![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 266 originally caused by: Started by upstream project "Trigger" build number 289 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins2007132769245087677.sh + '[' lim = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_41955_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:23:18,149 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:23:18,150 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 00:23:18,150 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:23:18,151 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:23:18,152 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:23:18,152 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:23:18,152 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:23:18,152 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:23:18,153 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:23:18,153 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:23:18,153 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:23:18,154 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:23:18,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:23:18,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:23:18,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:23:18,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:23:18,329 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:23:18,329 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:23:18,329 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:23:18,330 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:23:18,330 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 00:23:18,331 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 00:23:18,331 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 178 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-24 00:23:18,339] [main] java.version = 17.0.2 [testng] 00:23:18,342 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:23:18,342 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:18,380 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-24_00-23-18.log] [testng] 00:23:18,381 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-11-24 00:23:18,383] [main] testng.directory = /data [testng] [2024-11-24 00:23:18,383] [main] testng.configDirectory = /config [testng] [2024-11-24 00:23:18,391] [main] testng.multiplier = 1.0 [testng] [2024-11-24 00:23:18,391] [main] testng.in-memory = false [testng] [2024-11-24 00:23:18,391] [main] testng.allow-missing = false [testng] [2024-11-24 00:23:18,392] [main] user.language = en [testng] [2024-11-24 00:23:18,392] [main] user.country = ${user.country} [testng] [2024-11-24 00:23:18,392] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-24 00:23:18,820] [main] ---------------------------------------- [testng] [2024-11-24 00:23:18,820] [main] Total files: 21 [testng] [2024-11-24 00:23:18,820] [main] Scan time: 0.428 s (20 ms/file) [testng] [2024-11-24 00:23:18,820] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 20 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-24 00:23:27,016] [pool-1-thread-1] Initializing /data/venu/Kontrolle0007.lim: [testng] 00:23:27,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:23:27,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:27,017 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-24_00-23-27.log] [testng] 00:23:27,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7785ccc9 - End of configuration. [testng] [2024-11-24 00:23:27,566] [pool-1-thread-12] Initializing /data/venu/Kontrolle0003.lim: [testng] 00:23:27,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:23:27,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:27,567 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-24_00-23-27.log] [testng] 00:23:27,568 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ea94849 - End of configuration. [testng] [2024-11-24 00:23:28,084] [pool-1-thread-11] Initializing /data/venu/Kontrolle0005.lim: [testng] 00:23:28,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:23:28,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:28,085 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-24_00-23-28.log] [testng] 00:23:28,086 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e20d3c9 - End of configuration. [testng] [2024-11-24 00:23:28,613] [pool-1-thread-10] Initializing /data/venu/Kontrolle0012.lim: [testng] 00:23:28,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:23:28,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:28,614 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-24_00-23-28.log] [testng] 00:23:28,615 |-INFO in ch.qos.logback.core.sift.SiftProcessor@289bd3ff - End of configuration. [testng] [2024-11-24 00:23:29,047] [pool-1-thread-9] Initializing /data/venu/Kontrolle0008.lim: [testng] 00:23:29,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:23:29,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:29,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-24_00-23-29.log] [testng] 00:23:29,049 |-INFO in ch.qos.logback.core.sift.SiftProcessor@346d6747 - End of configuration. [testng] [2024-11-24 00:23:29,539] [pool-1-thread-8] Initializing /data/venu/Kontrolle0021.lim: [testng] 00:23:29,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:23:29,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:29,540 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-24_00-23-29.log] [testng] 00:23:29,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fa6bb43 - End of configuration. [testng] [2024-11-24 00:23:29,918] [pool-1-thread-7] Initializing /data/venu/Kontrolle0010.lim: [testng] 00:23:29,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:23:29,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:29,920 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-24_00-23-29.log] [testng] 00:23:29,921 |-INFO in ch.qos.logback.core.sift.SiftProcessor@705c8ed6 - End of configuration. [testng] [2024-11-24 00:23:30,221] [pool-1-thread-6] Initializing /data/venu/Kontrolle0016.lim: [testng] 00:23:30,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:23:30,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:30,222 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-24_00-23-30.log] [testng] 00:23:30,223 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d3bd1f5 - End of configuration. [testng] [2024-11-24 00:23:30,588] [pool-1-thread-5] Initializing /data/venu/Kontrolle0017.lim: [testng] 00:23:30,589 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:23:30,589 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:30,589 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-24_00-23-30.log] [testng] 00:23:30,590 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d51cb2e - End of configuration. [testng] [2024-11-24 00:23:31,110] [pool-1-thread-4] Initializing /data/venu/Kontrolle0009.lim: [testng] 00:23:31,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:23:31,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:31,111 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-24_00-23-31.log] [testng] 00:23:31,112 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6afa9ab1 - End of configuration. [testng] [2024-11-24 00:23:31,564] [pool-1-thread-3] Initializing /data/venu/Kontrolle0014.lim: [testng] 00:23:31,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:23:31,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:31,565 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-24_00-23-31.log] [testng] 00:23:31,566 |-INFO in ch.qos.logback.core.sift.SiftProcessor@386870bb - End of configuration. [testng] [2024-11-24 00:23:32,045] [pool-1-thread-2] Initializing /data/venu/Kontrolle0001.lim: [testng] 00:23:32,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:23:32,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:32,046 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-24_00-23-32.log] [testng] 00:23:32,046 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a9ec837 - End of configuration. [testng] [2024-11-24 00:23:39,302] [pool-1-thread-2] Initializing /data/venu/Kontrolle0004.lim: [testng] [2024-11-24 00:23:39,753] [pool-1-thread-12] Initializing /data/venu/Kontrolle0015.lim: [testng] [2024-11-24 00:23:40,246] [pool-1-thread-8] Initializing /data/venu/Kontrolle0020.lim: [testng] [2024-11-24 00:23:40,728] [pool-1-thread-5] Initializing /data/venu/Kontrolle0013.lim: [testng] [2024-11-24 00:23:41,190] [pool-1-thread-1] Initializing /data/venu/Kontrolle0011.lim: [testng] [2024-11-24 00:23:41,663] [pool-1-thread-6] Initializing /data/venu/Kontrolle0019.lim: [testng] [2024-11-24 00:23:42,017] [pool-1-thread-9] Initializing /data/venu/Kontrolle0002.lim: [testng] [2024-11-24 00:23:42,430] [pool-1-thread-10] Initializing /data/venu/Kontrolle0018.lim: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1060, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 32 seconds Finished: SUCCESS