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Started by upstream project "BIOFORMATS-test-repo" build number 272 originally caused by: Started by upstream project "Trigger" build number 294 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins7682915487130206907.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_42807_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:22:07,048 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:22:07,050 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:22:07,050 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:07,051 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:07,051 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:22:07,051 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:22:07,051 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:22:07,051 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:07,052 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:07,052 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:22:07,052 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:22:07,052 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:22:07,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:22:07,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:22:07,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:22:07,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:22:07,343 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:22:07,343 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:22:07,343 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:22:07,344 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:22:07,344 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:22:07,345 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:22:07,345 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 293 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-29 00:22:07,355] [main] java.version = 1.8.0_342 [testng] 00:22:07,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:22:07,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:07,408 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-29_00-22-07.log] [testng] 00:22:07,410 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-11-29 00:22:07,412] [main] testng.directory = /data [testng] [2024-11-29 00:22:07,412] [main] testng.configDirectory = /config [testng] [2024-11-29 00:22:07,425] [main] testng.multiplier = 1.0 [testng] [2024-11-29 00:22:07,426] [main] testng.in-memory = false [testng] [2024-11-29 00:22:07,426] [main] testng.allow-missing = false [testng] [2024-11-29 00:22:07,426] [main] user.language = en [testng] [2024-11-29 00:22:07,426] [main] user.country = ${user.country} [testng] [2024-11-29 00:22:07,426] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-11-29 00:22:59,834] [main] ---------------------------------------- [testng] [2024-11-29 00:22:59,835] [main] Total files: 4426 [testng] [2024-11-29 00:22:59,835] [main] Scan time: 52.408 s (11 ms/file) [testng] [2024-11-29 00:22:59,835] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-29 00:34:37,016] [pool-1-thread-1] Initializing /data/lzw/Cholinergic.tif: [testng] 00:34:37,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:34:37,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:37,018 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-29_00-34-37.log] [testng] 00:34:37,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c44374a - End of configuration. [testng] [2024-11-29 00:34:37,726] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z005.tif: [testng] 00:34:37,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:34:37,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:37,727 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-29_00-34-37.log] [testng] 00:34:37,727 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c2a8b08 - End of configuration. [testng] [2024-11-29 00:34:38,456] [pool-1-thread-11] Initializing /data/samples/cielab/Ski_TC8-03_ROMM_lab.tif: [testng] 00:34:38,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:34:38,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:38,457 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-29_00-34-38.log] [testng] 00:34:38,458 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1836c585 - End of configuration. [testng] [2024-11-29 00:34:39,162] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z007.tif: [testng] 00:34:39,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:34:39,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:39,163 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-29_00-34-39.log] [testng] 00:34:39,163 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76a01ad6 - End of configuration. [testng] [2024-11-29 00:34:39,988] [pool-1-thread-9] Initializing /data/public/libtiff/jim___cg.tif: [testng] 00:34:39,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:34:39,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:39,989 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-29_00-34-39.log] [testng] 00:34:39,989 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4afa1f15 - End of configuration. [testng] [2024-11-29 00:34:40,724] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] 00:34:40,724 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:34:40,724 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:40,725 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-29_00-34-40.log] [testng] 00:34:40,726 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49b722f0 - End of configuration. [testng] [2024-11-29 00:34:41,419] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] 00:34:41,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:34:41,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:41,420 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-29_00-34-41.log] [testng] 00:34:41,420 |-INFO in ch.qos.logback.core.sift.SiftProcessor@268b5f2a - End of configuration. [testng] [2024-11-29 00:34:42,105] [pool-1-thread-6] Initializing /data/josiah/cell-Z27.C0.tiff: [testng] 00:34:42,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:34:42,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:42,106 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-29_00-34-42.log] [testng] 00:34:42,106 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3346d325 - End of configuration. [testng] [2024-11-29 00:34:42,810] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z014.tif: [testng] 00:34:42,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:34:42,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:42,811 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-29_00-34-42.log] [testng] 00:34:42,811 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3041cc5c - End of configuration. [testng] [2024-11-29 00:34:43,483] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z059.tif: [testng] 00:34:43,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:34:43,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:43,484 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-29_00-34-43.log] [testng] 00:34:43,484 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f0bdc67 - End of configuration. [testng] [2024-11-29 00:34:44,125] [pool-1-thread-3] Initializing /data/zstd-compressed/yeast.tif: [testng] 00:34:44,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:34:44,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:44,126 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-29_00-34-44.log] [testng] 00:34:44,126 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6338fd8b - End of configuration. [testng] [2024-11-29 00:34:44,833] [pool-1-thread-2] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] 00:34:44,833 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:34:44,833 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:34:44,834 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-29_00-34-44.log] [testng] 00:34:44,835 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18dce342 - End of configuration. [testng] [2024-11-29 00:34:54,960] [pool-1-thread-9] Initializing /data/damian/21m.tiff: [testng] [2024-11-29 00:34:55,818] [pool-1-thread-7] Initializing /data/josiah/cell-Z10.C0.tiff: [testng] [2024-11-29 00:34:56,559] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z037.tif: [testng] [2024-11-29 00:34:57,409] [pool-1-thread-8] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-11-29 00:34:58,649] [pool-1-thread-5] Initializing /data/josiah/cell-Z6.C1.tiff: [testng] [2024-11-29 00:34:59,736] [pool-1-thread-4] Initializing /data/damian/09m.tiff: [testng] [2024-11-29 00:35:01,000] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-11-29 00:35:02,260] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z004.tif: [testng] [2024-11-29 00:35:03,453] [pool-1-thread-3] Initializing /data/josiah/cell-Z20.C1.tiff: [testng] [2024-11-29 00:35:04,507] [pool-1-thread-1] Initializing /data/brian/CurrentSystems.tiff: [testng] [2024-11-29 00:35:05,468] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] [2024-11-29 00:35:11,758] [pool-1-thread-11] Initializing /data/misc/mri-new.mov: [testng] [2024-11-29 00:35:15,124] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-11-29 00:35:16,227] [pool-1-thread-2] Initializing /data/stephane/001_z01.tif: [testng] [2024-11-29 00:35:17,368] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z006.tif: [testng] [2024-11-29 00:35:18,811] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z044.tif: [testng] [2024-11-29 00:35:19,946] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x48.tiff: [testng] [2024-11-29 00:35:21,053] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0242.TIF: [testng] [2024-11-29 00:35:22,058] [pool-1-thread-11] Initializing /data/ascb/14312-p125A colocalization.tif: [testng] [2024-11-29 00:35:22,954] [pool-1-thread-6] Initializing /data/samples/cielab/Ski_TC8-03_sRGB.tif: [testng] [2024-11-29 00:35:23,927] [pool-1-thread-5] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-11-29 00:35:24,758] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z020.tif: [testng] [2024-11-29 00:35:25,695] [pool-1-thread-10] Initializing /data/brian/insight.tiff: [testng] [2024-11-29 00:35:26,749] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-11-29 00:35:37,327] [pool-1-thread-2] Initializing /data/josiah/cell-Z34.C0.tiff: [testng] [2024-11-29 00:35:38,565] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z018.tif: [testng] [2024-11-29 00:35:39,520] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z010.tif: [testng] [2024-11-29 00:35:40,353] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0251.TIF: [testng] [2024-11-29 00:35:41,120] [pool-1-thread-3] Initializing /data/josh/NESb_C2_TP1.tiff: [testng] [2024-11-29 00:35:42,203] [pool-1-thread-9] Initializing /data/public/condensation/A5.pattern2.tif: [testng] [2024-11-29 00:35:43,086] [pool-1-thread-5] Initializing /data/josh/NESb_C2_TP9.tiff: [testng] [2024-11-29 00:35:43,964] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z007.tif: [testng] [2024-11-29 00:35:44,758] [pool-1-thread-11] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-11-29 00:35:45,593] [pool-1-thread-7] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-11-29 00:35:46,334] [pool-1-thread-10] Initializing /data/public/libtiff/jello.tif: [testng] [2024-11-29 00:35:47,886] [pool-1-thread-6] Initializing /data/josiah/cell-Z30.C1.tiff: [testng] [2024-11-29 00:35:52,700] [pool-1-thread-2] Initializing /data/wayne/Rockies-8bit-indexed.tif: [testng] [2024-11-29 00:35:54,366] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z051.tif: [testng] [2024-11-29 00:35:55,375] [pool-1-thread-4] Initializing /data/josiah/cell-Z28.C1.tiff: [testng] [2024-11-29 00:35:56,259] [pool-1-thread-11] Initializing /data/samples/melissa/16-signed-lzw-differenced.tiff: [testng] [2024-11-29 00:35:57,114] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z025.tif: [testng] [2024-11-29 00:35:57,882] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z017.tif: [testng] [2024-11-29 00:35:58,609] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs012.TIF: [testng] [2024-11-29 00:35:59,281] [pool-1-thread-9] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-11-29 00:35:59,787] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x16.tiff: [testng] [2024-11-29 00:36:00,566] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z020.tif: [testng] [2024-11-29 00:36:01,348] [pool-1-thread-5] Initializing /data/wayne/MyoblastCells-8bit.tiff: [testng] [2024-11-29 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Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-11-29 00:45:21,686] [pool-1-thread-6] Initializing /data/caroline/1828_L2_series_1.tif: [testng] [2024-11-29 00:45:22,138] [pool-1-thread-8] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-11-29 00:45:22,513] [pool-1-thread-2] Initializing /data/josiah/cell-Z33.C0.tiff: [testng] [2024-11-29 00:45:22,879] [pool-1-thread-4] Initializing /data/julien/MarjorieCoisy1.TIF: [testng] [2024-11-29 00:45:23,170] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-11-29 00:45:23,370] [pool-1-thread-3] Initializing /data/josiah/cell-Z8.C1.tiff: [testng] [2024-11-29 00:45:23,681] [pool-1-thread-1] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-11-29 00:45:24,009] [pool-1-thread-10] Initializing /data/lzw/BoutonVsAxon.tif: [testng] [2024-11-29 00:45:24,287] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-11-29 00:45:24,531] [pool-1-thread-11] Initializing 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/data/marc/ball48_original_10x.tif: [testng] [2024-11-29 00:45:30,809] [pool-1-thread-5] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-11-29 00:45:31,873] [pool-1-thread-10] Initializing /data/damian/12m.tiff: [testng] [2024-11-29 00:45:33,400] [pool-1-thread-9] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-11-29 00:45:33,616] [pool-1-thread-12] Initializing /data/pavel/Dmel/spim.pattern: [testng] [2024-11-29 00:45:41,359] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs015.TIF: [testng] [2024-11-29 00:45:41,829] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z056.tif: [testng] [2024-11-29 00:45:42,244] [pool-1-thread-1] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-11-29 00:45:42,759] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z054.tif: [testng] [2024-11-29 00:45:43,096] [pool-1-thread-3] Initializing /data/alexa/test4.tif: [testng] [2024-11-29 00:45:43,336] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips_fourteen.tiff: [testng] [2024-11-29 00:45:43,756] [pool-1-thread-11] Initializing /data/qa-4745/LIBPB476_Figure 1_H_NA_21879.tiff: [testng] [2024-11-29 00:45:44,211] [pool-1-thread-10] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-11-29 00:45:47,217] [pool-1-thread-6] Initializing /data/qa-7589/CalGrid2.tif: [testng] [2024-11-29 00:45:47,755] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-11-29 00:45:48,249] [pool-1-thread-7] Initializing /data/big-images/2kx2k.tif: [testng] [2024-11-29 00:45:49,434] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z060.tif: [testng] [2024-11-29 00:45:49,964] [pool-1-thread-3] Initializing /data/curtis/imagesEight.tiff: [testng] [2024-11-29 00:45:50,532] [pool-1-thread-4] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-11-29 00:45:51,118] [pool-1-thread-2] Initializing /data/curtis/test4.tiff: [testng] [2024-11-29 00:45:51,601] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-11-29 00:45:51,942] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z028.tif: [testng] [2024-11-29 00:45:52,216] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0246.TIF: [testng] [2024-11-29 00:45:52,530] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x32.tiff: [testng] [2024-11-29 00:45:54,633] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z021.tif: [testng] [2024-11-29 00:45:56,243] [pool-1-thread-5] Initializing /data/darwinjob/SESSION4_Image2.tif: [testng] [2024-11-29 00:45:56,610] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-11-29 00:45:57,028] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x48.tiff: [testng] [2024-11-29 00:45:57,650] [pool-1-thread-9] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-11-29 00:45:58,110] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-11-29 00:45:58,344] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-11-29 00:45:58,473] [pool-1-thread-8] Initializing /data/josiah/cell-Z7.C0.tiff: [testng] [2024-11-29 00:45:58,617] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-11-29 00:45:58,875] [pool-1-thread-1] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-11-29 00:45:59,184] [pool-1-thread-4] Initializing /data/curtis/map/the-lazy-dog: [testng] [2024-11-29 00:46:02,126] [pool-1-thread-6] Initializing /data/ascb/CYT-146_Fader_Distribution.tif: [testng] [2024-11-29 00:46:03,748] [pool-1-thread-5] Initializing /data/ascb/FND-28a_PaladeHepatocyteLabeled_4800.tif: [testng] [2024-11-29 00:46:05,820] [pool-1-thread-11] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-11-29 00:46:06,336] [pool-1-thread-7] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-11-29 00:46:06,691] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z008.tif: [testng] [2024-11-29 00:46:06,929] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-11-29 00:46:07,193] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] [2024-11-29 00:46:07,491] [pool-1-thread-9] Initializing /data/public/condensation/A10.pattern2.tif: [testng] [2024-11-29 00:46:07,815] [pool-1-thread-8] Initializing /data/misc/9 h test.tif: [testng] [2024-11-29 00:46:07,914] [pool-1-thread-10] Initializing /data/public/cellprofiler/fruit-fly-cells/POS002.pattern/POS002.pattern: [testng] [2024-11-29 00:46:12,103] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z006.tif: [testng] [2024-11-29 00:46:13,644] [pool-1-thread-4] Initializing /data/sub-resolution/Leica-2/Leica-2-subifds.tiff: [testng] [2024-11-29 00:46:13,999] [pool-1-thread-3] Initializing /data/damian/30m.tiff: [testng] [2024-11-29 00:46:14,412] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs008.TIF: [testng] [2024-11-29 00:46:14,704] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z024.tif: [testng] [2024-11-29 00:46:15,108] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0225.TIF: [testng] [2024-11-29 00:46:17,473] [pool-1-thread-8] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-11-29 00:46:18,648] [pool-1-thread-3] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] [2024-11-29 00:46:19,127] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] [2024-11-29 00:46:19,650] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-11-29 00:46:20,188] [pool-1-thread-9] Initializing /data/misc/mri-stack.tif: [testng] [2024-11-29 00:46:20,828] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0240.TIF: [testng] [2024-11-29 00:46:21,436] [pool-1-thread-1] Initializing /data/josh/NESb_C2_TP10.tiff: [testng] [2024-11-29 00:46:23,097] [pool-1-thread-4] Initializing /data/jae/Rat_Hippocampal_Neuron.tif: [testng] [2024-11-29 00:46:23,574] [pool-1-thread-6] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 24 minutes 34 seconds Finished: SUCCESS