11 02:55:03,332] [pool-1-thread-8] Initializing /data/qa-10917/P2P-MS2-lacZ.lif: [testng] [2024-04-11 02:55:03,456] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y2.tif: [testng] [2024-04-11 02:55:03,635] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y5.tif: [testng] [2024-04-11 02:55:03,868] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y4.tif: [testng] [2024-04-11 02:55:04,365] [pool-1-thread-10] Initializing /data/tommaso/Midollo GFAP 27.10.10 OXA+PEA 40x.lif: [testng] [2024-04-11 02:55:04,409] [pool-1-thread-1] Initializing /data/vytas/LIFtest.lif: [testng] [2024-04-11 02:55:04,648] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y8.tif: [testng] [2024-04-11 02:55:04,815] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y8.tif: [testng] [2024-04-11 02:55:05,049] [pool-1-thread-8] Initializing /data/andrew/FRAP_Test_250708.lif: [testng] [2024-04-11 02:55:05,361] [pool-1-thread-10] Initializing /data/schek/LIF2_test.lif: [testng] [2024-04-11 02:55:05,708] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y2.tif: [testng] [2024-04-11 02:55:05,750] [pool-1-thread-11] Initializing /data/mario/2007-11-13_DMEM_GFPcells.lif: [testng] [2024-04-11 02:55:06,045] [pool-1-thread-1] Initializing /data/sebastian/sebHaase.lif: [testng] [2024-04-11 02:55:06,565] [pool-1-thread-1] Initializing /data/matthias/experiment_020.lif: [testng] [2024-04-11 02:55:06,622] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y3.tif: [testng] [2024-04-11 02:55:06,967] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y2.tif: [testng] [2024-04-11 02:55:07,165] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y8.tif: [testng] [2024-04-11 02:55:07,277] [pool-1-thread-3] Initializing /data/qa-4791/TestFlorianDescription2.lif: [testng] [2024-04-11 02:55:07,286] [pool-1-thread-1] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch1.avi: [testng] [2024-04-11 02:55:07,587] [pool-1-thread-3] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch3.avi: [testng] [2024-04-11 02:55:07,694] [pool-1-thread-10] Initializing /data/oliver/Multi-channel Measurements.lif: [testng] [2024-04-11 02:55:07,807] [pool-1-thread-1] Initializing /data/qa-6635/2013_03_01_MLH1_SYCP3_HSPA2_16dpc_SC.lif: [testng] [2024-04-11 02:55:07,952] [pool-1-thread-2] Initializing /data/tony/Scanerror.lif: [testng] [2024-04-11 02:55:08,119] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y7.tif: [testng] [2024-04-11 02:55:08,295] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y9.tif: [testng] [2024-04-11 02:55:08,511] [pool-1-thread-1] Initializing /data/claude/1A.lif: [testng] [2024-04-11 02:55:12,485] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y5.tif: [testng] [2024-04-11 02:55:12,542] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y6.tif: [testng] [2024-04-11 02:55:12,663] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y7.tif: [testng] [2024-04-11 02:55:13,396] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y1.tif: [testng] [2024-04-11 02:55:13,550] [pool-1-thread-11] Initializing /data/andrew/LIF Lambda/Montage of Alexa 488 Lambda.tif: [testng] [2024-04-11 02:55:13,735] [pool-1-thread-2] Initializing /data/jcb/201007044/Figure 4C - F761.lif: [testng] [2024-04-11 02:55:13,923] [pool-1-thread-2] Initializing /data/christophe/test_greys.lif: [testng] [2024-04-11 02:55:14,060] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y3.tif: [testng] [2024-04-11 02:55:14,159] [pool-1-thread-3] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Wrong Order Merge.avi: [testng] [2024-04-11 02:55:14,475] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y7.tif: [testng] [2024-04-11 02:55:14,600] [pool-1-thread-3] Initializing /data/jerome/E346_316.lif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 14098, Failures: 5, Skips: 0 [testng] =============================================== [testng] [testng] The tests failed. BUILD FAILED /bio-formats-build/bioformats/components/test-suite/build.xml:270: if=failedTest Total time: 9 minutes 21 seconds Build step 'Execute shell' marked build as failure Finished: FAILURE