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Started by upstream project "BIOFORMATS-test-repo" build number 266
originally caused by:
 Started by upstream project "Trigger" build number 289
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins9548001519718823726.sh
+ '[' cellr = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_42090_merge_ci -v /uod/idr/repos/curated/cellr:/data -v /uod/idr-scratch/merge-ci/curated/cellr:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 05:22:18,697 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 05:22:18,699 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
   [testng] 05:22:18,699 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 05:22:18,699 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 05:22:18,700 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 05:22:18,700 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 05:22:18,701 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 05:22:18,701 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 05:22:18,701 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 05:22:18,702 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 05:22:18,702 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 05:22:18,703 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 05:22:18,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 05:22:18,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 05:22:18,872 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 05:22:18,872 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 05:22:18,877 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 05:22:18,877 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 05:22:18,877 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 05:22:18,877 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 05:22:18,877 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
   [testng] 05:22:18,878 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
   [testng] 05:22:18,878 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 177 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-24 05:22:18,887] [main] java.version = 17.0.2
   [testng] 05:22:18,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 05:22:18,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:22:18,927 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-24_05-22-18.log]
   [testng] 05:22:18,928 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
   [testng] [2024-11-24 05:22:18,930] [main] testng.directory = /data
   [testng] [2024-11-24 05:22:18,930] [main] testng.configDirectory = /config
   [testng] [2024-11-24 05:22:18,937] [main] testng.multiplier = 1.0
   [testng] [2024-11-24 05:22:18,938] [main] testng.in-memory = false
   [testng] [2024-11-24 05:22:18,938] [main] testng.allow-missing = false
   [testng] [2024-11-24 05:22:18,938] [main] user.language = en
   [testng] [2024-11-24 05:22:18,938] [main] user.country = ${user.country}
   [testng] [2024-11-24 05:22:18,939] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-11-24 05:25:01,001] [main] ----------------------------------------
   [testng] [2024-11-24 05:25:01,002] [main] Total files: 256
   [testng] [2024-11-24 05:25:01,002] [main] Scan time: 162.062 s (633 ms/file)
   [testng] [2024-11-24 05:25:01,002] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-24 05:32:40,895] [pool-1-thread-1] Initializing /data/qa-17107/LifeScienceDemo/LifeScienceDemoSTAR_d.mtb: 
   [testng] 05:32:40,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 05:32:40,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:32:40,897 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-24_05-32-40.log]
   [testng] 05:32:40,897 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58d30dba - End of configuration.
   [testng] [2024-11-24 05:32:42,070] [pool-1-thread-12] Initializing /data/viktorie/2Channels.tif: 
   [testng] 05:32:42,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 05:32:42,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:32:42,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-24_05-32-42.log]
   [testng] 05:32:42,071 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d5cddf2 - End of configuration.
   [testng] [2024-11-24 05:32:45,066] [pool-1-thread-11] Initializing /data/viktorie/test/test_d.mtb: 
   [testng] 05:32:45,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 05:32:45,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:32:45,067 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-24_05-32-45.log]
   [testng] 05:32:45,068 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7387c8c4 - End of configuration.
   [testng] [2024-11-24 05:32:46,344] [pool-1-thread-10] Initializing /data/qa-17107/plain/Plain_d.mtb: 
   [testng] 05:32:46,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 05:32:46,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:32:46,345 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-24_05-32-46.log]
   [testng] 05:32:46,345 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2575e2a2 - End of configuration.
   [testng] [2024-11-24 05:32:47,775] [pool-1-thread-9] Initializing /data/colin/08-10-09/08-10-09_d.mtb: 
   [testng] 05:32:47,775 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 05:32:47,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:32:47,776 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-24_05-32-47.log]
   [testng] 05:32:47,777 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47063cda - End of configuration.
   [testng] [2024-11-24 05:32:53,528] [pool-1-thread-8] Initializing /data/qa-17107/MaterialsDemo/MaterialsDemo_d.mtb: 
   [testng] 05:32:53,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 05:32:53,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:32:53,529 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-24_05-32-53.log]
   [testng] 05:32:53,529 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6364ee6 - End of configuration.
   [testng] [2024-11-24 05:32:55,155] [pool-1-thread-7] Initializing /data/qa-17107/example2/example2_d.mtb: 
   [testng] 05:32:55,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 05:32:55,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:32:55,156 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-24_05-32-55.log]
   [testng] 05:32:55,157 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2087252b - End of configuration.
   [testng] [2024-11-24 05:32:56,593] [pool-1-thread-6] Initializing /data/clare/set_27_on_d.mtb: 
   [testng] 05:32:56,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 05:32:56,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:32:56,594 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-24_05-32-56.log]
   [testng] 05:32:56,595 |-INFO in ch.qos.logback.core.sift.SiftProcessor@743c0e61 - End of configuration.
   [testng] [2024-11-24 05:32:58,384] [pool-1-thread-5] Initializing /data/viktorie/Structure.jpg: 
   [testng] 05:32:58,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 05:32:58,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:32:58,385 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-24_05-32-58.log]
   [testng] 05:32:58,386 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a52d55d - End of configuration.
   [testng] [2024-11-24 05:32:58,684] [pool-1-thread-4] Initializing /data/viktorie/090902/090902_d.mtb: 
   [testng] 05:32:58,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 05:32:58,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:32:58,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-24_05-32-58.log]
   [testng] 05:32:58,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@278ea1e6 - End of configuration.
   [testng] [2024-11-24 05:33:00,021] [pool-1-thread-3] Initializing /data/kees/Mariaelena_d.mtb: 
   [testng] 05:33:00,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 05:33:00,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:33:00,022 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-24_05-33-00.log]
   [testng] 05:33:00,023 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41172b18 - End of configuration.
   [testng] [2024-11-24 05:33:03,426] [pool-1-thread-2] Initializing /data/qa-6659/12-07-05/12-07-05_d.mtb: 
   [testng] 05:33:03,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 05:33:03,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:33:03,427 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-24_05-33-03.log]
   [testng] 05:33:03,427 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c1d7c01 - End of configuration.
   [testng] [2024-11-24 05:33:14,338] [pool-1-thread-5] Initializing /data/colin/07-06-21/07-06-21_d.mtb: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 14 minutes 0 seconds
Finished: SUCCESS