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Started by upstream project "BIOFORMATS-test-repo" build number 273 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins16567458816839952707.sh + '[' leica-lif = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_43118_merge_ci -v /uod/idr/repos/curated/leica-lif:/data -v /uod/idr-scratch/merge-ci/curated/leica-lif:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 12:43:19,589 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 12:43:19,590 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 12:43:19,590 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:43:19,591 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:43:19,591 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 12:43:19,591 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 12:43:19,592 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 12:43:19,592 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:43:19,592 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:43:19,592 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 12:43:19,592 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 12:43:19,592 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 12:43:19,803 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 12:43:19,803 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 12:43:19,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 12:43:19,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 12:43:19,836 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 12:43:19,836 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 12:43:19,836 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 12:43:19,836 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 12:43:19,836 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 12:43:19,837 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 12:43:19,837 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 245 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-29 12:43:19,847] [main] java.version = 1.8.0_342 [testng] 12:43:19,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 12:43:19,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:43:19,892 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-29_12-43-19.log] [testng] 12:43:19,893 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-11-29 12:43:19,895] [main] testng.directory = /data [testng] [2024-11-29 12:43:19,895] [main] testng.configDirectory = /config [testng] [2024-11-29 12:43:19,907] [main] testng.multiplier = 1.0 [testng] [2024-11-29 12:43:19,907] [main] testng.in-memory = false [testng] [2024-11-29 12:43:19,907] [main] testng.allow-missing = false [testng] [2024-11-29 12:43:19,907] [main] user.language = en [testng] [2024-11-29 12:43:19,907] [main] user.country = ${user.country} [testng] [2024-11-29 12:43:19,907] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-11-29 12:49:28,220] [main] ---------------------------------------- [testng] [2024-11-29 12:49:28,220] [main] Total files: 404 [testng] [2024-11-29 12:49:28,220] [main] Scan time: 368.313 s (911 ms/file) [testng] [2024-11-29 12:49:28,220] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 268 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-29 12:57:08,478] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y1.tif: [testng] 12:57:08,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 12:57:08,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:08,480 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-29_12-57-08.log] [testng] 12:57:08,480 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1251c76 - End of configuration. [testng] [2024-11-29 12:57:09,948] [pool-1-thread-12] Initializing /data/vytas/Experiment not horrid.lif: [testng] 12:57:09,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 12:57:09,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:09,949 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-29_12-57-09.log] [testng] 12:57:09,949 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56c1b27b - End of configuration. [testng] [2024-11-29 12:57:10,541] [pool-1-thread-11] Initializing /data/sagar/c55 scatter stage 14.lif: [testng] 12:57:10,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 12:57:10,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:10,542 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-29_12-57-10.log] [testng] 12:57:10,543 |-INFO in ch.qos.logback.core.sift.SiftProcessor@695530fd - End of configuration. [testng] [2024-11-29 12:57:10,835] [pool-1-thread-10] Initializing /data/michael/2007-01-02_scanfield_check.lif: [testng] 12:57:10,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 12:57:10,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:10,836 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-29_12-57-10.log] [testng] 12:57:10,836 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2535c01d - End of configuration. [testng] [2024-11-29 12:57:11,116] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y1.tif: [testng] 12:57:11,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 12:57:11,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:11,117 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-29_12-57-11.log] [testng] 12:57:11,117 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72a67762 - End of configuration. [testng] [2024-11-29 12:57:12,597] [pool-1-thread-8] Initializing /data/matthias/directory_tree.jpg: [testng] 12:57:12,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 12:57:12,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:12,598 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-29_12-57-12.log] [testng] 12:57:12,598 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e7cdfd1 - End of configuration. [testng] [2024-11-29 12:57:12,746] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y3.tif: [testng] 12:57:12,746 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 12:57:12,746 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:12,747 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-29_12-57-12.log] [testng] 12:57:12,747 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56e43d3f - End of configuration. [testng] [2024-11-29 12:57:14,209] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y3.tif: [testng] 12:57:14,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 12:57:14,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:14,210 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-29_12-57-14.log] [testng] 12:57:14,210 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b6ff5a - End of configuration. [testng] [2024-11-29 12:57:15,669] [pool-1-thread-5] Initializing /data/christian/20090323fluoresceinRPMI.lif: [testng] 12:57:15,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 12:57:15,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:15,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-29_12-57-15.log] [testng] 12:57:15,670 |-INFO in ch.qos.logback.core.sift.SiftProcessor@375232b6 - End of configuration. [testng] [2024-11-29 12:57:15,984] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y4.tif: [testng] 12:57:15,985 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 12:57:15,985 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:15,985 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-29_12-57-15.log] [testng] 12:57:15,985 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5abc42b2 - End of configuration. [testng] [2024-11-29 12:57:17,420] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y6.tif: [testng] 12:57:17,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 12:57:17,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:17,421 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-29_12-57-17.log] [testng] 12:57:17,421 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f43d60b - End of configuration. [testng] [2024-11-29 12:57:18,885] [pool-1-thread-2] Initializing /data/olivier/120404_Li011_200V.lif: [testng] 12:57:18,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 12:57:18,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:57:18,885 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-29_12-57-18.log] [testng] 12:57:18,886 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d5f18cc - End of configuration. [testng] [2024-11-29 12:57:23,215] [pool-1-thread-5] Initializing /data/ville/expected output.png: [testng] [2024-11-29 12:57:23,288] [pool-1-thread-2] Initializing /data/olivier/tiled/Mike.lif: [testng] [2024-11-29 12:57:23,979] [pool-1-thread-8] Initializing /data/pki/20111116preCK50.lif: [testng] [2024-11-29 12:57:25,316] [pool-1-thread-10] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order.tif: [testng] [2024-11-29 12:57:27,002] [pool-1-thread-11] Initializing /data/peter/20110916D.lif: [testng] [2024-11-29 12:57:28,717] [pool-1-thread-5] Initializing /data/fabrice/Clipboard.jpg: [testng] [2024-11-29 12:57:30,270] [pool-1-thread-12] Initializing /data/qa-16919/DM6000_colour-camera-8bit.lif: [testng] [2024-11-29 12:57:33,830] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y1.tif: [testng] [2024-11-29 12:57:35,300] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y8.tif: [testng] [2024-11-29 12:57:36,782] [pool-1-thread-1] Initializing /data/fabrice/new/Experiment.lif: [testng] [2024-11-29 12:57:37,127] [pool-1-thread-6] Initializing /data/alex/2010-11-29-test-for-OME.lif: [testng] [2024-11-29 12:57:37,510] [pool-1-thread-3] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP000_1um.png: [testng] [2024-11-29 12:57:37,559] [pool-1-thread-4] Initializing /data/martin/sample files.lif: [testng] [2024-11-29 12:57:37,904] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y8.tif: [testng] [2024-11-29 12:57:39,415] [pool-1-thread-2] Initializing /data/oliver/Single Channel Measurements.lif: [testng] [2024-11-29 12:57:41,063] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y2.tif: [testng] [2024-11-29 12:57:43,594] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y3.tif: [testng] [2024-11-29 12:57:45,387] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y9.tif: [testng] [2024-11-29 12:57:47,571] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y8.tif: [testng] [2024-11-29 12:57:49,297] [pool-1-thread-10] Initializing /data/kristine/Kristine.lif: [testng] [2024-11-29 12:57:50,923] [pool-1-thread-12] Initializing /data/jerome/E346_268_cutceaf.lif: [testng] [2024-11-29 12:57:51,426] [pool-1-thread-4] Initializing /data/jcb/JCB 201203109/FIG 2D STAT3-EYFP CNTF.lif: [testng] [2024-11-29 12:57:53,045] [pool-1-thread-2] Initializing /data/christophe/01_4C1Z.lif: [testng] [2024-11-29 12:57:55,146] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y1.tif: [testng] [2024-11-29 12:57:56,779] [pool-1-thread-5] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch1.avi: [testng] [2024-11-29 12:57:57,179] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y4.tif: [testng] [2024-11-29 12:57:58,842] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y6.tif: [testng] [2024-11-29 12:58:00,604] [pool-1-thread-8] Initializing /data/martin-hoehne/Niere-Schnitt-GFP-dTomato.lif: [testng] [2024-11-29 12:58:01,039] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y7.tif: [testng] [2024-11-29 12:58:02,620] [pool-1-thread-1] Initializing /data/stefan/p24b-v1240.lif: [testng] [2024-11-29 12:58:02,996] [pool-1-thread-10] Initializing /data/tony/Celegeansexp01.lif: [testng] [2024-11-29 12:58:04,484] [pool-1-thread-2] Initializing /data/jcb/JCB 201112145/Figure 3A.lif: [testng] [2024-11-29 12:58:05,413] [pool-1-thread-5] Initializing /data/andrew/Snapshots_150908.lif: [testng] [2024-11-29 12:58:07,175] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y4.tif: [testng] [2024-11-29 12:58:08,791] [pool-1-thread-6] Initializing /data/dirk/Mag-test.lif: [testng] [2024-11-29 12:58:09,875] [pool-1-thread-2] Initializing /data/stefan/p24_dfc.lif: [testng] [2024-11-29 12:58:10,688] [pool-1-thread-12] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch1.avi: [testng] [2024-11-29 12:58:11,695] [pool-1-thread-10] Initializing /data/oliver/Multi-channel Measurements.lif: [testng] [2024-11-29 12:58:12,101] [pool-1-thread-8] Initializing /data/jcb/Figure 1A.lif: [testng] [2024-11-29 12:58:12,564] [pool-1-thread-9] Initializing /data/andrew/LIF Lambda/Image J Grab.tiff: [testng] [2024-11-29 12:58:15,062] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y7.tif: [testng] [2024-11-29 12:58:16,748] [pool-1-thread-4] Initializing /data/martin/110921 Goedele.lif: [testng] [2024-11-29 12:58:17,460] [pool-1-thread-7] Initializing /data/melissa/roi-test-1.xml: [testng] [2024-11-29 12:58:17,805] [pool-1-thread-5] Initializing /data/melissa/roi-test-1.lif: [testng] [2024-11-29 12:58:18,090] [pool-1-thread-2] Initializing /data/andrew/FRAP_Test_250708.lif: [testng] [2024-11-29 12:58:18,468] [pool-1-thread-3] Initializing 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[testng] [2024-11-29 13:01:02,992] [pool-1-thread-11] Initializing /data/qa-10980/Day 2 Chitin Kan.lif: [testng] [2024-11-29 13:01:05,744] [pool-1-thread-12] Initializing /data/matthias/ms-beats.lif: [testng] [2024-11-29 13:01:06,157] [pool-1-thread-7] Initializing /data/vytas/20x deconvol demo.lif: [testng] [2024-11-29 13:01:06,962] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y7.tif: [testng] [2024-11-29 13:01:08,845] [pool-1-thread-6] Initializing /data/vytas/2014/2nd MeBl30 200MEA plus bkpmp end.lif: [testng] [2024-11-29 13:01:11,195] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y3.tif: [testng] [2024-11-29 13:01:12,685] [pool-1-thread-2] Initializing /data/andrew/SP5 FRAP/ROI data.jpg: [testng] [2024-11-29 13:01:13,653] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y0.tif: [testng] [2024-11-29 13:01:15,138] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y7.tif: [testng] 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13:01:30,255] [pool-1-thread-9] Initializing /data/christophe/test_greys.lif: [testng] [2024-11-29 13:01:30,663] [pool-1-thread-12] Initializing /data/stephen/Timelapse of RG An embryos.lif: [testng] [2024-11-29 13:01:33,228] [pool-1-thread-5] Initializing /data/sebastian/sebHaase.lif: [testng] [2024-11-29 13:01:33,575] [pool-1-thread-10] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Wrong Order Merge.avi: [testng] [2024-11-29 13:01:34,393] [pool-1-thread-9] Initializing /data/vytas/B6 mo2 g9c8 act tc DiD 20mil 24hrs after inj rbc DiI.lif: [testng] [2024-11-29 13:01:36,293] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y2.tif: [testng] [2024-11-29 13:01:38,543] [pool-1-thread-11] Initializing /data/andrew/SP5 FRAP/220311 FRAP YFP test.lif: [testng] [2024-11-29 13:01:38,927] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y0.tif: [testng] [2024-11-29 13:01:40,496] [pool-1-thread-12] Initializing 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Initializing /data/claude/Short_1A.lif: [testng] [2024-11-29 13:01:51,126] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y8.tif: [testng] [2024-11-29 13:01:52,798] [pool-1-thread-12] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP003_10um.png: [testng] [2024-11-29 13:01:55,424] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y8.tif: [testng] [2024-11-29 13:02:01,011] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y3.tif: [testng] [2024-11-29 13:02:03,103] [pool-1-thread-6] Initializing /data/vytas/Series008_t000_ch00.tif: [testng] [2024-11-29 13:02:05,818] [pool-1-thread-2] Initializing /data/qa-7273/5-17 Hypoxia.lif: [testng] [2024-11-29 13:02:06,272] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y9.tif: [testng] [2024-11-29 13:02:09,452] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y6.tif: [testng] [2024-11-29 13:02:10,935] [pool-1-thread-5] Initializing /data/fabrice/Clipboard-1.jpg: [testng] [2024-11-29 13:02:11,076] [pool-1-thread-7] Initializing /data/mario/2007-11-12_L15_AF001.lif: [testng] [2024-11-29 13:02:11,860] [pool-1-thread-11] Initializing /data/olivier/tiled/bob.lif: [testng] [2024-11-29 13:02:12,784] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y4.tif: [testng] [2024-11-29 13:02:15,968] [pool-1-thread-5] Initializing /data/christian/20090323illutest_BFmisaligned.lif: [testng] [2024-11-29 13:02:17,582] [pool-1-thread-7] Initializing /data/vytas/Experiment2.lif: [testng] [2024-11-29 13:02:19,095] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y6.tif: [testng] [2024-11-29 13:02:21,808] [pool-1-thread-5] Initializing /data/lance/Beta Catenin.lif: [testng] [2024-11-29 13:02:24,305] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y5.tif: [testng] [2024-11-29 13:02:26,091] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y5.tif: [testng] [2024-11-29 13:02:28,027] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y2.tif: [testng] [2024-11-29 13:02:29,718] [pool-1-thread-9] Initializing /data/jcb/201007044/Figure 4C - F505.lif: [testng] [2024-11-29 13:02:30,080] [pool-1-thread-1] Initializing /data/mark/Leica_FRAP_1channel_noZ-stack.lif: [testng] [2024-11-29 13:02:30,771] [pool-1-thread-10] Initializing /data/vytas/Experimenttest2.lif: [testng] [2024-11-29 13:02:32,381] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y2.tif: [testng] [2024-11-29 13:02:35,020] [pool-1-thread-9] Initializing /data/chris/free edge 6.lif: [testng] [2024-11-29 13:02:36,035] [pool-1-thread-1] Initializing /data/stefan/spe.lif: [testng] [2024-11-29 13:02:37,124] [pool-1-thread-10] Initializing /data/stefan/spe.tif: [testng] [2024-11-29 13:02:40,067] [pool-1-thread-12] Initializing /data/fabrice/09-10-23 Tete de mouche.lif: [testng] [2024-11-29 13:02:41,404] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y0.tif: [testng] [2024-11-29 13:02:44,895] [pool-1-thread-12] Initializing /data/stefan/Experiment.lif: [testng] [2024-11-29 13:02:45,484] [pool-1-thread-8] Initializing /data/jcb/JCB 201112145/Figure 5A.lif: [testng] [2024-11-29 13:02:45,844] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y1.tif: [testng] [2024-11-29 13:02:47,557] [pool-1-thread-2] Initializing /data/melissa/Series001_z1.tif: [testng] [2024-11-29 13:02:49,776] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y7.tif: [testng] [2024-11-29 13:02:51,759] [pool-1-thread-5] Initializing /data/andrew/FRAP_Test_12-0808.lif: [testng] [2024-11-29 13:02:54,083] [pool-1-thread-8] Initializing /data/chris/kees_friday2.lif: [testng] [2024-11-29 13:02:54,671] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y5.tif: [testng] [2024-11-29 13:02:56,370] [pool-1-thread-10] Initializing /data/claude/4B.lif: [testng] [2024-11-29 13:02:58,988] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y9.tif: [testng] [2024-11-29 13:03:01,394] [pool-1-thread-5] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch3.avi: [testng] [2024-11-29 13:03:02,351] [pool-1-thread-1] Initializing /data/vytas/030510-esxA-mCherry 3.lif: [testng] [2024-11-29 13:03:04,603] [pool-1-thread-7] Initializing /data/alexander/20120224.lif: [testng] [2024-11-29 13:03:05,050] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y4.tif: [testng] [2024-11-29 13:03:06,960] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y5.tif: [testng] [2024-11-29 13:03:09,797] [pool-1-thread-9] Initializing /data/vytas/LIFtest.lif: [testng] [2024-11-29 13:03:12,477] [pool-1-thread-3] Initializing /data/romain/merge 002.lif: [testng] [2024-11-29 13:03:12,919] [pool-1-thread-7] Initializing /data/tommaso/Midollo GFAP 27.10.10 OXA+PEA 40x.lif: [testng] [2024-11-29 13:03:13,450] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y9.tif: [testng] [2024-11-29 13:03:15,426] [pool-1-thread-9] Initializing /data/olivier/STAGE CONFIG1.lif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 14204, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 21 minutes 42 seconds Finished: SUCCESS