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Started by upstream project "BIOFORMATS-test-repo" build number 275 originally caused by: Started by upstream project "Trigger" build number 296 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins8500070494898304803.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_43329_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:42:39,314 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:42:39,315 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 00:42:39,315 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:42:39,316 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:42:39,316 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:42:39,316 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:42:39,317 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:42:39,317 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:42:39,317 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:42:39,318 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:42:39,318 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:42:39,318 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:42:39,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:42:39,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:42:39,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:42:39,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:42:39,533 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:42:39,533 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:42:39,533 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:42:39,534 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:42:39,534 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 00:42:39,535 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 00:42:39,535 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 218 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-01 00:42:39,544] [main] java.version = 17.0.2 [testng] 00:42:39,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:42:39,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:42:39,592 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-01_00-42-39.log] [testng] 00:42:39,593 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-12-01 00:42:39,596] [main] testng.directory = /data [testng] [2024-12-01 00:42:39,596] [main] testng.configDirectory = /config [testng] [2024-12-01 00:42:39,606] [main] testng.multiplier = 1.0 [testng] [2024-12-01 00:42:39,607] [main] testng.in-memory = false [testng] [2024-12-01 00:42:39,607] [main] testng.allow-missing = false [testng] [2024-12-01 00:42:39,607] [main] user.language = en [testng] [2024-12-01 00:42:39,607] [main] user.country = ${user.country} [testng] [2024-12-01 00:42:39,607] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-01 00:42:52,083] [main] ---------------------------------------- [testng] [2024-12-01 00:42:52,083] [main] Total files: 259 [testng] [2024-12-01 00:42:52,083] [main] Scan time: 12.476 s (48 ms/file) [testng] [2024-12-01 00:42:52,083] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-01 00:48:21,323] [pool-1-thread-1] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] 00:48:21,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:48:21,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:21,325 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-01_00-48-21.log] [testng] 00:48:21,325 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51ffba93 - End of configuration. [testng] [2024-12-01 00:48:27,011] [pool-1-thread-12] Initializing /data/yasunori/series_1.oib: [testng] 00:48:27,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:48:27,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:27,012 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-01_00-48-27.log] [testng] 00:48:27,013 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42344517 - End of configuration. [testng] [2024-12-01 00:48:27,324] [pool-1-thread-11] Initializing /data/simon/never_worked.oib: [testng] 00:48:27,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:48:27,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:27,325 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-01_00-48-27.log] [testng] 00:48:27,326 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12e898bc - End of configuration. [testng] [2024-12-01 00:48:27,541] [pool-1-thread-10] Initializing /data/satoshi/60x_5x_1.oif: [testng] 00:48:27,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:48:27,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:27,542 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-01_00-48-27.log] [testng] 00:48:27,542 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35dffa3d - End of configuration. [testng] [2024-12-01 00:48:27,951] [pool-1-thread-9] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] 00:48:27,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:48:27,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:27,952 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-01_00-48-27.log] [testng] 00:48:27,952 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fcb720b - End of configuration. [testng] [2024-12-01 00:48:28,120] [pool-1-thread-8] Initializing /data/david/Image0016.oif: [testng] 00:48:28,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:48:28,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:28,121 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-01_00-48-28.log] [testng] 00:48:28,121 |-INFO in ch.qos.logback.core.sift.SiftProcessor@85ea298 - End of configuration. [testng] [2024-12-01 00:48:28,354] [pool-1-thread-7] Initializing /data/brian/PA-GFP-3.oib: [testng] 00:48:28,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:48:28,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:28,355 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-01_00-48-28.log] [testng] 00:48:28,356 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39d07b87 - End of configuration. [testng] [2024-12-01 00:48:28,750] [pool-1-thread-6] Initializing /data/stefan/cytosol_03e.oib: [testng] 00:48:28,750 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:48:28,750 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:28,751 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-01_00-48-28.log] [testng] 00:48:28,751 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5af2dfdf - End of configuration. [testng] [2024-12-01 00:48:29,433] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif: [testng] 00:48:29,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:48:29,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:29,434 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-01_00-48-29.log] [testng] 00:48:29,434 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65af82f8 - End of configuration. [testng] [2024-12-01 00:48:29,686] [pool-1-thread-4] Initializing /data/brian/CFP-GFP2.oib: [testng] 00:48:29,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:48:29,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:29,687 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-01_00-48-29.log] [testng] 00:48:29,688 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bbd8a9e - End of configuration. [testng] [2024-12-01 00:48:29,957] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oif: [testng] 00:48:29,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:48:29,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:29,958 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-01_00-48-29.log] [testng] 00:48:29,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a87b0b0 - End of configuration. [testng] [2024-12-01 00:48:31,073] [pool-1-thread-2] Initializing /data/glen/Null file/test no change.oif: [testng] 00:48:31,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:48:31,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:31,074 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-01_00-48-31.log] [testng] 00:48:31,074 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47b92663 - End of configuration. [testng] [2024-12-01 00:48:34,415] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-01 00:48:34,881] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-01 00:48:35,354] [pool-1-thread-4] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-01 00:48:40,824] [pool-1-thread-12] Initializing /data/marc/V0606L.oib: [testng] [2024-12-01 00:48:42,451] [pool-1-thread-7] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-01 00:48:43,994] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-12-01 00:48:46,569] [pool-1-thread-11] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-01 00:48:47,688] [pool-1-thread-9] Initializing /data/glen/simulstack.oib: [testng] [2024-12-01 00:48:50,364] [pool-1-thread-6] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-01 00:48:51,648] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-12-01 00:48:52,753] [pool-1-thread-9] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-12-01 00:48:56,081] [pool-1-thread-2] Initializing /data/marc/V0606J.oib: [testng] [2024-12-01 00:48:57,707] [pool-1-thread-7] Initializing /data/glen/simulstack.oif: [testng] [2024-12-01 00:48:59,577] [pool-1-thread-12] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-12-01 00:49:00,510] [pool-1-thread-9] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-01 00:49:01,303] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-01 00:49:04,471] [pool-1-thread-9] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-12-01 00:49:09,596] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-01 00:49:13,962] [pool-1-thread-8] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-01 00:49:16,112] [pool-1-thread-8] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-01 00:49:18,015] [pool-1-thread-2] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-12-01 00:49:20,016] [pool-1-thread-12] Initializing /data/allan/62909#1.oib: [testng] [2024-12-01 00:49:21,375] [pool-1-thread-8] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-12-01 00:49:22,301] [pool-1-thread-2] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-01 00:49:23,308] [pool-1-thread-12] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-01 00:49:26,088] [pool-1-thread-8] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-12-01 00:49:26,910] [pool-1-thread-2] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-12-01 00:49:32,509] [pool-1-thread-12] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-01 00:49:33,313] [pool-1-thread-8] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-01 00:49:36,096] [pool-1-thread-12] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-01 00:49:37,149] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-01 00:49:38,031] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-12-01 00:49:39,987] [pool-1-thread-12] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-12-01 00:49:41,207] [pool-1-thread-8] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-01 00:49:41,804] [pool-1-thread-9] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-01 00:49:51,624] [pool-1-thread-8] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-01 00:49:53,656] [pool-1-thread-5] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-01 00:50:00,384] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-01 00:50:01,444] [pool-1-thread-8] Initializing /data/molly/11OCT4.OIF: [testng] [2024-12-01 00:50:11,304] [pool-1-thread-10] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-01 00:50:27,076] [pool-1-thread-12] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-01 00:50:30,119] [pool-1-thread-12] Initializing /data/david/Image0016.oib: [testng] [2024-12-01 00:50:32,599] [pool-1-thread-12] Initializing /data/glen/singleseqline.oif: [testng] [2024-12-01 00:50:54,072] [pool-1-thread-12] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-01 00:50:56,547] [pool-1-thread-12] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-01 00:51:22,463] [pool-1-thread-12] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-12-01 00:51:26,902] [pool-1-thread-12] Initializing /data/jae/Image0001.oib: [testng] [2024-12-01 00:51:31,626] [pool-1-thread-12] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-01 00:51:37,020] [pool-1-thread-12] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-12-01 00:51:55,809] [pool-1-thread-12] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-12-01 00:51:58,247] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-12-01 00:51:59,089] [pool-1-thread-12] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-12-01 00:52:01,813] [pool-1-thread-12] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-01 00:52:03,441] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-01 00:52:37,593] [pool-1-thread-6] Initializing /data/johannes/step4.bmp: [testng] [2024-12-01 00:52:39,238] [pool-1-thread-6] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-12-01 00:52:41,998] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-12-01 00:52:47,199] [pool-1-thread-6] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-01 00:52:49,467] [pool-1-thread-6] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-01 00:53:06,667] [pool-1-thread-6] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-01 00:53:12,220] [pool-1-thread-6] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-01 00:58:08,351] [pool-1-thread-7] Initializing /data/sten/01.oib: [testng] [2024-12-01 00:58:12,389] [pool-1-thread-7] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-01 00:58:15,975] [pool-1-thread-7] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-01 00:59:20,642] [pool-1-thread-11] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-12-01 00:59:24,034] [pool-1-thread-11] Initializing /data/glen/singlesimul.oif: [testng] [2024-12-01 00:59:54,018] [pool-1-thread-11] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-01 00:59:59,476] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-12-01 01:00:03,375] [pool-1-thread-11] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-12-01 01:00:07,329] [pool-1-thread-11] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-12-01 01:00:10,689] [pool-1-thread-11] Initializing /data/aryeh/1h.oib: [testng] [2024-12-01 01:00:18,171] [pool-1-thread-11] Initializing /data/glen/111407.oif: [testng] [2024-12-01 01:00:38,407] [pool-1-thread-4] Initializing /data/chris/missegragation-15.oib: [testng] [2024-12-01 01:00:42,742] [pool-1-thread-4] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-01 01:00:45,782] [pool-1-thread-4] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-12-01 01:02:56,331] [pool-1-thread-8] Initializing /data/monica/Image0056.oif: [testng] [2024-12-01 01:03:34,983] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-01 01:03:39,213] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-01 01:03:43,816] [pool-1-thread-8] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-12-01 01:03:49,947] [pool-1-thread-8] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-01 01:03:54,629] [pool-1-thread-8] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-01 01:04:45,834] [pool-1-thread-3] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-01 01:05:01,677] [pool-1-thread-10] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-12-01 01:05:33,498] [pool-1-thread-10] Initializing /data/christian/20min.oif: [testng] [2024-12-01 01:05:36,693] [pool-1-thread-5] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-01 01:05:57,000] [pool-1-thread-10] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-01 01:06:02,715] [pool-1-thread-10] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-01 01:06:13,031] [pool-1-thread-5] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-01 01:06:13,996] [pool-1-thread-2] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-01 01:06:21,546] [pool-1-thread-5] Initializing /data/brian/Kaede15.oib: [testng] [2024-12-01 01:06:28,206] [pool-1-thread-5] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-01 01:06:45,300] [pool-1-thread-2] Initializing /data/glen/Image0002.oif: [testng] [2024-12-01 01:07:22,640] [pool-1-thread-8] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-12-01 01:07:24,608] [pool-1-thread-8] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-01 01:07:29,666] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-01 01:07:35,427] [pool-1-thread-8] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-01 01:07:40,009] [pool-1-thread-8] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-12-01 01:07:45,232] [pool-1-thread-8] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-12-01 01:07:49,619] [pool-1-thread-8] Initializing /data/michael/CELL3.oib: [testng] [2024-12-01 01:07:53,002] [pool-1-thread-8] Initializing /data/brian/FLIP.oib: [testng] [2024-12-01 01:07:58,529] [pool-1-thread-8] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-01 01:08:03,406] [pool-1-thread-10] Initializing /data/johannes/step1.bmp: [testng] [2024-12-01 01:08:03,772] [pool-1-thread-8] Initializing /data/molly/11OCT5.OIF: [testng] [2024-12-01 01:08:15,963] [pool-1-thread-10] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-01 01:08:19,392] [pool-1-thread-10] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-12-01 01:08:30,701] [pool-1-thread-5] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-01 01:08:35,540] [pool-1-thread-5] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-12-01 01:08:36,825] [pool-1-thread-4] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-01 01:08:39,863] [pool-1-thread-5] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-12-01 01:08:45,783] [pool-1-thread-4] Initializing /data/johannes/step4b.bmp: [testng] [2024-12-01 01:08:47,596] [pool-1-thread-4] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-01 01:09:20,594] [pool-1-thread-9] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-01 01:09:26,361] [pool-1-thread-4] Initializing /data/molly/11OCT11.OIF: [testng] [2024-12-01 01:09:37,473] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-01 01:09:42,762] [pool-1-thread-9] Initializing /data/karl/Image0009.oib: [testng] [2024-12-01 01:09:46,069] [pool-1-thread-9] Initializing /data/molly/11OCT2.OIF: [testng] [2024-12-01 01:10:49,792] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-12-01 01:10:54,060] [pool-1-thread-11] Initializing /data/johannes/step3.bmp: [testng] [2024-12-01 01:10:55,979] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-01 01:11:01,335] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-12-01 01:11:06,691] [pool-1-thread-11] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-01 01:11:11,452] [pool-1-thread-11] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-12-01 01:12:22,357] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-01 01:12:29,265] [pool-1-thread-3] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-01 01:12:32,729] [pool-1-thread-6] Initializing /data/kay/IM2pg.oib: [testng] [2024-12-01 01:12:39,106] [pool-1-thread-6] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-12-01 01:13:03,897] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-12-01 01:13:09,111] [pool-1-thread-6] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-12-01 01:18:33,103] [pool-1-thread-3] Initializing /data/pedro/plv-test.oib: [testng] [2024-12-01 01:18:37,650] [pool-1-thread-3] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-01 01:18:44,139] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-12-01 01:18:50,207] [pool-1-thread-3] Initializing /data/johannes/step2.bmp: [testng] 02:27:07,046 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:27:07,046 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:07,047 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-01_02-27-07.log] [testng] 02:27:07,048 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f467bb9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 104 minutes 32 seconds Finished: SUCCESS