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Started by upstream project "BIOFORMATS-test-repo" build number 261 originally caused by: Started by upstream project "Trigger" build number 285 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins1535701697778160206.sh + '[' ome-xml = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_41256_merge_ci -v /uod/idr/repos/curated/ome-xml:/data -v /uod/idr-scratch/merge-ci/curated/ome-xml:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 04:29:19,394 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 04:29:19,395 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 04:29:19,395 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:29:19,396 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:29:19,396 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:29:19,396 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:29:19,397 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:29:19,397 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:29:19,397 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:29:19,398 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:29:19,398 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:29:19,398 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:29:19,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:29:19,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:29:19,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:29:19,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:29:19,575 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:29:19,575 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:29:19,575 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:29:19,576 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:29:19,576 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 04:29:19,577 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 04:29:19,577 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 180 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-20 04:29:19,585] [main] java.version = 17.0.2 [testng] 04:29:19,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:29:19,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:29:19,626 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-20_04-29-19.log] [testng] 04:29:19,627 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-11-20 04:29:19,629] [main] testng.directory = /data [testng] [2024-11-20 04:29:19,629] [main] testng.configDirectory = /config [testng] [2024-11-20 04:29:19,637] [main] testng.multiplier = 1.0 [testng] [2024-11-20 04:29:19,638] [main] testng.in-memory = false [testng] [2024-11-20 04:29:19,638] [main] testng.allow-missing = false [testng] [2024-11-20 04:29:19,638] [main] user.language = en [testng] [2024-11-20 04:29:19,638] [main] user.country = ${user.country} [testng] [2024-11-20 04:29:19,638] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-20 04:29:25,294] [main] ---------------------------------------- [testng] [2024-11-20 04:29:25,294] [main] Total files: 203 [testng] [2024-11-20 04:29:25,294] [main] Scan time: 5.655 s (27 ms/file) [testng] [2024-11-20 04:29:25,294] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 202 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-20 04:31:36,121] [pool-1-thread-1] Initializing /data/public/2011-06/z-series-time-series.ome.xml: [testng] 04:31:36,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:31:36,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:36,123 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-20_04-31-36.log] [testng] 04:31:36,124 |-INFO in ch.qos.logback.core.sift.SiftProcessor@822661a - End of configuration. [testng] [2024-11-20 04:31:36,568] [pool-1-thread-12] Initializing /data/public/2011-06/time-series.ome.xml: [testng] 04:31:36,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:31:36,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:36,569 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-20_04-31-36.log] [testng] 04:31:36,569 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e2726a1 - End of configuration. [testng] [2024-11-20 04:31:36,988] [pool-1-thread-11] Initializing /data/public/2008-09/instrument.ome.xml: [testng] 04:31:36,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:31:36,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:36,989 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-20_04-31-36.log] [testng] 04:31:36,990 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2dd3d25e - End of configuration. [testng] [2024-11-20 04:31:37,475] [pool-1-thread-10] Initializing /data/public/2016-06/timestampannotation.ome.xml: [testng] 04:31:37,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:31:37,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:37,476 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-20_04-31-37.log] [testng] 04:31:37,477 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23c6a4a8 - End of configuration. [testng] [2024-11-20 04:31:37,933] [pool-1-thread-9] Initializing /data/samples/sdub.ome: [testng] 04:31:37,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:31:37,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:37,934 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-20_04-31-37.log] [testng] 04:31:37,934 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cee6d65 - End of configuration. [testng] [2024-11-20 04:31:38,521] [pool-1-thread-8] Initializing /data/public/2010-04/multi-channel.ome.xml: [testng] 04:31:38,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:31:38,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:38,522 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-20_04-31-38.log] [testng] 04:31:38,522 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67ff8919 - End of configuration. [testng] [2024-11-20 04:31:38,923] [pool-1-thread-7] Initializing /data/public/2015-01/spim.ome.xml: [testng] 04:31:38,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:31:38,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:38,924 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-20_04-31-38.log] [testng] 04:31:38,925 |-INFO in ch.qos.logback.core.sift.SiftProcessor@283fd3bb - End of configuration. [testng] [2024-11-20 04:31:39,373] [pool-1-thread-6] Initializing /data/public/2012-06/time-series.ome.xml: [testng] 04:31:39,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:31:39,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:39,374 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-20_04-31-39.log] [testng] 04:31:39,374 |-INFO in ch.qos.logback.core.sift.SiftProcessor@646fdf9b - End of configuration. [testng] [2024-11-20 04:31:39,800] [pool-1-thread-5] Initializing /data/public/2008-09/multi-pixel-aquired.ome.xml: [testng] 04:31:39,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:31:39,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:39,801 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-20_04-31-39.log] [testng] 04:31:39,801 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18ff7fd6 - End of configuration. [testng] [2024-11-20 04:31:40,230] [pool-1-thread-4] Initializing /data/public/2016-06/minimum-specification.ome.xml: [testng] 04:31:40,230 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:31:40,230 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:40,230 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-20_04-31-40.log] [testng] 04:31:40,231 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20d2e350 - End of configuration. [testng] [2024-11-20 04:31:40,621] [pool-1-thread-3] Initializing /data/public/2012-06/z-series.ome.xml: [testng] 04:31:40,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:31:40,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:40,622 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-20_04-31-40.log] [testng] 04:31:40,622 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c7120bd - End of configuration. [testng] [2024-11-20 04:31:41,042] [pool-1-thread-2] Initializing /data/public/2015-01/multi-channel-time-series.ome.xml: [testng] 04:31:41,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:31:41,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:31:41,042 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-20_04-31-41.log] [testng] 04:31:41,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41afb217 - End of configuration. [testng] [2024-11-20 04:31:46,920] [pool-1-thread-4] Initializing /data/public/2015-01/single-image.ome.xml: [testng] [2024-11-20 04:31:47,376] [pool-1-thread-3] Initializing /data/public/2016-06/z-series-time-series.ome.xml: [testng] [2024-11-20 04:31:47,813] [pool-1-thread-6] Initializing /data/public/2015-01/ROI.ome.xml: [testng] [2024-11-20 04:31:48,236] [pool-1-thread-2] Initializing /data/public/2011-06/multi-channel-z-series.ome.xml: [testng] [2024-11-20 04:31:48,656] [pool-1-thread-12] Initializing /data/public/2016-06/commentannotation.ome.xml: [testng] [2024-11-20 04:31:49,064] [pool-1-thread-1] Initializing /data/public/2013-06/metadata-only.ome.xml: [testng] [2024-11-20 04:31:49,512] [pool-1-thread-8] Initializing /data/public/2010-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-20 04:31:49,977] [pool-1-thread-5] Initializing /data/samples/Sample-2003_FC.ome: [testng] [2024-11-20 04:31:50,476] [pool-1-thread-11] Initializing /data/public/2015-01/minimum-specification.ome.xml: [testng] [2024-11-20 04:31:50,924] [pool-1-thread-10] Initializing /data/public/2011-06/ROI.ome.xml: [testng] [2024-11-20 04:31:51,401] [pool-1-thread-9] Initializing /data/public/2016-06/instrument.ome.xml: [testng] [2024-11-20 04:31:52,021] [pool-1-thread-7] Initializing /data/public/2016-06/xmlannotation-multi-value.ome.xml: [testng] [2024-11-20 04:31:56,094] [pool-1-thread-11] Initializing /data/public/2010-04/multi-channel-z-series.ome.xml: [testng] [2024-11-20 04:31:56,539] [pool-1-thread-4] Initializing /data/curtis/all-black.tif: [testng] [2024-11-20 04:31:58,944] [pool-1-thread-6] Initializing /data/public/2011-06/single-image.ome.xml: [testng] [2024-11-20 04:31:59,379] [pool-1-thread-1] Initializing /data/public/2012-06/filter.ome.xml: [testng] [2024-11-20 04:31:59,833] [pool-1-thread-12] Initializing /data/public/2012-06/instrument.ome.xml: [testng] [2024-11-20 04:32:00,259] [pool-1-thread-2] Initializing /data/public/2011-06/z-series.ome.xml: [testng] [2024-11-20 04:32:00,697] [pool-1-thread-10] Initializing /data/public/2011-06/filter.ome.xml: [testng] [2024-11-20 04:32:01,134] [pool-1-thread-3] Initializing /data/public/2009-09/multi-channel.ome.xml: [testng] [2024-11-20 04:32:01,566] [pool-1-thread-5] Initializing /data/public/2010-04/ROI.ome.xml: [testng] [2024-11-20 04:32:02,023] [pool-1-thread-8] Initializing /data/public/2009-09/instrument.ome.xml: [testng] [2024-11-20 04:32:02,963] [pool-1-thread-7] Initializing /data/public/2015-01/z-series.ome.xml: [testng] [2024-11-20 04:32:03,590] [pool-1-thread-9] Initializing /data/public/2011-06/xmlannotation-svg.ome.xml: [testng] [2024-11-20 04:32:07,244] [pool-1-thread-2] Initializing /data/public/2013-06/multi-channel-time-series.ome.xml: [testng] [2024-11-20 04:32:07,691] [pool-1-thread-10] Initializing /data/public/2009-09/z-series-time-series.ome.xml: [testng] [2024-11-20 04:32:08,129] [pool-1-thread-6] Initializing /data/public/2008-09/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-20 04:32:08,565] [pool-1-thread-11] Initializing /data/public/2015-01/instrument.ome.xml: [testng] [2024-11-20 04:32:08,964] [pool-1-thread-1] Initializing /data/public/2012-06/transformations-downgrade.ome.xml: [testng] [2024-11-20 04:32:09,512] [pool-1-thread-12] Initializing /data/public/2011-06/spim.ome.xml: [testng] [2024-11-20 04:32:09,984] [pool-1-thread-3] Initializing /data/public/2016-06/instrument-units-alternate.ome.xml: [testng] [2024-11-20 04:32:10,442] [pool-1-thread-5] Initializing /data/public/2013-06/filter.ome.xml: [testng] [2024-11-20 04:32:10,870] [pool-1-thread-8] Initializing /data/public/2012-06/z-series-time-series.ome.xml: [testng] [2024-11-20 04:32:12,745] [pool-1-thread-7] Initializing /data/public/2011-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-20 04:32:13,398] [pool-1-thread-9] Initializing /data/public/2010-04/z-series.ome.xml: [testng] [2024-11-20 04:32:16,356] [pool-1-thread-2] Initializing /data/samples/Sample-2007_06.ome: [testng] [2024-11-20 04:32:16,863] [pool-1-thread-8] Initializing /data/public/2011-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-20 04:32:17,508] [pool-1-thread-3] Initializing /data/public/2010-06/spim.ome.xml: [testng] [2024-11-20 04:32:17,972] [pool-1-thread-5] Initializing /data/public/2015-01/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-20 04:32:18,426] [pool-1-thread-12] Initializing /data/public/2008-09/multi-channel-time-series.ome.xml: [testng] [2024-11-20 04:32:18,873] [pool-1-thread-10] Initializing /data/public/2010-06/ROI.ome.xml: [testng] [2024-11-20 04:32:19,317] [pool-1-thread-1] Initializing /data/public/2010-06/instrument.ome.xml: [testng] [2024-11-20 04:32:19,734] [pool-1-thread-6] Initializing /data/public/2009-09/single-image.ome.xml: [testng] [2024-11-20 04:32:20,149] [pool-1-thread-11] Initializing /data/curtis/black6-7.ome: [testng] [2024-11-20 04:32:22,776] [pool-1-thread-9] Initializing /data/public/2013-06/timestampannotation-posix-only.ome.xml: [testng] [2024-11-20 04:32:23,274] [pool-1-thread-4] Initializing /data/public/2008-09/time-series.ome.xml: [testng] [2024-11-20 04:32:23,796] [pool-1-thread-7] Initializing /data/public/2009-09/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-20 04:32:26,271] [pool-1-thread-2] Initializing /data/public/2011-06/transformations-upgrade.ome.xml: [testng] [2024-11-20 04:32:26,810] [pool-1-thread-12] Initializing /data/public/2016-06/xmlannotation-svg.ome.xml: [testng] [2024-11-20 04:32:27,300] [pool-1-thread-3] Initializing /data/public/2011-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-20 04:32:27,769] [pool-1-thread-6] Initializing /data/public/2015-01/instrument-units-default.ome.xml: [testng] [2024-11-20 04:32:28,239] [pool-1-thread-1] Initializing /data/public/2012-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-20 04:32:28,694] [pool-1-thread-10] Initializing /data/public/2016-06/single-image.ome.xml: [testng] [2024-11-20 04:32:29,134] [pool-1-thread-8] Initializing /data/public/2013-06/xmlannotation-svg.ome.xml: [testng] [2024-11-20 04:32:29,542] [pool-1-thread-5] Initializing /data/public/2013-06/multi-channel.ome.xml: [testng] [2024-11-20 04:32:29,977] [pool-1-thread-11] Initializing /data/johannes/20100625_W3_Ppac_8.ome: [testng] [2024-11-20 04:32:30,562] [pool-1-thread-9] Initializing /data/public/2015-01/z-series-time-series.ome.xml: [testng] [2024-11-20 04:32:32,856] [pool-1-thread-4] Initializing /data/public/2010-06/filter.ome.xml: [testng] [2024-11-20 04:32:33,352] [pool-1-thread-7] Initializing /data/public/2015-01/transformations-upgrade.ome.xml: [testng] [2024-11-20 04:32:33,905] [pool-1-thread-2] Initializing /data/public/2012-06/no-date.ome.xml: [testng] [2024-11-20 04:32:35,764] [pool-1-thread-10] Initializing /data/public/2016-06/transformations-upgrade.ome.xml: [testng] [2024-11-20 04:32:36,244] [pool-1-thread-8] Initializing /data/public/2010-06/z-series-time-series.ome.xml: [testng] [2024-11-20 04:32:36,700] [pool-1-thread-5] Initializing /data/public/2009-09/ROI.ome.xml: [testng] [2024-11-20 04:32:37,120] [pool-1-thread-12] Initializing /data/samples/Sample-2003-custom-ST.ome: [testng] [2024-11-20 04:32:37,563] [pool-1-thread-3] Initializing /data/mario/Hoechst_ND - n000000.tif: [testng] [2024-11-20 04:32:39,734] [pool-1-thread-1] Initializing /data/mario/Hoechst_ND - n000000.ome: [testng] [2024-11-20 04:32:40,228] [pool-1-thread-6] Initializing /data/public/2009-09/metadata-only.ome.xml: [testng] [2024-11-20 04:32:40,666] [pool-1-thread-11] Initializing /data/sandeep/synth_rbc.ome: [testng] [2024-11-20 04:32:41,265] [pool-1-thread-9] Initializing /data/public/2010-04/instrument.ome.xml: [testng] [2024-11-20 04:32:43,093] [pool-1-thread-4] Initializing /data/public/2011-06/instrument.ome.xml: [testng] [2024-11-20 04:32:44,621] [pool-1-thread-2] Initializing /data/public/2015-01/transformations-downgrade.ome.xml: [testng] [2024-11-20 04:32:45,181] [pool-1-thread-7] Initializing /data/public/2012-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-20 04:32:46,693] [pool-1-thread-6] Initializing /data/public/2015-01/commentannotation.ome.xml: [testng] [2024-11-20 04:32:47,142] [pool-1-thread-9] Initializing /data/public/2013-06/timestampannotation.ome.xml: [testng] [2024-11-20 04:32:47,619] [pool-1-thread-5] Initializing /data/public/2013-06/xmlannotation-body-space.ome.xml: [testng] [2024-11-20 04:32:48,051] [pool-1-thread-8] Initializing /data/public/2016-06/mapannotation.ome.xml: [testng] [2024-11-20 04:32:48,508] [pool-1-thread-12] Initializing /data/public/2016-06/folders-larger-taxonomy.ome.xml: [testng] [2024-11-20 04:32:49,102] [pool-1-thread-10] Initializing /data/public/2013-06/xmlannotation-multi-value.ome.xml: [testng] [2024-11-20 04:32:49,615] [pool-1-thread-11] Initializing /data/public/2016-06/transformations-downgrade.ome.xml: [testng] [2024-11-20 04:32:50,497] [pool-1-thread-4] Initializing /data/public/2010-06/no-date.ome.xml: [testng] [2024-11-20 04:32:51,588] [pool-1-thread-1] Initializing /data/public/2013-06/transformations-downgrade.ome.xml: [testng] [2024-11-20 04:32:52,839] [pool-1-thread-2] Initializing /data/public/2013-06/single-image.ome.xml: [testng] [2024-11-20 04:32:53,725] [pool-1-thread-6] Initializing /data/public/2010-04/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-20 04:32:54,213] [pool-1-thread-9] Initializing /data/public/2010-06/multi-channel-time-series.ome.xml: [testng] [2024-11-20 04:32:54,663] [pool-1-thread-7] Initializing /data/public/2012-06/multi-channel-time-series.ome.xml: [testng] [2024-11-20 04:32:55,081] [pool-1-thread-5] Initializing /data/public/2013-06/z-series.ome.xml: [testng] [2024-11-20 04:32:55,526] [pool-1-thread-8] Initializing /data/public/2015-01/filter.ome.xml: [testng] [2024-11-20 04:32:56,714] [pool-1-thread-10] Initializing /data/public/2010-06/z-series.ome.xml: [testng] [2024-11-20 04:32:57,306] [pool-1-thread-11] Initializing /data/public/2016-06/filter.ome.xml: [testng] [2024-11-20 04:32:58,345] [pool-1-thread-12] Initializing /data/curtis/black6-7.tif: [testng] [2024-11-20 04:33:01,734] [pool-1-thread-4] Initializing /data/public/2013-06/instrument.ome.xml: [testng] [2024-11-20 04:33:02,688] [pool-1-thread-2] Initializing /data/public/2016-06/ROI.ome.xml: [testng] [2024-11-20 04:33:03,276] [pool-1-thread-1] Initializing /data/public/2009-09/multi-channel-time-series.ome.xml: [testng] [2024-11-20 04:33:04,222] [pool-1-thread-5] Initializing /data/public/2015-01/xmlannotation-body-space.ome.xml: [testng] [2024-11-20 04:33:04,810] [pool-1-thread-8] Initializing /data/public/2015-01/xmlannotation-multi-value.ome.xml: [testng] [2024-11-20 04:33:05,324] [pool-1-thread-7] Initializing /data/public/2016-06/no-date.ome.xml: [testng] [2024-11-20 04:33:05,769] [pool-1-thread-6] Initializing /data/public/2010-06/single-image.ome.xml: [testng] [2024-11-20 04:33:06,235] [pool-1-thread-9] Initializing /data/public/2008-09/z-series.ome.xml: [testng] [2024-11-20 04:33:06,717] [pool-1-thread-3] Initializing /data/public/2015-01/no-date.ome.xml: [testng] [2024-11-20 04:33:07,135] [pool-1-thread-11] Initializing /data/curtis/black0.tif: [testng] [2024-11-20 04:33:09,681] [pool-1-thread-10] Initializing /data/samples/test.OME: [testng] [2024-11-20 04:33:12,622] [pool-1-thread-2] Initializing /data/public/2010-06/time-series.ome.xml: [testng] [2024-11-20 04:33:13,090] [pool-1-thread-4] Initializing /data/public/2012-06/spim.ome.xml: [testng] [2024-11-20 04:33:13,612] [pool-1-thread-1] Initializing /data/public/2016-06/folders-simple-taxonomy.ome.xml: [testng] [2024-11-20 04:33:15,708] [pool-1-thread-10] Initializing /data/public/2013-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-20 04:33:16,408] [pool-1-thread-9] Initializing /data/public/2010-04/single-image.ome.xml: [testng] [2024-11-20 04:33:16,932] [pool-1-thread-3] Initializing /data/public/2012-06/ROI.ome.xml: [testng] [2024-11-20 04:33:17,373] [pool-1-thread-7] Initializing /data/public/2013-06/time-series.ome.xml: [testng] [2024-11-20 04:33:17,796] [pool-1-thread-6] Initializing /data/public/2016-06/time-series.ome.xml: [testng] [2024-11-20 04:33:18,255] [pool-1-thread-5] Initializing /data/public/2010-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-20 04:33:18,716] [pool-1-thread-8] Initializing /data/public/2013-06/commentannotation.ome.xml: [testng] [2024-11-20 04:33:21,369] [pool-1-thread-2] Initializing /data/public/2016-06/spim.ome.xml: [testng] [2024-11-20 04:33:21,962] [pool-1-thread-4] Initializing /data/public/2011-06/no-date.ome.xml: [testng] [2024-11-20 04:33:22,646] [pool-1-thread-1] Initializing /data/public/2010-06/multi-channel.ome.xml: [testng] [2024-11-20 04:33:23,221] [pool-1-thread-10] Initializing /data/public/2010-06/multi-channel-z-series.ome.xml: [testng] [2024-11-20 04:33:24,234] [pool-1-thread-12] Initializing /data/samples/testImportPlateMultiplePlateAcquisitions1508.ome: [testng] [2024-11-20 04:33:26,057] [pool-1-thread-6] Initializing /data/public/2012-06/metadata-only.ome.xml: [testng] [2024-11-20 04:33:26,540] [pool-1-thread-3] Initializing /data/public/2015-01/mapannotation.ome.xml: [testng] [2024-11-20 04:33:27,038] [pool-1-thread-9] Initializing /data/samples/Sample-2008_02.ome: [testng] [2024-11-20 04:33:27,547] [pool-1-thread-8] Initializing /data/public/2015-01/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-20 04:33:28,014] [pool-1-thread-7] Initializing /data/public/2015-01/timestampannotation.ome.xml: [testng] [2024-11-20 04:33:28,452] [pool-1-thread-5] Initializing /data/public/2012-06/single-image.ome.xml: [testng] [2024-11-20 04:33:28,895] [pool-1-thread-11] Initializing /data/public/2013-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-20 04:33:29,900] [pool-1-thread-2] Initializing /data/public/2010-04/z-series-time-series.ome.xml: [testng] [2024-11-20 04:33:30,909] [pool-1-thread-4] Initializing /data/public/2012-06/multi-channel.ome.xml: [testng] [2024-11-20 04:33:31,808] [pool-1-thread-10] Initializing /data/public/2009-09/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-20 04:33:32,302] [pool-1-thread-1] Initializing /data/public/2008-09/z-series-time-series.ome.xml: [testng] [2024-11-20 04:33:34,795] [pool-1-thread-9] Initializing /data/public/2012-06/tagannotation.ome.xml: [testng] [2024-11-20 04:33:35,361] [pool-1-thread-8] Initializing /data/public/2010-04/multi-channel-time-series.ome.xml: [testng] [2024-11-20 04:33:35,942] [pool-1-thread-12] Initializing /data/melissa/large-xml-test.ome: [testng] [2024-11-20 04:33:45,990] [pool-1-thread-5] Initializing /data/curtis/all-black.ome: [testng] [2024-11-20 04:33:46,444] [pool-1-thread-6] Initializing /data/public/2008-09/single-image.ome.xml: [testng] [2024-11-20 04:33:46,895] [pool-1-thread-3] Initializing /data/public/2008-09/multi-channel-z-series.ome.xml: [testng] [2024-11-20 04:33:47,342] [pool-1-thread-11] Initializing /data/public/2015-01/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-20 04:33:47,796] [pool-1-thread-7] Initializing /data/curtis/min-sample-2008-02.ome: [testng] [2024-11-20 04:33:48,237] [pool-1-thread-2] Initializing /data/curtis/black0.ome: [testng] [2024-11-20 04:33:48,822] [pool-1-thread-4] Initializing /data/public/2011-06/multi-channel.ome.xml: [testng] [2024-11-20 04:33:51,579] [pool-1-thread-1] Initializing /data/public/2013-06/ROI.ome.xml: [testng] [2024-11-20 04:33:52,174] [pool-1-thread-9] Initializing /data/public/2013-06/tagannotation.ome.xml: [testng] [2024-11-20 04:33:52,979] [pool-1-thread-10] Initializing /data/public/2013-06/z-series-time-series.ome.xml: [testng] [2024-11-20 04:33:55,231] [pool-1-thread-6] Initializing /data/public/2015-01/multi-channel-z-series.ome.xml: [testng] [2024-11-20 04:33:55,721] [pool-1-thread-3] Initializing /data/public/2015-01/xmlannotation-svg.ome.xml: [testng] [2024-11-20 04:33:56,239] [pool-1-thread-7] Initializing /data/public/2010-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-20 04:33:56,759] [pool-1-thread-5] Initializing /data/public/2012-06/multi-channel-z-series.ome.xml: [testng] [2024-11-20 04:33:57,244] [pool-1-thread-11] Initializing /data/public/2016-06/hcs.ome.xml: [testng] [2024-11-20 04:33:57,693] [pool-1-thread-4] Initializing /data/public/2015-01/instrument-units-alternate.ome.xml: [testng] [2024-11-20 04:33:58,161] [pool-1-thread-2] Initializing /data/public/2015-01/time-series.ome.xml: [testng] [2024-11-20 04:33:58,617] [pool-1-thread-8] Initializing /data/public/2013-06/multi-channel-z-series.ome.xml: [testng] [2024-11-20 04:34:00,495] [pool-1-thread-1] Initializing /data/samples/TAABA.ome: [testng] [2024-11-20 04:34:02,682] [pool-1-thread-9] Initializing /data/public/2013-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-20 04:34:03,264] [pool-1-thread-10] Initializing /data/public/2008-09/multi-channel.ome.xml: [testng] [2024-11-20 04:34:05,157] [pool-1-thread-8] Initializing /data/public/2015-01/hcs.ome.xml: [testng] [2024-11-20 04:34:05,661] [pool-1-thread-5] Initializing /data/public/2012-06/xmlannotation-svg.ome.xml: [testng] [2024-11-20 04:34:06,243] [pool-1-thread-6] Initializing /data/public/2016-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-20 04:34:06,700] [pool-1-thread-2] Initializing /data/public/2010-04/time-series.ome.xml: [testng] [2024-11-20 04:34:07,135] [pool-1-thread-3] Initializing /data/public/2016-06/z-series.ome.xml: [testng] [2024-11-20 04:34:07,568] [pool-1-thread-4] Initializing /data/public/2009-09/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-20 04:34:08,032] [pool-1-thread-11] Initializing /data/public/2015-01/multi-channel.ome.xml: [testng] [2024-11-20 04:34:08,475] [pool-1-thread-7] Initializing /data/public/2013-06/transformations-upgrade.ome.xml: [testng] [2024-11-20 04:34:11,472] [pool-1-thread-10] Initializing /data/public/2016-06/instrument-units-default.ome.xml: [testng] [2024-11-20 04:34:11,961] [pool-1-thread-9] Initializing /data/public/2009-09/z-series.ome.xml: [testng] [2024-11-20 04:34:13,834] [pool-1-thread-1] Initializing /data/public/2010-04/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-20 04:34:14,726] [pool-1-thread-8] Initializing /data/public/2010-06/xmlannotation-svg.ome.xml: [testng] [2024-11-20 04:34:15,212] [pool-1-thread-4] Initializing /data/public/2013-06/no-date.ome.xml: [testng] [2024-11-20 04:34:15,670] [pool-1-thread-7] Initializing /data/public/2010-04/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-20 04:34:16,132] [pool-1-thread-3] Initializing /data/public/2009-09/multi-channel-z-series.ome.xml: [testng] [2024-11-20 04:34:16,593] [pool-1-thread-5] Initializing /data/public/2016-06/xmlannotation-body-space.ome.xml: [testng] [2024-11-20 04:34:17,040] [pool-1-thread-2] Initializing /data/public/2016-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-20 04:34:17,514] [pool-1-thread-11] Initializing /data/public/2008-09/multi-pixel-default.ome.xml: [testng] [2024-11-20 04:34:17,964] [pool-1-thread-6] Initializing /data/public/2009-09/time-series.ome.xml: [testng] [2024-11-20 04:34:20,666] [pool-1-thread-10] Initializing /data/samples/Antarctic_Diatom_D3D_01.ome: [testng] [2024-11-20 04:34:21,566] [pool-1-thread-9] Initializing /data/public/2010-04/filter.ome.xml: [testng] [2024-11-20 04:34:22,068] [pool-1-thread-1] Initializing /data/public/2011-06/multi-channel-time-series.ome.xml: [testng] [2024-11-20 04:34:25,013] [pool-1-thread-5] Initializing /data/public/2013-06/spim.ome.xml: [testng] [2024-11-20 04:34:25,526] [pool-1-thread-4] Initializing /data/public/2016-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-20 04:34:26,027] [pool-1-thread-7] Initializing /data/public/2011-06/metadata-only.ome.xml: [testng] [2024-11-20 04:34:26,514] [pool-1-thread-2] Initializing /data/public/2016-06/tagannotation.ome.xml: [testng] [2024-11-20 04:34:27,002] [pool-1-thread-3] Initializing /data/public/2016-06/multi-channel.ome.xml: [testng] [2024-11-20 04:34:27,449] [pool-1-thread-6] Initializing /data/public/2016-06/timestampannotation-posix-only.ome.xml: [testng] [2024-11-20 04:34:27,905] [pool-1-thread-8] Initializing /data/public/2015-01/metadata-only.ome.xml: [testng] [2024-11-20 04:34:28,401] [pool-1-thread-11] Initializing /data/public/2015-01/tagannotation.ome.xml: [testng] [2024-11-20 04:34:30,311] [pool-1-thread-9] Initializing /data/public/2008-09/dataset-group-project.ome.xml: [testng] [2024-11-20 04:34:32,033] [pool-1-thread-1] Initializing /data/public/2012-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-20 04:34:34,007] [pool-1-thread-8] Initializing /data/public/2015-01/timestampannotation-posix-only.ome.xml: [testng] [2024-11-20 04:34:34,554] [pool-1-thread-7] Initializing /data/public/2016-06/multi-channel-time-series.ome.xml: [testng] [2024-11-20 04:34:35,038] [pool-1-thread-11] Initializing /data/public/2010-04/metadata-only.ome.xml: [testng] [2024-11-20 04:34:35,510] [pool-1-thread-3] Initializing /data/public/2010-06/metadata-only.ome.xml: [testng] [2024-11-20 04:34:36,004] [pool-1-thread-2] Initializing /data/public/2016-06/multi-channel-z-series.ome.xml: [testng] [2024-11-20 04:34:36,439] [pool-1-thread-6] Initializing /data/public/2016-06/metadata-only.ome.xml: [testng] [2024-11-20 04:34:36,888] [pool-1-thread-10] Initializing /data/public/2012-06/transformations-upgrade.ome.xml: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10706, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 43 seconds Finished: SUCCESS