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Started by upstream project "BIOFORMATS-test-repo" build number 259 originally caused by: Started by upstream project "Trigger" build number 283 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins14478848368937513219.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_40795_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:22:07,841 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:22:07,843 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:22:07,843 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:07,844 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:07,844 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:22:07,844 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:22:07,845 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:22:07,845 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:07,845 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:07,845 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:22:07,846 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:22:07,846 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:22:08,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:22:08,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:22:08,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:22:08,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:22:08,109 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:22:08,109 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:22:08,109 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:22:08,110 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:22:08,110 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:22:08,111 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:22:08,111 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 266 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-18 00:22:08,121] [main] java.version = 1.8.0_342 [testng] 00:22:08,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:22:08,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:08,178 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-18_00-22-08.log] [testng] 00:22:08,179 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-11-18 00:22:08,181] [main] testng.directory = /data [testng] [2024-11-18 00:22:08,181] [main] testng.configDirectory = /config [testng] [2024-11-18 00:22:08,193] [main] testng.multiplier = 1.0 [testng] [2024-11-18 00:22:08,194] [main] testng.in-memory = false [testng] [2024-11-18 00:22:08,194] [main] testng.allow-missing = false [testng] [2024-11-18 00:22:08,194] [main] user.language = fr [testng] [2024-11-18 00:22:08,194] [main] user.country = FR [testng] [2024-11-18 00:22:08,194] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-11-18 00:22:12,385] [main] ---------------------------------------- [testng] [2024-11-18 00:22:12,385] [main] Total files: 103 [testng] [2024-11-18 00:22:12,385] [main] Scan time: 4.191 s (40 ms/file) [testng] [2024-11-18 00:22:12,385] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-18 00:22:25,237] [pool-1-thread-1] Initializing /data/melissa/annotation-test.dm3: [testng] 00:22:25,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:22:25,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:25,240 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-18_00-22-25.log] [testng] 00:22:25,240 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e5378ee - End of configuration. [testng] [2024-11-18 00:22:25,294] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] 00:22:25,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:22:25,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:25,295 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-18_00-22-25.log] [testng] 00:22:25,295 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37e1d7ba - End of configuration. [testng] [2024-11-18 00:22:25,527] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] 00:22:25,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:22:25,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:25,528 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-18_00-22-25.log] [testng] 00:22:25,529 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b564f8b - End of configuration. [testng] [2024-11-18 00:22:25,570] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] 00:22:25,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:22:25,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:25,571 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-18_00-22-25.log] [testng] 00:22:25,571 |-INFO in ch.qos.logback.core.sift.SiftProcessor@119d6bca - End of configuration. [testng] [2024-11-18 00:22:25,839] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] 00:22:25,839 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:22:25,839 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:25,840 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-18_00-22-25.log] [testng] 00:22:25,840 |-INFO in ch.qos.logback.core.sift.SiftProcessor@708fdaf5 - End of configuration. [testng] [2024-11-18 00:22:25,883] [pool-1-thread-8] Initializing /data/jay/camtest1.dm3: [testng] 00:22:25,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:22:25,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:25,884 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-18_00-22-25.log] [testng] 00:22:25,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b0175fa - End of configuration. [testng] [2024-11-18 00:22:25,972] [pool-1-thread-7] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 00:22:25,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:22:25,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:25,973 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-18_00-22-25.log] [testng] 00:22:25,973 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e648bae - End of configuration. [testng] [2024-11-18 00:22:26,042] [pool-1-thread-6] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] 00:22:26,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:22:26,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:26,043 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-18_00-22-26.log] [testng] 00:22:26,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e314d56 - End of configuration. [testng] [2024-11-18 00:22:26,109] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] 00:22:26,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:22:26,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:26,110 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-18_00-22-26.log] [testng] 00:22:26,110 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6442952d - End of configuration. [testng] [2024-11-18 00:22:26,192] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] 00:22:26,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:22:26,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:26,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-18_00-22-26.log] [testng] 00:22:26,193 |-INFO in ch.qos.logback.core.sift.SiftProcessor@be735ce - End of configuration. [testng] [2024-11-18 00:22:26,332] [pool-1-thread-3] Initializing /data/qa-21761/example.dm4: [testng] 00:22:26,333 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:22:26,333 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:26,333 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-18_00-22-26.log] [testng] 00:22:26,334 |-INFO in ch.qos.logback.core.sift.SiftProcessor@298d15ea - End of configuration. [testng] [2024-11-18 00:22:26,388] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] 00:22:26,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:22:26,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:26,389 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-18_00-22-26.log] [testng] 00:22:26,389 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52c8ffb1 - End of configuration. [testng] [2024-11-18 00:22:30,650] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-11-18 00:22:31,496] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-11-18 00:22:31,616] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-11-18 00:22:32,188] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-11-18 00:22:33,185] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-11-18 00:22:33,712] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-11-18 00:22:34,592] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-11-18 00:22:35,563] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-11-18 00:22:35,707] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-11-18 00:22:36,431] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-11-18 00:22:36,857] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-11-18 00:22:37,959] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-11-18 00:22:38,728] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-11-18 00:22:38,874] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-11-18 00:22:39,600] [pool-1-thread-3] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-11-18 00:22:39,978] [pool-1-thread-8] Initializing /data/jay/dnasample1.dm3: [testng] [2024-11-18 00:22:40,746] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-11-18 00:22:40,926] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-11-18 00:22:41,246] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-11-18 00:22:41,607] [pool-1-thread-6] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-11-18 00:22:42,960] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-11-18 00:22:44,135] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-11-18 00:22:44,365] [pool-1-thread-3] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-11-18 00:22:45,160] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-11-18 00:22:45,329] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-11-18 00:22:45,888] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-11-18 00:22:47,707] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-11-18 00:22:47,920] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-11-18 00:22:48,190] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-11-18 00:22:49,112] [pool-1-thread-4] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-11-18 00:22:49,726] [pool-1-thread-12] Initializing /data/ofra/lowloss.dm3: [testng] [2024-11-18 00:22:50,369] [pool-1-thread-9] Initializing /data/jay/smallerfile.dm3: [testng] [2024-11-18 00:22:51,235] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-11-18 00:22:52,977] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-11-18 00:22:53,145] [pool-1-thread-7] Initializing /data/melissa/annotation-test.tif: [testng] [2024-11-18 00:22:54,283] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-11-18 00:22:54,455] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-11-18 00:22:54,663] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-11-18 00:22:56,050] [pool-1-thread-9] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-11-18 00:22:57,202] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-11-18 00:22:58,599] [pool-1-thread-6] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-11-18 00:22:59,208] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-11-18 00:22:59,929] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-11-18 00:23:00,957] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-11-18 00:23:01,339] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-11-18 00:23:02,397] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-11-18 00:23:02,742] [pool-1-thread-10] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-11-18 00:23:03,067] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-11-18 00:23:04,559] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-11-18 00:23:04,904] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-11-18 00:23:06,050] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-11-18 00:23:06,425] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-11-18 00:23:07,331] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-11-18 00:23:07,544] [pool-1-thread-12] Initializing /data/jay/DMtest2.dm3: [testng] [2024-11-18 00:23:07,696] [pool-1-thread-10] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-11-18 00:23:09,633] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-11-18 00:23:09,803] [pool-1-thread-9] Initializing /data/samples/test-tiles.dm3: [testng] [2024-11-18 00:23:10,092] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-11-18 00:23:10,510] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-11-18 00:23:12,076] [pool-1-thread-6] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-11-18 00:23:12,236] [pool-1-thread-8] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-11-18 00:23:14,177] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-11-18 00:23:15,306] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-11-18 00:23:16,081] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-11-18 00:23:16,361] [pool-1-thread-12] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-11-18 00:23:18,278] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-11-18 00:23:19,754] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-11-18 00:23:19,949] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-11-18 00:23:20,497] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-11-18 00:23:20,674] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-11-18 00:23:22,734] [pool-1-thread-8] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-11-18 00:23:23,708] [pool-1-thread-2] Initializing /data/jay/dnasample.tif: [testng] [2024-11-18 00:23:25,034] [pool-1-thread-12] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-11-18 00:23:25,575] [pool-1-thread-9] Initializing /data/jay/DMtest.dm3: [testng] [2024-11-18 00:23:25,724] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-11-18 00:23:27,179] [pool-1-thread-5] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-11-18 00:23:27,399] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-11-18 00:23:29,294] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-11-18 00:23:30,473] [pool-1-thread-8] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-11-18 00:23:31,387] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-11-18 00:23:32,135] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-11-18 00:23:32,642] [pool-1-thread-7] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-11-18 00:23:33,034] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-11-18 00:23:33,608] [pool-1-thread-12] Initializing /data/qa-7642/8.dm4: [testng] [2024-11-18 00:23:33,766] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-11-18 00:23:34,164] [pool-1-thread-5] Initializing /data/jay/biosamplefullframetif.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 39 seconds Finished: SUCCESS