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Started by upstream project "BIOFORMATS-test-repo" build number 264 originally caused by: Started by upstream project "Trigger" build number 287 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins6443935040685589219.sh + '[' ome-xml = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_41748_merge_ci -v /uod/idr/repos/curated/ome-xml:/data -v /uod/idr-scratch/merge-ci/curated/ome-xml:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 04:36:56,426 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 04:36:56,428 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 04:36:56,428 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:36:56,429 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:36:56,429 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:36:56,429 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:36:56,429 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:36:56,429 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:36:56,430 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:36:56,430 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:36:56,430 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:36:56,430 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:36:56,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:36:56,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:36:56,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:36:56,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:36:56,681 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:36:56,681 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:36:56,681 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:36:56,681 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:36:56,682 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 04:36:56,682 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 04:36:56,682 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 252 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-22 04:36:56,692] [main] java.version = 1.8.0_342 [testng] 04:36:56,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:36:56,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:56,738 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-22_04-36-56.log] [testng] 04:36:56,740 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-11-22 04:36:56,742] [main] testng.directory = /data [testng] [2024-11-22 04:36:56,742] [main] testng.configDirectory = /config [testng] [2024-11-22 04:36:56,753] [main] testng.multiplier = 1.0 [testng] [2024-11-22 04:36:56,753] [main] testng.in-memory = false [testng] [2024-11-22 04:36:56,753] [main] testng.allow-missing = false [testng] [2024-11-22 04:36:56,753] [main] user.language = en [testng] [2024-11-22 04:36:56,754] [main] user.country = ${user.country} [testng] [2024-11-22 04:36:56,754] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-11-22 04:37:02,025] [main] ---------------------------------------- [testng] [2024-11-22 04:37:02,025] [main] Total files: 203 [testng] [2024-11-22 04:37:02,026] [main] Scan time: 5.271 s (25 ms/file) [testng] [2024-11-22 04:37:02,026] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 202 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-22 04:39:19,852] [pool-1-thread-1] Initializing /data/public/2010-04/multi-channel-time-series.ome.xml: [testng] 04:39:19,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:39:19,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:19,855 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-22_04-39-19.log] [testng] 04:39:19,856 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5186ac71 - End of configuration. [testng] [2024-11-22 04:39:20,402] [pool-1-thread-12] Initializing /data/public/2015-01/timestampannotation.ome.xml: [testng] 04:39:20,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:39:20,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:20,403 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-22_04-39-20.log] [testng] 04:39:20,403 |-INFO in ch.qos.logback.core.sift.SiftProcessor@edb31f4 - End of configuration. [testng] [2024-11-22 04:39:21,002] [pool-1-thread-11] Initializing /data/public/2013-06/z-series-time-series.ome.xml: [testng] 04:39:21,002 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:39:21,002 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:21,003 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-22_04-39-21.log] [testng] 04:39:21,003 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5941ee51 - End of configuration. [testng] [2024-11-22 04:39:21,544] [pool-1-thread-10] Initializing /data/public/2015-01/multi-channel.ome.xml: [testng] 04:39:21,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:39:21,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:21,545 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-22_04-39-21.log] [testng] 04:39:21,546 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c61f335 - End of configuration. [testng] [2024-11-22 04:39:22,068] [pool-1-thread-9] Initializing /data/samples/Sample-2007_06.ome: [testng] 04:39:22,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:39:22,069 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:22,069 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-22_04-39-22.log] [testng] 04:39:22,069 |-INFO in ch.qos.logback.core.sift.SiftProcessor@481b31da - End of configuration. [testng] [2024-11-22 04:39:22,651] [pool-1-thread-8] Initializing /data/public/2016-06/filter.ome.xml: [testng] 04:39:22,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:39:22,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:22,651 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-22_04-39-22.log] [testng] 04:39:22,652 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c3eb5c1 - End of configuration. [testng] [2024-11-22 04:39:23,211] [pool-1-thread-7] Initializing /data/public/2013-06/xmlannotation-svg.ome.xml: [testng] 04:39:23,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:39:23,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:23,212 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-22_04-39-23.log] [testng] 04:39:23,212 |-INFO in ch.qos.logback.core.sift.SiftProcessor@587251b9 - End of configuration. [testng] [2024-11-22 04:39:23,739] [pool-1-thread-6] Initializing /data/public/2009-09/metadata-only.ome.xml: [testng] 04:39:23,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:39:23,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:23,740 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-22_04-39-23.log] [testng] 04:39:23,740 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5634ce96 - End of configuration. [testng] [2024-11-22 04:39:24,319] [pool-1-thread-5] Initializing /data/public/2016-06/one-screen-one-plate-four-wells.ome.xml: [testng] 04:39:24,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:39:24,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:24,319 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-22_04-39-24.log] [testng] 04:39:24,320 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d40ea69 - End of configuration. [testng] [2024-11-22 04:39:24,862] [pool-1-thread-4] Initializing /data/public/2011-06/one-screen-one-plate-four-wells.ome.xml: [testng] 04:39:24,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:39:24,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:24,863 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-22_04-39-24.log] [testng] 04:39:24,863 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72ee1c94 - End of configuration. [testng] [2024-11-22 04:39:25,441] [pool-1-thread-3] Initializing /data/public/2011-06/instrument.ome.xml: [testng] 04:39:25,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:39:25,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:25,442 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-22_04-39-25.log] [testng] 04:39:25,442 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19baf07b - End of configuration. [testng] [2024-11-22 04:39:25,991] [pool-1-thread-2] Initializing /data/public/2016-06/transformations-upgrade.ome.xml: [testng] 04:39:25,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:39:25,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:39:25,992 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-22_04-39-25.log] [testng] 04:39:25,992 |-INFO in ch.qos.logback.core.sift.SiftProcessor@698b81ef - End of configuration. [testng] [2024-11-22 04:39:33,287] [pool-1-thread-8] Initializing /data/public/2010-06/spim.ome.xml: [testng] [2024-11-22 04:39:33,919] [pool-1-thread-9] Initializing /data/public/2008-09/instrument.ome.xml: [testng] [2024-11-22 04:39:34,478] [pool-1-thread-6] Initializing /data/public/2016-06/tagannotation.ome.xml: [testng] [2024-11-22 04:39:35,015] [pool-1-thread-10] Initializing /data/public/2016-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-22 04:39:35,612] [pool-1-thread-11] Initializing /data/public/2009-09/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-22 04:39:36,211] [pool-1-thread-7] Initializing /data/samples/sdub.ome: [testng] [2024-11-22 04:39:36,909] [pool-1-thread-3] Initializing /data/public/2009-09/multi-channel-time-series.ome.xml: [testng] [2024-11-22 04:39:37,404] [pool-1-thread-1] Initializing /data/public/2015-01/xmlannotation-multi-value.ome.xml: [testng] [2024-11-22 04:39:37,891] [pool-1-thread-2] Initializing /data/public/2012-06/instrument.ome.xml: [testng] [2024-11-22 04:39:38,417] [pool-1-thread-5] Initializing /data/public/2011-06/xmlannotation-svg.ome.xml: [testng] [2024-11-22 04:39:38,909] [pool-1-thread-12] Initializing /data/public/2010-06/metadata-only.ome.xml: [testng] [2024-11-22 04:39:39,383] [pool-1-thread-4] Initializing /data/public/2010-04/z-series.ome.xml: [testng] [2024-11-22 04:39:45,336] [pool-1-thread-12] Initializing /data/public/2008-09/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-22 04:39:45,863] [pool-1-thread-2] Initializing /data/public/2010-04/multi-channel.ome.xml: [testng] [2024-11-22 04:39:46,379] [pool-1-thread-8] Initializing /data/public/2008-09/single-image.ome.xml: [testng] [2024-11-22 04:39:46,877] [pool-1-thread-11] Initializing /data/public/2010-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-22 04:39:47,393] [pool-1-thread-3] Initializing /data/public/2016-06/instrument-units-alternate.ome.xml: [testng] [2024-11-22 04:39:47,882] [pool-1-thread-10] Initializing /data/public/2013-06/metadata-only.ome.xml: [testng] [2024-11-22 04:39:48,386] [pool-1-thread-4] Initializing /data/public/2012-06/multi-channel.ome.xml: [testng] [2024-11-22 04:39:48,886] [pool-1-thread-5] Initializing /data/public/2009-09/time-series.ome.xml: [testng] [2024-11-22 04:39:49,414] [pool-1-thread-1] Initializing /data/public/2012-06/no-date.ome.xml: [testng] [2024-11-22 04:39:49,893] [pool-1-thread-6] Initializing /data/public/2012-06/multi-channel-z-series.ome.xml: [testng] [2024-11-22 04:39:50,407] [pool-1-thread-9] Initializing /data/public/2011-06/multi-channel-z-series.ome.xml: [testng] [2024-11-22 04:39:51,498] [pool-1-thread-7] Initializing /data/public/2010-04/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-22 04:39:56,176] [pool-1-thread-10] Initializing /data/public/2013-06/single-image.ome.xml: [testng] [2024-11-22 04:39:56,665] [pool-1-thread-6] Initializing /data/public/2012-06/z-series-time-series.ome.xml: [testng] [2024-11-22 04:39:57,168] [pool-1-thread-8] Initializing /data/public/2016-06/multi-channel.ome.xml: [testng] [2024-11-22 04:39:57,641] [pool-1-thread-9] Initializing /data/public/2015-01/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-22 04:39:58,133] [pool-1-thread-1] Initializing /data/public/2015-01/metadata-only.ome.xml: [testng] [2024-11-22 04:39:58,617] [pool-1-thread-4] Initializing /data/public/2015-01/hcs.ome.xml: [testng] [2024-11-22 04:39:59,089] [pool-1-thread-5] Initializing /data/public/2015-01/transformations-upgrade.ome.xml: [testng] [2024-11-22 04:39:59,598] [pool-1-thread-3] Initializing /data/public/2011-06/time-series.ome.xml: [testng] [2024-11-22 04:40:00,063] [pool-1-thread-2] Initializing /data/public/2016-06/no-date.ome.xml: [testng] [2024-11-22 04:40:00,517] [pool-1-thread-11] Initializing /data/public/2013-06/z-series.ome.xml: [testng] [2024-11-22 04:40:00,993] [pool-1-thread-12] Initializing /data/public/2010-04/metadata-only.ome.xml: [testng] [2024-11-22 04:40:01,919] [pool-1-thread-7] Initializing /data/public/2016-06/timestampannotation-posix-only.ome.xml: [testng] [2024-11-22 04:40:07,010] [pool-1-thread-11] Initializing /data/public/2010-04/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-22 04:40:07,628] [pool-1-thread-6] Initializing /data/public/2011-06/no-date.ome.xml: [testng] [2024-11-22 04:40:08,120] [pool-1-thread-2] Initializing /data/public/2012-06/z-series.ome.xml: [testng] [2024-11-22 04:40:08,600] [pool-1-thread-1] Initializing /data/curtis/black6-7.tif: [testng] [2024-11-22 04:40:11,293] [pool-1-thread-3] Initializing /data/public/2008-09/multi-pixel-default.ome.xml: [testng] [2024-11-22 04:40:11,767] [pool-1-thread-8] Initializing /data/public/2008-09/z-series-time-series.ome.xml: [testng] [2024-11-22 04:40:12,243] [pool-1-thread-10] Initializing /data/public/2015-01/xmlannotation-svg.ome.xml: [testng] [2024-11-22 04:40:12,731] [pool-1-thread-4] Initializing /data/public/2010-06/ROI.ome.xml: [testng] [2024-11-22 04:40:13,219] [pool-1-thread-5] Initializing /data/public/2013-06/spim.ome.xml: [testng] [2024-11-22 04:40:13,767] [pool-1-thread-9] Initializing /data/public/2012-06/metadata-only.ome.xml: [testng] [2024-11-22 04:40:14,250] [pool-1-thread-12] Initializing /data/public/2012-06/tagannotation.ome.xml: [testng] [2024-11-22 04:40:14,750] [pool-1-thread-7] Initializing /data/public/2013-06/no-date.ome.xml: [testng] [2024-11-22 04:40:20,415] [pool-1-thread-9] Initializing /data/public/2008-09/multi-channel-z-series.ome.xml: [testng] [2024-11-22 04:40:20,885] [pool-1-thread-6] Initializing /data/public/2010-06/xmlannotation-svg.ome.xml: [testng] [2024-11-22 04:40:21,367] [pool-1-thread-2] Initializing /data/public/2013-06/transformations-upgrade.ome.xml: [testng] [2024-11-22 04:40:21,862] [pool-1-thread-12] Initializing /data/public/2016-06/multi-channel-z-series.ome.xml: [testng] [2024-11-22 04:40:22,340] [pool-1-thread-7] Initializing /data/public/2010-06/filter.ome.xml: [testng] [2024-11-22 04:40:22,811] [pool-1-thread-10] Initializing /data/public/2013-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-22 04:40:23,288] [pool-1-thread-4] Initializing /data/public/2016-06/ROI.ome.xml: [testng] [2024-11-22 04:40:23,779] [pool-1-thread-3] Initializing /data/public/2010-04/multi-channel-z-series.ome.xml: [testng] [2024-11-22 04:40:24,230] [pool-1-thread-5] Initializing /data/public/2008-09/z-series.ome.xml: [testng] [2024-11-22 04:40:24,690] [pool-1-thread-8] Initializing /data/public/2010-06/multi-channel-z-series.ome.xml: [testng] [2024-11-22 04:40:25,147] [pool-1-thread-11] Initializing /data/public/2008-09/dataset-group-project.ome.xml: [testng] [2024-11-22 04:40:30,664] [pool-1-thread-4] Initializing /data/public/2013-06/timestampannotation.ome.xml: [testng] [2024-11-22 04:40:31,183] [pool-1-thread-3] Initializing /data/public/2012-06/transformations-downgrade.ome.xml: [testng] [2024-11-22 04:40:31,649] [pool-1-thread-12] Initializing /data/public/2015-01/minimum-specification.ome.xml: [testng] [2024-11-22 04:40:32,104] [pool-1-thread-9] Initializing /data/public/2012-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-22 04:40:32,584] [pool-1-thread-8] Initializing /data/public/2016-06/hcs.ome.xml: [testng] [2024-11-22 04:40:33,044] [pool-1-thread-10] Initializing /data/public/2015-01/timestampannotation-posix-only.ome.xml: [testng] [2024-11-22 04:40:33,531] [pool-1-thread-6] Initializing /data/public/2012-06/multi-channel-time-series.ome.xml: [testng] [2024-11-22 04:40:33,997] [pool-1-thread-5] Initializing /data/public/2009-09/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-22 04:40:34,492] [pool-1-thread-7] Initializing /data/public/2010-04/single-image.ome.xml: [testng] [2024-11-22 04:40:34,947] [pool-1-thread-2] Initializing /data/public/2016-06/multi-channel-time-series.ome.xml: [testng] [2024-11-22 04:40:35,423] [pool-1-thread-11] Initializing /data/public/2015-01/z-series-time-series.ome.xml: [testng] [2024-11-22 04:40:41,084] [pool-1-thread-12] Initializing /data/samples/Sample-2008_02.ome: [testng] [2024-11-22 04:40:41,666] [pool-1-thread-7] Initializing /data/public/2010-06/instrument.ome.xml: [testng] [2024-11-22 04:40:42,132] [pool-1-thread-2] Initializing /data/public/2012-06/single-image.ome.xml: [testng] [2024-11-22 04:40:42,581] [pool-1-thread-11] Initializing /data/public/2010-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-22 04:40:43,066] [pool-1-thread-8] Initializing /data/samples/Sample-2003-custom-ST.ome: [testng] [2024-11-22 04:40:43,563] [pool-1-thread-6] Initializing /data/public/2008-09/multi-channel.ome.xml: [testng] [2024-11-22 04:40:44,032] [pool-1-thread-9] Initializing /data/public/2013-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-22 04:40:44,546] [pool-1-thread-3] Initializing /data/public/2016-06/timestampannotation.ome.xml: [testng] [2024-11-22 04:40:45,020] [pool-1-thread-10] Initializing /data/public/2015-01/time-series.ome.xml: [testng] [2024-11-22 04:40:45,491] [pool-1-thread-5] Initializing /data/public/2010-06/multi-channel-time-series.ome.xml: [testng] [2024-11-22 04:40:45,955] [pool-1-thread-4] Initializing /data/public/2015-01/spim.ome.xml: [testng] [2024-11-22 04:40:46,453] [pool-1-thread-1] Initializing /data/public/2012-06/spim.ome.xml: [testng] [2024-11-22 04:40:52,104] [pool-1-thread-10] Initializing /data/public/2015-01/commentannotation.ome.xml: [testng] [2024-11-22 04:40:52,591] [pool-1-thread-5] Initializing /data/public/2010-06/no-date.ome.xml: [testng] [2024-11-22 04:40:53,032] [pool-1-thread-4] Initializing /data/curtis/black0.ome: [testng] [2024-11-22 04:40:53,690] [pool-1-thread-1] Initializing /data/public/2009-09/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-22 04:40:54,221] [pool-1-thread-12] Initializing /data/public/2015-01/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-22 04:40:54,686] [pool-1-thread-7] Initializing /data/samples/test.OME: [testng] [2024-11-22 04:40:55,152] [pool-1-thread-8] Initializing /data/public/2010-06/single-image.ome.xml: [testng] [2024-11-22 04:40:55,608] [pool-1-thread-9] Initializing /data/public/2012-06/transformations-upgrade.ome.xml: [testng] [2024-11-22 04:40:56,078] [pool-1-thread-3] Initializing /data/public/2015-01/z-series.ome.xml: [testng] [2024-11-22 04:40:56,538] [pool-1-thread-11] Initializing /data/public/2015-01/no-date.ome.xml: [testng] [2024-11-22 04:40:56,993] [pool-1-thread-6] Initializing /data/public/2009-09/single-image.ome.xml: [testng] [2024-11-22 04:40:57,457] [pool-1-thread-2] Initializing /data/public/2012-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-22 04:41:02,946] [pool-1-thread-7] Initializing /data/public/2009-09/instrument.ome.xml: [testng] [2024-11-22 04:41:03,451] [pool-1-thread-6] Initializing /data/curtis/black6-7.ome: [testng] [2024-11-22 04:41:04,124] [pool-1-thread-8] Initializing /data/public/2013-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-22 04:41:04,629] [pool-1-thread-5] Initializing /data/public/2015-01/tagannotation.ome.xml: [testng] [2024-11-22 04:41:05,104] [pool-1-thread-3] Initializing /data/public/2015-01/filter.ome.xml: [testng] [2024-11-22 04:41:05,562] [pool-1-thread-11] Initializing /data/samples/testImportPlateMultiplePlateAcquisitions1508.ome: [testng] [2024-11-22 04:41:06,204] [pool-1-thread-10] Initializing /data/public/2013-06/filter.ome.xml: [testng] [2024-11-22 04:41:06,666] [pool-1-thread-2] Initializing /data/public/2016-06/instrument-units-default.ome.xml: [testng] [2024-11-22 04:41:07,150] [pool-1-thread-12] Initializing /data/public/2008-09/time-series.ome.xml: [testng] [2024-11-22 04:41:07,601] [pool-1-thread-9] Initializing /data/public/2015-01/xmlannotation-body-space.ome.xml: [testng] [2024-11-22 04:41:08,095] [pool-1-thread-1] Initializing /data/public/2016-06/transformations-downgrade.ome.xml: [testng] [2024-11-22 04:41:08,582] [pool-1-thread-4] Initializing /data/public/2008-09/multi-channel-time-series.ome.xml: [testng] [2024-11-22 04:41:11,856] [pool-1-thread-7] Initializing /data/public/2015-01/instrument-units-alternate.ome.xml: [testng] [2024-11-22 04:41:14,180] [pool-1-thread-5] Initializing /data/public/2009-09/z-series.ome.xml: [testng] [2024-11-22 04:41:14,675] [pool-1-thread-10] Initializing /data/public/2011-06/multi-channel.ome.xml: [testng] [2024-11-22 04:41:15,162] [pool-1-thread-3] Initializing /data/public/2010-04/ROI.ome.xml: [testng] [2024-11-22 04:41:15,640] [pool-1-thread-1] Initializing /data/curtis/all-black.ome: [testng] [2024-11-22 04:41:16,154] [pool-1-thread-8] Initializing /data/public/2015-01/instrument-units-default.ome.xml: [testng] [2024-11-22 04:41:16,661] [pool-1-thread-4] Initializing /data/public/2013-06/time-series.ome.xml: [testng] [2024-11-22 04:41:17,139] [pool-1-thread-2] Initializing /data/public/2016-06/instrument.ome.xml: [testng] [2024-11-22 04:41:17,693] [pool-1-thread-12] Initializing /data/public/2011-06/spim.ome.xml: [testng] [2024-11-22 04:41:18,225] [pool-1-thread-11] Initializing /data/public/2010-06/time-series.ome.xml: [testng] [2024-11-22 04:41:18,738] [pool-1-thread-9] Initializing /data/public/2013-06/multi-channel-time-series.ome.xml: [testng] [2024-11-22 04:41:19,314] [pool-1-thread-6] Initializing /data/public/2016-06/commentannotation.ome.xml: [testng] [2024-11-22 04:41:22,592] [pool-1-thread-7] Initializing /data/public/2008-09/multi-pixel-aquired.ome.xml: [testng] [2024-11-22 04:41:24,902] [pool-1-thread-6] Initializing /data/public/2009-09/multi-channel.ome.xml: [testng] [2024-11-22 04:41:25,415] [pool-1-thread-5] Initializing /data/public/2015-01/ROI.ome.xml: [testng] [2024-11-22 04:41:25,935] [pool-1-thread-9] Initializing /data/public/2011-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-22 04:41:26,483] [pool-1-thread-1] Initializing /data/public/2016-06/z-series-time-series.ome.xml: [testng] [2024-11-22 04:41:26,964] [pool-1-thread-12] Initializing /data/public/2011-06/z-series.ome.xml: [testng] [2024-11-22 04:41:27,421] [pool-1-thread-4] Initializing /data/public/2011-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-22 04:41:27,873] [pool-1-thread-3] Initializing /data/public/2013-06/multi-channel-z-series.ome.xml: [testng] [2024-11-22 04:41:28,338] [pool-1-thread-11] Initializing /data/public/2016-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-11-22 04:41:28,811] [pool-1-thread-2] Initializing /data/public/2016-06/xmlannotation-svg.ome.xml: [testng] [2024-11-22 04:41:29,256] [pool-1-thread-8] Initializing /data/public/2012-06/xmlannotation-svg.ome.xml: [testng] [2024-11-22 04:41:29,723] [pool-1-thread-10] Initializing /data/public/2010-04/time-series.ome.xml: [testng] [2024-11-22 04:41:32,904] [pool-1-thread-7] Initializing /data/mario/Hoechst_ND - n000000.tif: [testng] [2024-11-22 04:41:37,438] [pool-1-thread-2] Initializing /data/public/2013-06/xmlannotation-multi-value.ome.xml: [testng] [2024-11-22 04:41:37,943] [pool-1-thread-3] Initializing /data/public/2013-06/tagannotation.ome.xml: [testng] [2024-11-22 04:41:38,491] [pool-1-thread-12] Initializing /data/curtis/black0.tif: [testng] [2024-11-22 04:41:41,180] [pool-1-thread-10] Initializing /data/public/2009-09/ROI.ome.xml: [testng] [2024-11-22 04:41:41,721] [pool-1-thread-6] Initializing /data/public/2016-06/z-series.ome.xml: [testng] [2024-11-22 04:41:42,251] [pool-1-thread-11] Initializing /data/public/2016-06/time-series.ome.xml: [testng] [2024-11-22 04:41:42,758] [pool-1-thread-4] Initializing /data/public/2011-06/metadata-only.ome.xml: [testng] [2024-11-22 04:41:43,216] [pool-1-thread-1] Initializing /data/curtis/all-black.tif: [testng] [2024-11-22 04:41:45,642] [pool-1-thread-8] Initializing /data/public/2015-01/transformations-downgrade.ome.xml: [testng] [2024-11-22 04:41:46,086] [pool-1-thread-5] Initializing /data/public/2016-06/xmlannotation-body-space.ome.xml: [testng] [2024-11-22 04:41:46,532] [pool-1-thread-9] Initializing /data/public/2015-01/instrument.ome.xml: [testng] [2024-11-22 04:41:49,818] [pool-1-thread-3] Initializing /data/johannes/20100625_W3_Ppac_8.ome: [testng] [2024-11-22 04:41:50,456] [pool-1-thread-2] Initializing /data/public/2010-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-22 04:41:52,713] [pool-1-thread-4] Initializing /data/public/2013-06/instrument.ome.xml: [testng] [2024-11-22 04:41:53,228] [pool-1-thread-5] Initializing /data/public/2010-04/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-11-22 04:41:53,753] [pool-1-thread-6] Initializing /data/samples/Sample-2003_FC.ome: [testng] [2024-11-22 04:41:54,228] [pool-1-thread-11] Initializing /data/public/2016-06/folders-simple-taxonomy.ome.xml: [testng] [2024-11-22 04:41:54,709] [pool-1-thread-9] Initializing /data/public/2012-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-22 04:41:55,220] [pool-1-thread-8] Initializing /data/melissa/large-xml-test.ome: [testng] [2024-11-22 04:42:07,048] [pool-1-thread-10] Initializing /data/public/2011-06/z-series-time-series.ome.xml: [testng] [2024-11-22 04:42:10,603] [pool-1-thread-2] Initializing /data/public/2013-06/timestampannotation-posix-only.ome.xml: [testng] [2024-11-22 04:42:11,125] [pool-1-thread-7] Initializing /data/public/2015-01/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-11-22 04:42:11,661] [pool-1-thread-3] Initializing /data/public/2009-09/z-series-time-series.ome.xml: [testng] [2024-11-22 04:42:13,553] [pool-1-thread-4] Initializing /data/public/2013-06/ROI.ome.xml: [testng] [2024-11-22 04:42:14,051] [pool-1-thread-10] Initializing /data/public/2016-06/single-image.ome.xml: [testng] [2024-11-22 04:42:14,525] [pool-1-thread-5] Initializing /data/public/2009-09/multi-channel-z-series.ome.xml: [testng] [2024-11-22 04:42:14,975] [pool-1-thread-6] Initializing /data/public/2016-06/metadata-only.ome.xml: [testng] [2024-11-22 04:42:15,420] [pool-1-thread-9] Initializing /data/public/2011-06/ROI.ome.xml: [testng] [2024-11-22 04:42:15,883] [pool-1-thread-11] Initializing /data/samples/TAABA.ome: [testng] [2024-11-22 04:42:16,922] [pool-1-thread-12] Initializing /data/public/2012-06/ROI.ome.xml: [testng] [2024-11-22 04:42:18,973] [pool-1-thread-2] Initializing /data/public/2015-01/multi-channel-z-series.ome.xml: [testng] [2024-11-22 04:42:19,854] [pool-1-thread-3] Initializing /data/public/2011-06/filter.ome.xml: [testng] [2024-11-22 04:42:20,387] [pool-1-thread-1] Initializing /data/public/2013-06/xmlannotation-body-space.ome.xml: [testng] [2024-11-22 04:42:20,972] [pool-1-thread-7] Initializing /data/public/2012-06/filter.ome.xml: [testng] [2024-11-22 04:42:22,216] [pool-1-thread-10] Initializing /data/public/2016-06/folders-larger-taxonomy.ome.xml: [testng] [2024-11-22 04:42:23,229] [pool-1-thread-6] Initializing /data/public/2016-06/minimum-specification.ome.xml: [testng] [2024-11-22 04:42:23,711] [pool-1-thread-5] Initializing /data/public/2013-06/multi-channel.ome.xml: [testng] [2024-11-22 04:42:24,203] [pool-1-thread-12] Initializing /data/public/2016-06/mapannotation.ome.xml: [testng] [2024-11-22 04:42:24,653] [pool-1-thread-9] Initializing /data/public/2015-01/single-image.ome.xml: [testng] [2024-11-22 04:42:25,079] [pool-1-thread-4] Initializing /data/public/2011-06/single-image.ome.xml: [testng] [2024-11-22 04:42:26,209] [pool-1-thread-2] Initializing /data/public/2010-06/z-series.ome.xml: [testng] [2024-11-22 04:42:27,832] [pool-1-thread-1] Initializing /data/public/2012-06/time-series.ome.xml: [testng] [2024-11-22 04:42:28,340] [pool-1-thread-3] Initializing /data/public/2013-06/transformations-downgrade.ome.xml: [testng] [2024-11-22 04:42:28,850] [pool-1-thread-7] Initializing /data/public/2011-06/multi-channel-time-series.ome.xml: [testng] [2024-11-22 04:42:29,389] [pool-1-thread-11] Initializing /data/public/2015-01/mapannotation.ome.xml: [testng] [2024-11-22 04:42:29,901] [pool-1-thread-10] Initializing /data/public/2010-06/z-series-time-series.ome.xml: [testng] [2024-11-22 04:42:31,891] [pool-1-thread-6] Initializing /data/public/2015-01/multi-channel-time-series.ome.xml: [testng] [2024-11-22 04:42:32,346] [pool-1-thread-4] Initializing /data/sandeep/synth_rbc.ome: [testng] [2024-11-22 04:42:32,982] [pool-1-thread-5] Initializing /data/public/2010-06/multi-channel.ome.xml: [testng] [2024-11-22 04:42:33,418] [pool-1-thread-9] Initializing /data/samples/Antarctic_Diatom_D3D_01.ome: [testng] [2024-11-22 04:42:34,348] [pool-1-thread-12] Initializing /data/public/2010-04/filter.ome.xml: [testng] [2024-11-22 04:42:35,170] [pool-1-thread-2] Initializing /data/public/2011-06/transformations-upgrade.ome.xml: [testng] [2024-11-22 04:42:35,778] [pool-1-thread-1] Initializing /data/public/2013-06/commentannotation.ome.xml: [testng] [2024-11-22 04:42:36,744] [pool-1-thread-3] Initializing /data/curtis/min-sample-2008-02.ome: [testng] [2024-11-22 04:42:38,312] [pool-1-thread-11] Initializing /data/public/2010-04/z-series-time-series.ome.xml: [testng] [2024-11-22 04:42:38,795] [pool-1-thread-10] Initializing /data/public/2010-04/instrument.ome.xml: [testng] [2024-11-22 04:42:39,228] [pool-1-thread-7] Initializing /data/mario/Hoechst_ND - n000000.ome: [testng] [2024-11-22 04:42:41,158] [pool-1-thread-5] Initializing /data/public/2016-06/spim.ome.xml: [testng] [2024-11-22 04:42:41,691] [pool-1-thread-6] Initializing /data/public/2016-06/xmlannotation-multi-value.ome.xml: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10706, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 6 minutes 38 seconds Finished: SUCCESS