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Started by upstream project "BIOFORMATS-test-repo" build number 259 originally caused by: Started by upstream project "Trigger" build number 283 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins15040609214510771849.sh + '[' fei = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_40820_merge_ci -v /uod/idr/repos/curated/fei:/data -v /uod/idr-scratch/merge-ci/curated/fei:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:33:29,753 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:33:29,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:33:29,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:33:29,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:33:29,836 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:33:29,836 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:33:29,836 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:33:29,836 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:33:29,837 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1139b2f3 - End of configuration. [testng] 00:33:29,837 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@3f197a46 - Registering current configuration as safe fallback point [testng] 00:33:29,838 |-INFO in ch.qos.logback.classic.util.ContextInitializer@636be97c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 559 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-18 00:33:29,848] [main] java.version = 1.8.0_342 [testng] 00:33:29,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:33:29,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:29,989 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-18_00-33-29.log] [testng] 00:33:29,990 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-11-18 00:33:30,011] [main] testng.directory = /data [testng] [2024-11-18 00:33:30,012] [main] testng.configDirectory = /config [testng] [2024-11-18 00:33:30,043] [main] testng.multiplier = 1.0 [testng] [2024-11-18 00:33:30,043] [main] testng.in-memory = false [testng] [2024-11-18 00:33:30,044] [main] testng.allow-missing = false [testng] [2024-11-18 00:33:30,044] [main] user.language = fr [testng] [2024-11-18 00:33:30,044] [main] user.country = FR [testng] [2024-11-18 00:33:30,044] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-11-18 00:33:32,701] [main] ---------------------------------------- [testng] [2024-11-18 00:33:32,701] [main] Total files: 21 [testng] [2024-11-18 00:33:32,701] [main] Scan time: 2.657 s (126 ms/file) [testng] [2024-11-18 00:33:32,701] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 18 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-18 00:33:37,830] [pool-1-thread-1] Initializing /data/antoine/Tile_001-002-000_0-000.tif: [testng] 00:33:37,831 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:33:37,831 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:37,831 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-18_00-33-37.log] [testng] 00:33:37,832 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e47f1dc - End of configuration. [testng] [2024-11-18 00:33:37,994] [pool-1-thread-12] Initializing /data/venu/VENU_Eight.TIF: [testng] 00:33:37,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:33:37,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:37,996 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-18_00-33-37.log] [testng] 00:33:37,996 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e48e01a - End of configuration. [testng] [2024-11-18 00:33:38,202] [pool-1-thread-11] Initializing /data/venu/VENU01.IMG: [testng] 00:33:38,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:33:38,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:38,203 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-18_00-33-38.log] [testng] 00:33:38,203 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fb74b9b - End of configuration. [testng] [2024-11-18 00:33:38,267] [pool-1-thread-10] Initializing /data/venu/VENU_Six.TIF: [testng] 00:33:38,267 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:33:38,267 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:38,268 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-18_00-33-38.log] [testng] 00:33:38,268 |-INFO in ch.qos.logback.core.sift.SiftProcessor@763b837 - End of configuration. [testng] [2024-11-18 00:33:38,436] [pool-1-thread-9] Initializing /data/venu/VENU_Four.TIF: [testng] 00:33:38,437 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:33:38,437 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:38,438 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-18_00-33-38.log] [testng] 00:33:38,438 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f7cbbb6 - End of configuration. [testng] [2024-11-18 00:33:38,631] [pool-1-thread-8] Initializing /data/venu/VENU01.TIF: [testng] 00:33:38,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:33:38,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:38,631 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-18_00-33-38.log] [testng] 00:33:38,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@414e1750 - End of configuration. [testng] [2024-11-18 00:33:38,852] [pool-1-thread-7] Initializing /data/venu/VENU_Five.TIF: [testng] 00:33:38,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:33:38,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:38,853 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-18_00-33-38.log] [testng] 00:33:38,854 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79548bee - End of configuration. [testng] [2024-11-18 00:33:39,039] [pool-1-thread-6] Initializing /data/venu/VENU_Seven.TIF: [testng] 00:33:39,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:33:39,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:39,040 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-18_00-33-39.log] [testng] 00:33:39,040 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a86ccb9 - End of configuration. [testng] [2024-11-18 00:33:39,203] [pool-1-thread-5] Initializing /data/steffen/Batman_008.tif: [testng] 00:33:39,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:33:39,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:39,205 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-18_00-33-39.log] [testng] 00:33:39,205 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18d7faff - End of configuration. [testng] [2024-11-18 00:33:39,404] [pool-1-thread-4] Initializing /data/qa-4264/08.51.17 CCD Acquire-Acquire CCD Image Display-Acquire CCD -0.tif: [testng] 00:33:39,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:33:39,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:39,405 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-18_00-33-39.log] [testng] 00:33:39,406 |-INFO in ch.qos.logback.core.sift.SiftProcessor@726930d2 - End of configuration. [testng] [2024-11-18 00:33:39,605] [pool-1-thread-3] Initializing /data/qa-11061/Tile_020-009-000_0.tif: [testng] 00:33:39,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:33:39,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:39,606 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-18_00-33-39.log] [testng] 00:33:39,606 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f76a7a - End of configuration. [testng] [2024-11-18 00:33:39,823] [pool-1-thread-2] Initializing /data/venu/VENU02.TIF: [testng] 00:33:39,823 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:33:39,823 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:39,824 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-18_00-33-39.log] [testng] 00:33:39,824 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41d9c939 - End of configuration. [testng] [2024-11-18 00:33:42,832] [pool-1-thread-11] Initializing /data/venu/VENU03.IMG: [testng] [2024-11-18 00:33:43,862] [pool-1-thread-10] Initializing /data/peter/ZC_PTCS_ED_1000x_002.tif: [testng] [2024-11-18 00:33:44,084] [pool-1-thread-12] Initializing /data/venu/VENU03.TIF: [testng] [2024-11-18 00:33:44,313] [pool-1-thread-7] Initializing /data/qa-10514/TITAN_FEI_TIFF_Test_Image.tif: [testng] [2024-11-18 00:33:44,492] [pool-1-thread-6] Initializing /data/venu/VENU02.IMG: [testng] [2024-11-18 00:33:44,556] [pool-1-thread-5] Initializing /data/venu/VENU.TIF: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 954, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 22 seconds Finished: SUCCESS