![[Jenkins]](/jenkins/static/695419c3/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 266 originally caused by: Started by upstream project "Trigger" build number 289 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins14693345455119679799.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_41982_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:49:53,267 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:49:53,269 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 00:49:53,269 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:49:53,270 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:49:53,270 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:49:53,271 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:49:53,271 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:49:53,271 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:49:53,271 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:49:53,272 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:49:53,272 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:49:53,273 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:49:53,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:49:53,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:49:53,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:49:53,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:49:53,489 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:49:53,489 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:49:53,489 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:49:53,489 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:49:53,490 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 00:49:53,490 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 00:49:53,490 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 219 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-24 00:49:53,500] [main] java.version = 17.0.2 [testng] 00:49:53,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:49:53,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:49:53,558 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-24_00-49-53.log] [testng] 00:49:53,560 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-11-24 00:49:53,562] [main] testng.directory = /data [testng] [2024-11-24 00:49:53,562] [main] testng.configDirectory = /config [testng] [2024-11-24 00:49:53,571] [main] testng.multiplier = 1.0 [testng] [2024-11-24 00:49:53,572] [main] testng.in-memory = false [testng] [2024-11-24 00:49:53,572] [main] testng.allow-missing = false [testng] [2024-11-24 00:49:53,572] [main] user.language = en [testng] [2024-11-24 00:49:53,572] [main] user.country = ${user.country} [testng] [2024-11-24 00:49:53,572] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-24 00:50:25,541] [main] ---------------------------------------- [testng] [2024-11-24 00:50:25,541] [main] Total files: 259 [testng] [2024-11-24 00:50:25,542] [main] Scan time: 31.969 s (123 ms/file) [testng] [2024-11-24 00:50:25,542] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-24 00:59:01,438] [pool-1-thread-1] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] 00:59:01,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:59:01,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:01,439 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-24_00-59-01.log] [testng] 00:59:01,440 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71f7ac2f - End of configuration. [testng] [2024-11-24 00:59:13,100] [pool-1-thread-12] Initializing /data/yasunori/series_1.oib: [testng] 00:59:13,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:59:13,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:13,102 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-24_00-59-13.log] [testng] 00:59:13,102 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11d9f10b - End of configuration. [testng] [2024-11-24 00:59:13,532] [pool-1-thread-11] Initializing /data/simon/never_worked.oib: [testng] 00:59:13,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:59:13,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:13,533 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-24_00-59-13.log] [testng] 00:59:13,534 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f73cf21 - End of configuration. [testng] [2024-11-24 00:59:13,872] [pool-1-thread-10] Initializing /data/satoshi/60x_5x_1.oif: [testng] 00:59:13,872 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:59:13,872 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:13,874 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-24_00-59-13.log] [testng] 00:59:13,875 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43ee698f - End of configuration. [testng] [2024-11-24 00:59:14,567] [pool-1-thread-9] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] 00:59:14,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:59:14,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:14,568 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-24_00-59-14.log] [testng] 00:59:14,569 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22c27c61 - End of configuration. [testng] [2024-11-24 00:59:14,842] [pool-1-thread-8] Initializing /data/david/Image0016.oif: [testng] 00:59:14,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:59:14,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:14,843 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-24_00-59-14.log] [testng] 00:59:14,843 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b13bd2 - End of configuration. [testng] [2024-11-24 00:59:15,313] [pool-1-thread-7] Initializing /data/brian/PA-GFP-3.oib: [testng] 00:59:15,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:59:15,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:15,314 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-24_00-59-15.log] [testng] 00:59:15,315 |-INFO in ch.qos.logback.core.sift.SiftProcessor@686787ad - End of configuration. [testng] [2024-11-24 00:59:15,869] [pool-1-thread-6] Initializing /data/stefan/cytosol_03e.oib: [testng] 00:59:15,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:59:15,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:15,870 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-24_00-59-15.log] [testng] 00:59:15,870 |-INFO in ch.qos.logback.core.sift.SiftProcessor@693e99e7 - End of configuration. [testng] [2024-11-24 00:59:16,675] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif: [testng] 00:59:16,675 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:59:16,675 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:16,676 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-24_00-59-16.log] [testng] 00:59:16,676 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21c88b86 - End of configuration. [testng] [2024-11-24 00:59:17,348] [pool-1-thread-4] Initializing /data/brian/CFP-GFP2.oib: [testng] 00:59:17,348 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:59:17,348 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:17,349 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-24_00-59-17.log] [testng] 00:59:17,349 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b40e4ec - End of configuration. [testng] [2024-11-24 00:59:17,755] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oif: [testng] 00:59:17,755 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:59:17,755 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:17,756 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-24_00-59-17.log] [testng] 00:59:17,757 |-INFO in ch.qos.logback.core.sift.SiftProcessor@255e6859 - End of configuration. [testng] [2024-11-24 00:59:21,525] [pool-1-thread-2] Initializing /data/glen/Null file/test no change.oif: [testng] 00:59:21,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:59:21,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:59:21,526 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-24_00-59-21.log] [testng] 00:59:21,527 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58ea9c89 - End of configuration. [testng] [2024-11-24 00:59:27,631] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-11-24 00:59:28,662] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-11-24 00:59:29,376] [pool-1-thread-12] Initializing /data/marc/V0606L.oib: [testng] [2024-11-24 00:59:31,370] [pool-1-thread-4] Initializing /data/molly/11OCT7.OIF: [testng] [2024-11-24 00:59:45,825] [pool-1-thread-7] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-11-24 00:59:48,876] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-11-24 00:59:53,464] [pool-1-thread-11] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-11-24 00:59:54,887] [pool-1-thread-9] Initializing /data/glen/simulstack.oib: [testng] [2024-11-24 00:59:56,248] [pool-1-thread-6] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-11-24 01:00:03,994] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-11-24 01:00:05,754] [pool-1-thread-7] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-11-24 01:00:07,691] [pool-1-thread-9] Initializing /data/marc/V0606J.oib: [testng] [2024-11-24 01:00:10,733] [pool-1-thread-2] Initializing /data/glen/simulstack.oif: [testng] [2024-11-24 01:00:13,795] [pool-1-thread-12] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-11-24 01:00:16,664] [pool-1-thread-7] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-11-24 01:00:18,180] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-11-24 01:00:28,551] [pool-1-thread-7] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-11-24 01:00:39,841] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-11-24 01:00:48,886] [pool-1-thread-8] Initializing /data/glen/singlesimul.oib: [testng] [2024-11-24 01:00:50,345] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oib: [testng] [2024-11-24 01:00:54,458] [pool-1-thread-8] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-11-24 01:00:57,682] [pool-1-thread-9] Initializing /data/allan/62909#1.oib: [testng] [2024-11-24 01:00:59,876] [pool-1-thread-8] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-11-24 01:01:03,060] [pool-1-thread-9] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-11-24 01:01:05,073] [pool-1-thread-7] Initializing /data/tom/zseries-test.oib: [testng] [2024-11-24 01:01:09,117] [pool-1-thread-8] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-11-24 01:01:11,406] [pool-1-thread-12] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-11-24 01:01:17,545] [pool-1-thread-9] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-11-24 01:01:21,359] [pool-1-thread-7] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-11-24 01:01:22,044] [pool-1-thread-8] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-11-24 01:01:23,259] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-11-24 01:01:27,667] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-11-24 01:01:28,343] [pool-1-thread-9] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-11-24 01:01:29,669] [pool-1-thread-8] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-11-24 01:01:34,349] [pool-1-thread-8] Initializing /data/molly/11OCT10.OIF: [testng] [2024-11-24 01:01:50,587] [pool-1-thread-7] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-11-24 01:01:53,336] [pool-1-thread-9] Initializing /data/molly/11OCT6.OIF: [testng] [2024-11-24 01:02:08,556] [pool-1-thread-7] Initializing /data/glen/singleseqframe.oif: [testng] [2024-11-24 01:02:14,406] [pool-1-thread-5] Initializing /data/molly/11OCT4.OIF: [testng] [2024-11-24 01:02:46,496] [pool-1-thread-10] Initializing /data/molly/11OCT8.OIF: [testng] [2024-11-24 01:03:03,798] [pool-1-thread-7] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-11-24 01:03:09,760] [pool-1-thread-7] Initializing /data/david/Image0016.oib: [testng] [2024-11-24 01:03:16,243] [pool-1-thread-7] Initializing /data/glen/singleseqline.oif: [testng] [2024-11-24 01:04:00,424] [pool-1-thread-7] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-11-24 01:04:05,261] [pool-1-thread-7] Initializing /data/aryeh/control_test.oib: [testng] [2024-11-24 01:04:37,238] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-11-24 01:04:44,271] [pool-1-thread-7] Initializing /data/jae/Image0001.oib: [testng] [2024-11-24 01:04:50,257] [pool-1-thread-7] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-11-24 01:04:58,170] [pool-1-thread-7] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-11-24 01:05:31,760] [pool-1-thread-7] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-11-24 01:05:36,546] [pool-1-thread-7] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-11-24 01:05:38,373] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-11-24 01:05:44,165] [pool-1-thread-7] Initializing /data/johannes/step5b.bmp: [testng] [2024-11-24 01:05:46,725] [pool-1-thread-7] Initializing /data/molly/11OCT9.OIF: [testng] [2024-11-24 01:08:08,501] [pool-1-thread-6] Initializing /data/johannes/step4.bmp: [testng] [2024-11-24 01:08:10,679] [pool-1-thread-6] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-11-24 01:08:15,496] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-11-24 01:08:22,043] [pool-1-thread-6] Initializing /data/tom/RGB-1.avi: [testng] [2024-11-24 01:08:26,036] [pool-1-thread-6] Initializing /data/yoshihito/XY.oif: [testng] [2024-11-24 01:08:54,498] [pool-1-thread-6] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-11-24 01:08:58,986] [pool-1-thread-6] Initializing /data/glen/4205basal106072.oif: [testng] [2024-11-24 01:16:17,540] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] [2024-11-24 01:16:26,858] [pool-1-thread-2] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-11-24 01:16:35,872] [pool-1-thread-2] Initializing /data/molly/11OCT3.OIF: [testng] [2024-11-24 01:18:35,037] [pool-1-thread-11] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-11-24 01:18:46,063] [pool-1-thread-11] Initializing /data/glen/singlesimul.oif: [testng] [2024-11-24 01:20:13,470] [pool-1-thread-11] Initializing /data/simon/used_to_work.oib: [testng] [2024-11-24 01:20:23,045] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-11-24 01:20:31,585] [pool-1-thread-11] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-11-24 01:20:41,243] [pool-1-thread-11] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-11-24 01:20:50,314] [pool-1-thread-11] Initializing /data/aryeh/1h.oib: [testng] [2024-11-24 01:21:06,280] [pool-1-thread-11] Initializing /data/glen/111407.oif: [testng] [2024-11-24 01:22:29,456] [pool-1-thread-4] Initializing /data/chris/missegragation-15.oib: [testng] [2024-11-24 01:22:37,172] [pool-1-thread-4] Initializing /data/glen/singleseqframe.oib: [testng] [2024-11-24 01:22:44,378] [pool-1-thread-4] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-11-24 01:28:06,362] [pool-1-thread-5] Initializing /data/monica/Image0056.oif: [testng] [2024-11-24 01:29:52,136] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-11-24 01:30:02,628] [pool-1-thread-5] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-11-24 01:30:12,353] [pool-1-thread-5] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-11-24 01:30:22,736] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-11-24 01:30:31,277] [pool-1-thread-5] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-11-24 01:32:40,894] [pool-1-thread-10] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-11-24 01:32:56,559] [pool-1-thread-9] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-11-24 01:33:02,298] [pool-1-thread-3] Initializing /data/christian/20min.oif: [testng] [2024-11-24 01:33:28,877] [pool-1-thread-9] Initializing /data/glen/Null file/test change.oif: [testng] [2024-11-24 01:33:32,635] [pool-1-thread-3] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-11-24 01:33:40,583] [pool-1-thread-3] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-11-24 01:34:17,642] [pool-1-thread-12] Initializing /data/glen/notsaturated.oib: [testng] [2024-11-24 01:34:26,067] [pool-1-thread-12] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-11-24 01:34:27,560] [pool-1-thread-9] Initializing /data/brian/Kaede15.oib: [testng] [2024-11-24 01:34:36,628] [pool-1-thread-9] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-11-24 01:35:13,477] [pool-1-thread-12] Initializing /data/glen/Image0002.oif: [testng] [2024-11-24 01:35:47,445] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-11-24 01:35:49,685] [pool-1-thread-5] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-11-24 01:35:56,879] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-11-24 01:36:06,451] [pool-1-thread-5] Initializing /data/brian/lambda02nm.oib: [testng] [2024-11-24 01:36:15,055] [pool-1-thread-5] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-11-24 01:36:23,910] [pool-1-thread-5] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-11-24 01:36:30,847] [pool-1-thread-5] Initializing /data/michael/CELL3.oib: [testng] [2024-11-24 01:36:36,854] [pool-1-thread-5] Initializing /data/brian/FLIP.oib: [testng] [2024-11-24 01:36:45,646] [pool-1-thread-5] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-11-24 01:36:53,135] [pool-1-thread-5] Initializing /data/johannes/step1.bmp: [testng] [2024-11-24 01:36:56,254] [pool-1-thread-5] Initializing /data/molly/11OCT5.OIF: [testng] [2024-11-24 01:37:26,456] [pool-1-thread-3] Initializing /data/glen/singleseqline.oib: [testng] [2024-11-24 01:37:33,127] [pool-1-thread-3] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-11-24 01:38:10,664] [pool-1-thread-9] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-11-24 01:38:18,593] [pool-1-thread-9] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-11-24 01:38:25,653] [pool-1-thread-9] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-11-24 01:38:35,325] [pool-1-thread-9] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-11-24 01:38:45,890] [pool-1-thread-4] Initializing /data/johannes/step4b.bmp: [testng] [2024-11-24 01:38:50,550] [pool-1-thread-4] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-11-24 01:40:02,372] [pool-1-thread-8] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-11-24 01:40:11,428] [pool-1-thread-4] Initializing /data/molly/11OCT11.OIF: [testng] [2024-11-24 01:40:36,744] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-11-24 01:40:45,969] [pool-1-thread-8] Initializing /data/karl/Image0009.oib: [testng] [2024-11-24 01:40:51,041] [pool-1-thread-8] Initializing /data/molly/11OCT2.OIF: [testng] [2024-11-24 01:42:28,313] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-11-24 01:42:35,273] [pool-1-thread-11] Initializing /data/johannes/step3.bmp: [testng] [2024-11-24 01:42:38,217] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-11-24 01:42:46,930] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-11-24 01:42:56,472] [pool-1-thread-11] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-11-24 01:43:05,237] [pool-1-thread-11] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-11-24 01:46:50,914] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-11-24 01:47:10,537] [pool-1-thread-6] Initializing /data/glen/notsaturated.oif: [testng] [2024-11-24 01:48:43,019] [pool-1-thread-10] Initializing /data/kay/IM2pg.oib: [testng] [2024-11-24 01:48:51,841] [pool-1-thread-10] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-11-24 01:49:42,169] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-11-24 01:49:52,741] [pool-1-thread-10] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-11-24 01:57:50,034] [pool-1-thread-6] Initializing /data/pedro/plv-test.oib: [testng] [2024-11-24 01:57:55,694] [pool-1-thread-6] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-11-24 01:58:05,132] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-11-24 01:58:14,243] [pool-1-thread-6] Initializing /data/johannes/step2.bmp: [testng] 02:18:26,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:18:26,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:26,133 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-24_02-18-26.log] [testng] 02:18:26,133 |-INFO in ch.qos.logback.core.sift.SiftProcessor@185539fe - End of configuration. [testng] 02:58:49,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:58:49,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:58:49,137 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-24_02-58-49.log] [testng] 02:58:49,137 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c78e1d3 - End of configuration. [testng] 03:35:17,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:35:17,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:17,956 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-24_03-35-17.log] [testng] 03:35:17,956 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e7baf3b - End of configuration. [testng] 03:42:01,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:42:01,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:42:01,442 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-24_03-42-01.log] [testng] 03:42:01,442 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f467bb9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 172 minutes 13 seconds Finished: SUCCESS