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Started by upstream project "BIOFORMATS-test-repo" build number 258
originally caused by:
 Started by upstream project "Trigger" build number 282
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins6374828766960156319.sh
+ '[' cellr = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_40778_merge_ci -v /uod/idr/repos/curated/cellr:/data -v /uod/idr-scratch/merge-ci/curated/cellr:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 03:57:16,431 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 03:57:16,432 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
   [testng] 03:57:16,432 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:57:16,433 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:57:16,434 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 03:57:16,434 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 03:57:16,434 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 03:57:16,434 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:57:16,435 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:57:16,436 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 03:57:16,436 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 03:57:16,436 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 03:57:16,609 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 03:57:16,609 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 03:57:16,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 03:57:16,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 03:57:16,640 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 03:57:16,640 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 03:57:16,640 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 03:57:16,641 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 03:57:16,641 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
   [testng] 03:57:16,642 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
   [testng] 03:57:16,642 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 207 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-17 03:57:16,652] [main] java.version = 17.0.2
   [testng] 03:57:16,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 03:57:16,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:57:16,699 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-17_03-57-16.log]
   [testng] 03:57:16,701 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
   [testng] [2024-11-17 03:57:16,703] [main] testng.directory = /data
   [testng] [2024-11-17 03:57:16,703] [main] testng.configDirectory = /config
   [testng] [2024-11-17 03:57:16,712] [main] testng.multiplier = 1.0
   [testng] [2024-11-17 03:57:16,713] [main] testng.in-memory = false
   [testng] [2024-11-17 03:57:16,713] [main] testng.allow-missing = false
   [testng] [2024-11-17 03:57:16,713] [main] user.language = en
   [testng] [2024-11-17 03:57:16,713] [main] user.country = ${user.country}
   [testng] [2024-11-17 03:57:16,713] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-11-17 03:58:43,893] [main] ----------------------------------------
   [testng] [2024-11-17 03:58:43,893] [main] Total files: 256
   [testng] [2024-11-17 03:58:43,894] [main] Scan time: 87.179 s (340 ms/file)
   [testng] [2024-11-17 03:58:43,894] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-17 04:01:55,937] [pool-1-thread-1] Initializing /data/qa-17107/LifeScienceDemo/LifeScienceDemoSTAR_d.mtb: 
   [testng] 04:01:55,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 04:01:55,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:55,938 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-17_04-01-55.log]
   [testng] 04:01:55,939 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70d478e9 - End of configuration.
   [testng] [2024-11-17 04:01:56,403] [pool-1-thread-12] Initializing /data/viktorie/2Channels.tif: 
   [testng] 04:01:56,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 04:01:56,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:56,405 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-17_04-01-56.log]
   [testng] 04:01:56,405 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27323394 - End of configuration.
   [testng] [2024-11-17 04:01:57,624] [pool-1-thread-11] Initializing /data/viktorie/test/test_d.mtb: 
   [testng] 04:01:57,624 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 04:01:57,624 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:57,625 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-17_04-01-57.log]
   [testng] 04:01:57,625 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64e9cb50 - End of configuration.
   [testng] [2024-11-17 04:01:58,096] [pool-1-thread-10] Initializing /data/qa-17107/plain/Plain_d.mtb: 
   [testng] 04:01:58,096 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 04:01:58,096 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:58,097 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-17_04-01-58.log]
   [testng] 04:01:58,097 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f360f71 - End of configuration.
   [testng] [2024-11-17 04:01:58,685] [pool-1-thread-9] Initializing /data/colin/08-10-09/08-10-09_d.mtb: 
   [testng] 04:01:58,685 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 04:01:58,685 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:58,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-17_04-01-58.log]
   [testng] 04:01:58,686 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2eb01ba8 - End of configuration.
   [testng] [2024-11-17 04:02:02,564] [pool-1-thread-8] Initializing /data/qa-17107/MaterialsDemo/MaterialsDemo_d.mtb: 
   [testng] 04:02:02,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 04:02:02,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:02:02,565 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-17_04-02-02.log]
   [testng] 04:02:02,565 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9181412 - End of configuration.
   [testng] [2024-11-17 04:02:03,232] [pool-1-thread-7] Initializing /data/qa-17107/example2/example2_d.mtb: 
   [testng] 04:02:03,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 04:02:03,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:02:03,233 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-17_04-02-03.log]
   [testng] 04:02:03,234 |-INFO in ch.qos.logback.core.sift.SiftProcessor@719e3858 - End of configuration.
   [testng] [2024-11-17 04:02:03,832] [pool-1-thread-6] Initializing /data/clare/set_27_on_d.mtb: 
   [testng] 04:02:03,833 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 04:02:03,833 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:02:03,833 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-17_04-02-03.log]
   [testng] 04:02:03,834 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72f75ccd - End of configuration.
   [testng] [2024-11-17 04:02:04,814] [pool-1-thread-5] Initializing /data/viktorie/Structure.jpg: 
   [testng] 04:02:04,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 04:02:04,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:02:04,815 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-17_04-02-04.log]
   [testng] 04:02:04,815 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2516b030 - End of configuration.
   [testng] [2024-11-17 04:02:04,941] [pool-1-thread-4] Initializing /data/viktorie/090902/090902_d.mtb: 
   [testng] 04:02:04,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 04:02:04,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:02:04,942 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-17_04-02-04.log]
   [testng] 04:02:04,942 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64006215 - End of configuration.
   [testng] [2024-11-17 04:02:05,488] [pool-1-thread-3] Initializing /data/kees/Mariaelena_d.mtb: 
   [testng] 04:02:05,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 04:02:05,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:02:05,489 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-17_04-02-05.log]
   [testng] 04:02:05,489 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cbe9e86 - End of configuration.
   [testng] [2024-11-17 04:02:06,896] [pool-1-thread-2] Initializing /data/qa-6659/12-07-05/12-07-05_d.mtb: 
   [testng] 04:02:06,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 04:02:06,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:02:06,897 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-17_04-02-06.log]
   [testng] 04:02:06,897 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b34d2fe - End of configuration.
   [testng] [2024-11-17 04:02:13,144] [pool-1-thread-5] Initializing /data/colin/07-06-21/07-06-21_d.mtb: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 6 minutes 27 seconds
Finished: SUCCESS