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Started by upstream project "BIOFORMATS-test-repo" build number 262 originally caused by: Started by upstream project "Trigger" build number 286 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins17360614293628773443.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_41413_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 04:13:14,469 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 04:13:14,470 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 04:13:14,470 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:13:14,471 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:13:14,471 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:13:14,472 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:13:14,472 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:13:14,472 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:13:14,473 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:13:14,473 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:13:14,473 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:13:14,474 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:13:14,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:13:14,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:13:14,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:13:14,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:13:14,657 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:13:14,657 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:13:14,657 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:13:14,658 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:13:14,658 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 04:13:14,658 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 04:13:14,658 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 185 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-21 04:13:14,667] [main] java.version = 21 [testng] 04:13:14,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:13:14,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:13:14,709 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-21_04-13-14.log] [testng] 04:13:14,711 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-11-21 04:13:14,712] [main] testng.directory = /data [testng] [2024-11-21 04:13:14,712] [main] testng.configDirectory = /config [testng] [2024-11-21 04:13:14,721] [main] testng.multiplier = 1.0 [testng] [2024-11-21 04:13:14,721] [main] testng.in-memory = false [testng] [2024-11-21 04:13:14,721] [main] testng.allow-missing = false [testng] [2024-11-21 04:13:14,721] [main] user.language = en [testng] [2024-11-21 04:13:14,721] [main] user.country = ${user.country} [testng] [2024-11-21 04:13:14,721] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-21 04:15:39,076] [main] ---------------------------------------- [testng] [2024-11-21 04:15:39,076] [main] Total files: 15735 [testng] [2024-11-21 04:15:39,076] [main] Scan time: 144.354 s (9 ms/file) [testng] [2024-11-21 04:15:39,077] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-21 04:19:51,270] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 04:19:51,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:19:51,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:19:51,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-21_04-19-51.log] [testng] 04:19:51,272 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b24666c - End of configuration. [testng] [2024-11-21 04:19:53,056] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] 04:19:53,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:19:53,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:19:53,057 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-21_04-19-53.log] [testng] 04:19:53,058 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6475a73b - End of configuration. [testng] [2024-11-21 04:19:54,401] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] 04:19:54,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:19:54,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:19:54,402 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-21_04-19-54.log] [testng] 04:19:54,403 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13a088ec - End of configuration. [testng] [2024-11-21 04:19:55,901] [pool-1-thread-10] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] 04:19:55,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:19:55,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:19:55,902 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-21_04-19-55.log] [testng] 04:19:55,902 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ef80fab - End of configuration. [testng] [2024-11-21 04:19:58,564] [pool-1-thread-9] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] 04:19:58,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:19:58,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:19:58,565 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-21_04-19-58.log] [testng] 04:19:58,566 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a65fe9a - End of configuration. [testng] [2024-11-21 04:19:59,926] [pool-1-thread-8] Initializing /data/converted/lior/live+cf5b.tif: [testng] 04:19:59,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:19:59,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:19:59,927 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-21_04-19-59.log] [testng] 04:19:59,927 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53ff2f96 - End of configuration. [testng] [2024-11-21 04:20:01,364] [pool-1-thread-7] Initializing /data/scott/Slide133-01.tif: [testng] 04:20:01,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:20:01,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:20:01,365 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-21_04-20-01.log] [testng] 04:20:01,366 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bce6f07 - End of configuration. [testng] [2024-11-21 04:20:03,104] [pool-1-thread-6] Initializing /data/scott/Slide133-04.tif: [testng] 04:20:03,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:20:03,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:20:03,105 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-21_04-20-03.log] [testng] 04:20:03,105 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26721ea0 - End of configuration. [testng] [2024-11-21 04:20:04,425] [pool-1-thread-5] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 04:20:04,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:20:04,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:20:04,426 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-21_04-20-04.log] [testng] 04:20:04,427 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bb8195c - End of configuration. [testng] [2024-11-21 04:20:06,136] [pool-1-thread-4] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 04:20:06,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:20:06,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:20:06,136 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-21_04-20-06.log] [testng] 04:20:06,137 |-INFO in ch.qos.logback.core.sift.SiftProcessor@223b1703 - End of configuration. [testng] [2024-11-21 04:20:07,828] [pool-1-thread-3] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] 04:20:07,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:20:07,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:20:07,829 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-21_04-20-07.log] [testng] 04:20:07,830 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69dbe386 - End of configuration. [testng] [2024-11-21 04:20:09,424] [pool-1-thread-2] Initializing /data/scott/Slide133-08.tif: [testng] 04:20:09,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:20:09,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:20:09,425 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-21_04-20-09.log] [testng] 04:20:09,425 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b69b5d - End of configuration. [testng] [2024-11-21 04:20:35,368] [pool-1-thread-11] Initializing /data/converted/michel/c.tif: [testng] [2024-11-21 04:20:37,123] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-11-21 04:20:38,862] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-11-21 04:20:40,968] [pool-1-thread-7] Initializing /data/converted/converted/damian.tif: [testng] [2024-11-21 04:20:43,007] [pool-1-thread-2] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-11-21 04:20:53,337] [pool-1-thread-4] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-11-21 04:20:55,462] [pool-1-thread-9] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-11-21 04:21:06,390] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-11-21 04:21:15,870] [pool-1-thread-7] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-11-21 04:21:17,898] [pool-1-thread-2] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-11-21 04:21:27,788] [pool-1-thread-11] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-11-21 04:21:36,142] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-11-21 04:21:46,232] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-11-21 04:21:48,933] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-11-21 04:24:19,234] [pool-1-thread-5] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-11-21 04:24:58,014] [pool-1-thread-9] Initializing /data/scott/Slide133-11.tif: [testng] [2024-11-21 04:25:17,530] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-11-21 04:25:30,280] [pool-1-thread-9] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-11-21 04:25:36,652] [pool-1-thread-3] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-11-21 04:25:57,460] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-11-21 04:26:13,217] [pool-1-thread-3] Initializing /data/converted/michel/b.tif: [testng] [2024-11-21 04:26:25,243] [pool-1-thread-4] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-11-21 04:26:53,827] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-11-21 04:27:16,149] [pool-1-thread-5] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-11-21 04:27:37,335] [pool-1-thread-7] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-11-21 04:28:19,525] [pool-1-thread-7] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-11-21 04:28:45,559] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-11-21 04:28:58,372] [pool-1-thread-11] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-11-21 04:29:31,918] [pool-1-thread-7] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-11-21 04:30:03,157] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-11-21 04:30:38,863] [pool-1-thread-2] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-11-21 04:31:10,443] [pool-1-thread-2] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-11-21 04:31:11,911] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-11-21 04:32:26,712] [pool-1-thread-6] Initializing /data/converted/nicolas/image.tif: [testng] [2024-11-21 04:32:45,130] [pool-1-thread-6] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-11-21 04:34:16,674] [pool-1-thread-6] Initializing /data/converted/dietmar/137.tif: [testng] [2024-11-21 04:34:22,930] [pool-1-thread-3] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-11-21 04:34:41,632] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-11-21 04:35:20,549] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-11-21 04:36:26,020] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-11-21 04:36:41,727] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-11-21 04:36:50,125] [pool-1-thread-5] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-11-21 04:37:13,944] [pool-1-thread-9] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-11-21 04:37:54,730] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2024-11-21 04:38:30,498] [pool-1-thread-12] Initializing /data/converted/sebastien/test.tif: [testng] [2024-11-21 04:38:33,101] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-11-21 04:38:57,315] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-11-21 04:42:26,020] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-11-21 04:43:15,179] [pool-1-thread-8] Initializing /data/othmar/mozaic.tif: [testng] [2024-11-21 04:44:12,356] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-11-21 04:45:23,150] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-11-21 04:45:30,433] [pool-1-thread-6] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-11-21 04:46:07,980] [pool-1-thread-6] Initializing /data/converted/converted/2chz.tif: [testng] [2024-11-21 04:48:13,372] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-11-21 04:48:26,454] [pool-1-thread-8] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-11-21 04:49:01,635] [pool-1-thread-8] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-11-21 04:49:15,787] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-11-21 04:49:47,307] [pool-1-thread-8] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-11-21 04:49:50,239] [pool-1-thread-11] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-11-21 04:50:29,201] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-11-21 04:50:40,593] [pool-1-thread-8] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-11-21 04:51:03,328] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-11-21 04:51:38,698] [pool-1-thread-11] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-11-21 04:54:27,235] [pool-1-thread-11] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-11-21 04:55:11,134] [pool-1-thread-3] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-11-21 04:56:02,427] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-11-21 04:57:38,178] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-11-21 04:58:24,828] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-11-21 04:58:52,271] [pool-1-thread-11] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-11-21 04:59:54,692] [pool-1-thread-11] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-11-21 05:00:05,355] [pool-1-thread-2] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-11-21 05:03:23,591] [pool-1-thread-6] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-11-21 05:03:42,633] [pool-1-thread-6] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-11-21 05:03:52,237] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-11-21 05:04:29,460] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-11-21 05:05:16,919] [pool-1-thread-6] Initializing /data/converted/michel/d.tif: [testng] [2024-11-21 05:05:20,578] [pool-1-thread-9] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-11-21 05:06:20,473] [pool-1-thread-6] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-11-21 05:06:47,127] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-11-21 05:07:40,170] [pool-1-thread-7] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-11-21 05:10:04,015] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-11-21 05:10:31,637] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-11-21 05:10:47,783] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-11-21 05:11:48,291] [pool-1-thread-1] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-11-21 05:13:03,526] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-11-21 05:13:17,497] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-11-21 05:20:44,436] [pool-1-thread-12] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-11-21 05:21:58,295] [pool-1-thread-12] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-11-21 05:22:38,507] [pool-1-thread-12] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-11-21 05:23:54,154] [pool-1-thread-12] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-11-21 05:24:10,521] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-11-21 05:24:34,301] [pool-1-thread-7] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-11-21 05:24:37,520] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-11-21 05:25:16,608] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-11-21 05:26:43,510] [pool-1-thread-4] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-11-21 05:27:16,213] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-11-21 05:29:00,726] [pool-1-thread-6] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-11-21 05:33:09,007] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-11-21 05:33:51,608] [pool-1-thread-9] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-11-21 05:34:30,250] [pool-1-thread-9] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-11-21 05:37:05,942] [pool-1-thread-3] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-11-21 05:37:14,527] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-11-21 05:39:23,575] [pool-1-thread-1] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-11-21 05:39:40,809] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-11-21 05:40:17,992] [pool-1-thread-1] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-11-21 05:40:31,441] [pool-1-thread-6] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-11-21 05:40:48,432] [pool-1-thread-11] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-11-21 05:41:25,761] [pool-1-thread-11] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 05:42:09,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 05:42:09,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:42:09,470 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-21_05-42-09.log] [testng] 05:42:09,471 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ca07615 - End of configuration. [testng] [2024-11-21 05:42:10,427] [pool-1-thread-11] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-11-21 05:42:53,582] [pool-1-thread-11] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-11-21 05:42:57,322] [pool-1-thread-3] Initializing /data/converted/michel/e.tif: [testng] [2024-11-21 05:43:14,757] [pool-1-thread-1] Initializing /data/converted/dietmar/138.tif: [testng] [2024-11-21 05:43:28,630] [pool-1-thread-6] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 06:41:52,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 06:41:52,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:41:52,294 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-21_06-41-52.log] [testng] 06:41:52,294 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75a7d0a1 - End of configuration. [testng] 06:45:01,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:45:01,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:45:01,936 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-21_06-45-01.log] [testng] 06:45:01,936 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3310bb28 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 151 minutes 51 seconds Finished: SUCCESS