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Started by upstream project "BIOFORMATS-test-repo" build number 270
originally caused by:
 Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins15289457347483737058.sh
+ '[' zip = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_42618_merge_ci -v /uod/idr/repos/curated/zip:/data -v /uod/idr-scratch/merge-ci/curated/zip:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 11:39:11,901 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 11:39:11,903 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
   [testng] 11:39:11,903 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 11:39:11,904 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 11:39:11,904 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 11:39:11,904 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 11:39:11,905 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 11:39:11,905 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 11:39:11,905 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 11:39:11,905 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 11:39:11,906 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 11:39:11,906 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 11:39:12,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 11:39:12,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 11:39:12,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 11:39:12,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 11:39:12,103 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 11:39:12,103 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 11:39:12,103 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 11:39:12,104 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 11:39:12,104 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
   [testng] 11:39:12,105 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
   [testng] 11:39:12,105 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 200 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-11-27 11:39:12,113] [main] java.version = 17.0.2
   [testng] 11:39:12,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 11:39:12,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:39:12,156 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-27_11-39-12.log]
   [testng] 11:39:12,157 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
   [testng] [2024-11-27 11:39:12,159] [main] testng.directory = /data
   [testng] [2024-11-27 11:39:12,160] [main] testng.configDirectory = /config
   [testng] [2024-11-27 11:39:12,168] [main] testng.multiplier = 1.0
   [testng] [2024-11-27 11:39:12,169] [main] testng.in-memory = false
   [testng] [2024-11-27 11:39:12,169] [main] testng.allow-missing = false
   [testng] [2024-11-27 11:39:12,169] [main] user.language = en
   [testng] [2024-11-27 11:39:12,169] [main] user.country = ${user.country}
   [testng] [2024-11-27 11:39:12,169] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-11-27 11:39:12,717] [main] ----------------------------------------
   [testng] [2024-11-27 11:39:12,717] [main] Total files: 22
   [testng] [2024-11-27 11:39:12,717] [main] Scan time: 0.547 s (24 ms/file)
   [testng] [2024-11-27 11:39:12,717] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 22 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-11-27 11:42:13,547] [pool-1-thread-1] Initializing /data/imagej/fat-cells.zip: 
   [testng] 11:42:13,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 11:42:13,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:42:13,549 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-27_11-42-13.log]
   [testng] 11:42:13,549 |-INFO in ch.qos.logback.core.sift.SiftProcessor@479b0181 - End of configuration.
   [testng] [2024-11-27 11:42:20,806] [pool-1-thread-12] Initializing /data/imagej/gel-electrophoresis.zip: 
   [testng] 11:42:20,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 11:42:20,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:42:20,808 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-27_11-42-20.log]
   [testng] 11:42:20,808 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fcb720b - End of configuration.
   [testng] [2024-11-27 11:42:26,456] [pool-1-thread-11] Initializing /data/imagej/3D_Chromosome.zip: 
   [testng] 11:42:26,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 11:42:26,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:42:26,457 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-27_11-42-26.log]
   [testng] 11:42:26,458 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14905b4d - End of configuration.
   [testng] [2024-11-27 11:42:32,018] [pool-1-thread-10] Initializing /data/imagej/xrays.zip: 
   [testng] 11:42:32,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 11:42:32,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:42:32,020 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-27_11-42-32.log]
   [testng] 11:42:32,020 |-INFO in ch.qos.logback.core.sift.SiftProcessor@409059a8 - End of configuration.
   [testng] [2024-11-27 11:42:37,126] [pool-1-thread-9] Initializing /data/imagej/flybrain.zip: 
   [testng] 11:42:37,126 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 11:42:37,126 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:42:37,127 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-27_11-42-37.log]
   [testng] 11:42:37,127 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2878c1ae - End of configuration.
   [testng] [2024-11-27 11:42:52,091] [pool-1-thread-8] Initializing /data/imagej/m51.zip: 
   [testng] 11:42:52,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 11:42:52,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:42:52,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-27_11-42-52.log]
   [testng] 11:42:52,092 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58ea9c89 - End of configuration.
   [testng] [2024-11-27 11:42:56,341] [pool-1-thread-7] Initializing /data/imagej/se3.zip: 
   [testng] 11:42:56,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 11:42:56,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:42:56,342 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-27_11-42-56.log]
   [testng] 11:42:56,342 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51efdebe - End of configuration.
   [testng] [2024-11-27 11:43:07,628] [pool-1-thread-6] Initializing /data/imagej/cheetah_256_8.tif.zip: 
   [testng] 11:43:07,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 11:43:07,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:43:07,629 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-27_11-43-07.log]
   [testng] 11:43:07,629 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47b92663 - End of configuration.
   [testng] [2024-11-27 11:43:12,963] [pool-1-thread-5] Initializing /data/imagej/Rat_Hippocampal_Neuron.zip: 
   [testng] 11:43:12,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 11:43:12,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:43:12,964 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-27_11-43-12.log]
   [testng] 11:43:12,964 |-INFO in ch.qos.logback.core.sift.SiftProcessor@196ae177 - End of configuration.
   [testng] [2024-11-27 11:43:19,017] [pool-1-thread-4] Initializing /data/imagej/RatBrain.zip: 
   [testng] 11:43:19,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 11:43:19,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:43:19,018 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-27_11-43-19.log]
   [testng] 11:43:19,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58fdbaaf - End of configuration.
   [testng] [2024-11-27 11:43:23,201] [pool-1-thread-3] Initializing /data/imagej/4D-Stack(256x256x20x10).zip: 
   [testng] 11:43:23,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 11:43:23,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:43:23,202 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-27_11-43-23.log]
   [testng] 11:43:23,202 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44859c38 - End of configuration.
   [testng] [2024-11-27 11:43:36,455] [pool-1-thread-2] Initializing /data/imagej/hela-cells.zip: 
   [testng] 11:43:36,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 11:43:36,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:43:36,456 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-27_11-43-36.log]
   [testng] 11:43:36,457 |-INFO in ch.qos.logback.core.sift.SiftProcessor@88b8aa - End of configuration.
   [testng] [2024-11-27 11:44:27,642] [pool-1-thread-8] Initializing /data/samples/bat-cochlea-volume.zip: 
   [testng] [2024-11-27 11:44:34,529] [pool-1-thread-10] Initializing /data/imagej/Rat_Hippocampal_Neuron2.zip: 
   [testng] [2024-11-27 11:44:51,309] [pool-1-thread-11] Initializing /data/imagej/confocal-stack.zip: 
   [testng] [2024-11-27 11:45:05,605] [pool-1-thread-4] Initializing /data/imagej/scala-media.zip: 
   [testng] [2024-11-27 11:45:10,220] [pool-1-thread-6] Initializing /data/samples/sdub.zip: 
   [testng] [2024-11-27 11:45:30,990] [pool-1-thread-6] Initializing /data/imagej/mri-stack.zip: 
   [testng] [2024-11-27 11:45:42,143] [pool-1-thread-2] Initializing /data/imagej/blood-brain-barrier.zip: 
   [testng] [2024-11-27 11:45:55,355] [pool-1-thread-12] Initializing /data/imagej/watershed-animation.zip: 
   [testng] [2024-11-27 11:46:02,330] [pool-1-thread-5] Initializing /data/imagej/FluorescentCells.zip: 
   [testng] [2024-11-27 11:46:23,443] [pool-1-thread-4] Initializing /data/imagej/confocal-series.zip: 
Build was aborted
Calling Pipeline was cancelled
Finished: ABORTED