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Started by upstream project "BIOFORMATS-test-repo" build number 275 originally caused by: Started by upstream project "Trigger" build number 296 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins1621930917763181477.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_43290_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:21:12,251 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:21:12,252 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 00:21:12,252 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:12,253 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:12,253 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:21:12,254 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:21:12,254 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:21:12,254 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:12,254 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:12,255 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:21:12,255 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:21:12,255 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:21:12,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:21:12,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:21:12,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:21:12,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:21:12,448 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:21:12,448 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:21:12,448 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:21:12,449 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:21:12,449 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 00:21:12,450 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 00:21:12,450 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 196 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-01 00:21:12,458] [main] java.version = 17.0.2 [testng] 00:21:12,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:21:12,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:12,504 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-01_00-21-12.log] [testng] 00:21:12,505 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-12-01 00:21:12,507] [main] testng.directory = /data [testng] [2024-12-01 00:21:12,507] [main] testng.configDirectory = /config [testng] [2024-12-01 00:21:12,516] [main] testng.multiplier = 1.0 [testng] [2024-12-01 00:21:12,517] [main] testng.in-memory = false [testng] [2024-12-01 00:21:12,517] [main] testng.allow-missing = false [testng] [2024-12-01 00:21:12,517] [main] user.language = en [testng] [2024-12-01 00:21:12,517] [main] user.country = ${user.country} [testng] [2024-12-01 00:21:12,517] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-01 00:21:14,756] [main] ---------------------------------------- [testng] [2024-12-01 00:21:14,756] [main] Total files: 103 [testng] [2024-12-01 00:21:14,756] [main] Scan time: 2.239 s (21 ms/file) [testng] [2024-12-01 00:21:14,756] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-01 00:21:37,569] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] 00:21:37,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:21:37,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:37,571 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-01_00-21-37.log] [testng] 00:21:37,572 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1080a043 - End of configuration. [testng] [2024-12-01 00:21:38,447] [pool-1-thread-12] Initializing /data/melissa/annotation-test.tif: [testng] 00:21:38,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:21:38,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:38,449 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-01_00-21-38.log] [testng] 00:21:38,449 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14f9ca33 - End of configuration. [testng] [2024-12-01 00:21:39,346] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] 00:21:39,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:21:39,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:39,347 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-01_00-21-39.log] [testng] 00:21:39,348 |-INFO in ch.qos.logback.core.sift.SiftProcessor@758ea281 - End of configuration. [testng] [2024-12-01 00:21:39,489] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] 00:21:39,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:21:39,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:39,490 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-01_00-21-39.log] [testng] 00:21:39,490 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2193dbbe - End of configuration. [testng] [2024-12-01 00:21:39,651] [pool-1-thread-9] Initializing /data/jay/dnasample1.dm3: [testng] 00:21:39,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:21:39,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:39,652 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-01_00-21-39.log] [testng] 00:21:39,653 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d06f91a - End of configuration. [testng] [2024-12-01 00:21:39,796] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] 00:21:39,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:21:39,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:39,797 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-01_00-21-39.log] [testng] 00:21:39,797 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e524c1a - End of configuration. [testng] [2024-12-01 00:21:40,817] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] 00:21:40,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:21:40,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:40,818 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-01_00-21-40.log] [testng] 00:21:40,818 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c4eaf3e - End of configuration. [testng] [2024-12-01 00:21:40,953] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] 00:21:40,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:21:40,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:40,954 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-01_00-21-40.log] [testng] 00:21:40,954 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5305c501 - End of configuration. [testng] [2024-12-01 00:21:41,151] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] 00:21:41,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:21:41,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:41,152 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-01_00-21-41.log] [testng] 00:21:41,153 |-INFO in ch.qos.logback.core.sift.SiftProcessor@789cbae1 - End of configuration. [testng] [2024-12-01 00:21:42,087] [pool-1-thread-4] Initializing /data/ofra/lowloss.dm3: [testng] 00:21:42,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:21:42,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:42,087 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-01_00-21-42.log] [testng] 00:21:42,088 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71ffcdda - End of configuration. [testng] [2024-12-01 00:21:42,212] [pool-1-thread-3] Initializing /data/jay/biosamplefullframe.dm3: [testng] 00:21:42,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:21:42,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:42,213 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-01_00-21-42.log] [testng] 00:21:42,213 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5858e507 - End of configuration. [testng] [2024-12-01 00:21:42,348] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] 00:21:42,348 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:21:42,348 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:42,349 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-01_00-21-42.log] [testng] 00:21:42,349 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15d1621 - End of configuration. [testng] [2024-12-01 00:21:45,912] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-12-01 00:21:47,439] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-12-01 00:21:47,585] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-12-01 00:21:48,084] [pool-1-thread-3] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-12-01 00:21:48,271] [pool-1-thread-9] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-12-01 00:21:48,521] [pool-1-thread-7] Initializing /data/jay/DMtest2.dm3: [testng] [2024-12-01 00:21:48,970] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-12-01 00:21:51,670] [pool-1-thread-12] Initializing /data/jay/camtest1.dm3: [testng] [2024-12-01 00:21:51,808] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-12-01 00:21:51,988] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-12-01 00:21:52,116] [pool-1-thread-8] Initializing /data/jay/dnasample.tif: [testng] [2024-12-01 00:21:53,554] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-12-01 00:21:55,560] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-12-01 00:21:55,732] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-12-01 00:21:59,259] [pool-1-thread-11] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-12-01 00:21:59,480] [pool-1-thread-7] Initializing /data/qa-7642/8.dm4: [testng] [2024-12-01 00:21:59,848] [pool-1-thread-9] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-12-01 00:22:00,600] [pool-1-thread-12] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-12-01 00:22:02,768] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-12-01 00:22:02,971] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-12-01 00:22:04,610] [pool-1-thread-2] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-12-01 00:22:04,786] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-12-01 00:22:05,272] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-12-01 00:22:05,586] [pool-1-thread-10] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-12-01 00:22:05,748] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-12-01 00:22:06,830] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-12-01 00:22:07,492] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-12-01 00:22:08,790] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-12-01 00:22:10,166] [pool-1-thread-6] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-12-01 00:22:10,508] [pool-1-thread-5] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-12-01 00:22:10,757] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-12-01 00:22:12,163] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-12-01 00:22:12,313] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-12-01 00:22:12,498] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-12-01 00:22:13,307] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-12-01 00:22:14,556] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-12-01 00:22:14,803] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-12-01 00:22:15,547] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-12-01 00:22:17,354] [pool-1-thread-12] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-12-01 00:22:18,422] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-12-01 00:22:19,567] [pool-1-thread-4] Initializing /data/qa-21761/example.dm4: [testng] [2024-12-01 00:22:19,931] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-12-01 00:22:20,142] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-12-01 00:22:20,365] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-12-01 00:22:22,737] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-12-01 00:22:23,819] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-12-01 00:22:23,980] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-12-01 00:22:24,183] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-12-01 00:22:24,706] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-12-01 00:22:25,778] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-12-01 00:22:26,327] [pool-1-thread-8] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-12-01 00:22:26,794] [pool-1-thread-12] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-12-01 00:22:27,102] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-12-01 00:22:27,594] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-12-01 00:22:28,289] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-12-01 00:22:28,460] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-12-01 00:22:28,648] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-12-01 00:22:29,246] [pool-1-thread-11] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-12-01 00:22:30,293] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-12-01 00:22:30,611] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-12-01 00:22:30,773] [pool-1-thread-7] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-12-01 00:22:30,930] [pool-1-thread-5] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-12-01 00:22:31,975] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-12-01 00:22:32,299] [pool-1-thread-9] Initializing /data/samples/test-tiles.dm3: [testng] [2024-12-01 00:22:32,664] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-12-01 00:22:32,863] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-12-01 00:22:33,173] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-12-01 00:22:33,375] [pool-1-thread-1] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-12-01 00:22:33,861] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-12-01 00:22:34,311] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-12-01 00:22:34,734] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-12-01 00:22:35,275] [pool-1-thread-8] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-12-01 00:22:35,617] [pool-1-thread-4] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-12-01 00:22:36,264] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-12-01 00:22:36,464] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-12-01 00:22:37,475] [pool-1-thread-10] Initializing /data/jay/smallerfile.dm3: [testng] [2024-12-01 00:22:38,052] [pool-1-thread-7] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-12-01 00:22:38,230] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-12-01 00:22:39,497] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-12-01 00:22:39,899] [pool-1-thread-9] Initializing /data/jay/DMtest.dm3: [testng] [2024-12-01 00:22:40,804] [pool-1-thread-10] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-12-01 00:22:42,423] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-12-01 00:22:42,598] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-12-01 00:22:42,762] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-12-01 00:22:42,931] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-12-01 00:22:44,142] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 50 seconds Finished: SUCCESS