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Started by upstream project "BIOFORMATS-test-repo" build number 276 originally caused by: Started by upstream project "Trigger" build number 297 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins17985605245090720266.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_43454_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:23:04,132 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:23:04,134 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:23:04,134 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:23:04,135 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:23:04,136 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:23:04,136 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:23:04,136 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:23:04,136 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:23:04,137 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:23:04,137 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:23:04,137 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:23:04,137 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:23:04,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:23:04,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:23:04,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:23:04,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:23:04,410 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:23:04,411 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:23:04,411 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:23:04,411 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:23:04,411 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:23:04,412 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:23:04,412 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 275 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-02 00:23:04,422] [main] java.version = 1.8.0_342 [testng] 00:23:04,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:23:04,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:04,472 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-02_00-23-04.log] [testng] 00:23:04,473 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-02 00:23:04,475] [main] testng.directory = /data [testng] [2024-12-02 00:23:04,475] [main] testng.configDirectory = /config [testng] [2024-12-02 00:23:04,487] [main] testng.multiplier = 1.0 [testng] [2024-12-02 00:23:04,487] [main] testng.in-memory = false [testng] [2024-12-02 00:23:04,487] [main] testng.allow-missing = false [testng] [2024-12-02 00:23:04,487] [main] user.language = fr [testng] [2024-12-02 00:23:04,487] [main] user.country = FR [testng] [2024-12-02 00:23:04,487] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-02 00:23:06,791] [main] ---------------------------------------- [testng] [2024-12-02 00:23:06,792] [main] Total files: 103 [testng] [2024-12-02 00:23:06,792] [main] Scan time: 2.304 s (22 ms/file) [testng] [2024-12-02 00:23:06,792] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-02 00:23:23,188] [pool-1-thread-1] Initializing /data/melissa/annotation-test.dm3: [testng] 00:23:23,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:23:23,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:23,189 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-02_00-23-23.log] [testng] 00:23:23,190 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a693b7e - End of configuration. [testng] [2024-12-02 00:23:23,315] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] 00:23:23,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:23:23,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:23,316 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-02_00-23-23.log] [testng] 00:23:23,317 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cea1120 - End of configuration. [testng] [2024-12-02 00:23:24,163] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] 00:23:24,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:23:24,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:24,165 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-02_00-23-24.log] [testng] 00:23:24,165 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31c04c41 - End of configuration. [testng] [2024-12-02 00:23:24,290] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] 00:23:24,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:23:24,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:24,291 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-02_00-23-24.log] [testng] 00:23:24,292 |-INFO in ch.qos.logback.core.sift.SiftProcessor@404ac25c - End of configuration. [testng] [2024-12-02 00:23:25,209] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] 00:23:25,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:23:25,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:25,210 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-02_00-23-25.log] [testng] 00:23:25,210 |-INFO in ch.qos.logback.core.sift.SiftProcessor@112323ba - End of configuration. [testng] [2024-12-02 00:23:25,357] [pool-1-thread-8] Initializing /data/jay/camtest1.dm3: [testng] 00:23:25,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:23:25,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:25,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-02_00-23-25.log] [testng] 00:23:25,358 |-INFO in ch.qos.logback.core.sift.SiftProcessor@390dce37 - End of configuration. [testng] [2024-12-02 00:23:25,507] [pool-1-thread-7] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 00:23:25,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:23:25,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:25,508 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-02_00-23-25.log] [testng] 00:23:25,509 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b5c3b20 - End of configuration. [testng] [2024-12-02 00:23:25,684] [pool-1-thread-6] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] 00:23:25,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:23:25,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:25,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-02_00-23-25.log] [testng] 00:23:25,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@698b11a1 - End of configuration. [testng] [2024-12-02 00:23:26,017] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] 00:23:26,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:23:26,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:26,018 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-02_00-23-26.log] [testng] 00:23:26,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@121eacae - End of configuration. [testng] [2024-12-02 00:23:26,135] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] 00:23:26,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:23:26,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:26,135 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-02_00-23-26.log] [testng] 00:23:26,136 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17d3e13f - End of configuration. [testng] [2024-12-02 00:23:26,254] [pool-1-thread-3] Initializing /data/qa-21761/example.dm4: [testng] 00:23:26,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:23:26,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:26,254 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-02_00-23-26.log] [testng] 00:23:26,255 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5497356e - End of configuration. [testng] [2024-12-02 00:23:26,363] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] 00:23:26,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:23:26,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:23:26,364 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-02_00-23-26.log] [testng] 00:23:26,364 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56e9fb5a - End of configuration. [testng] [2024-12-02 00:23:30,452] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-12-02 00:23:31,478] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-12-02 00:23:31,609] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-12-02 00:23:32,073] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-12-02 00:23:32,387] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-12-02 00:23:32,714] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-12-02 00:23:34,052] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-12-02 00:23:34,406] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-12-02 00:23:34,868] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-12-02 00:23:36,096] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-12-02 00:23:36,475] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-12-02 00:23:37,481] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-12-02 00:23:38,299] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-12-02 00:23:38,587] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-12-02 00:23:38,779] [pool-1-thread-2] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-12-02 00:23:39,910] [pool-1-thread-3] Initializing /data/jay/dnasample1.dm3: [testng] [2024-12-02 00:23:40,695] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-12-02 00:23:40,825] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-12-02 00:23:40,983] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-12-02 00:23:41,610] [pool-1-thread-12] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-12-02 00:23:42,774] [pool-1-thread-2] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-12-02 00:23:44,361] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-12-02 00:23:44,518] [pool-1-thread-11] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-12-02 00:23:46,105] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-12-02 00:23:46,288] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-12-02 00:23:46,459] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-12-02 00:23:46,617] [pool-1-thread-6] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-12-02 00:23:47,894] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-12-02 00:23:48,622] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-12-02 00:23:49,267] [pool-1-thread-9] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-12-02 00:23:51,520] [pool-1-thread-7] Initializing /data/ofra/lowloss.dm3: [testng] [2024-12-02 00:23:51,688] [pool-1-thread-3] Initializing /data/jay/smallerfile.dm3: [testng] [2024-12-02 00:23:51,973] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-12-02 00:23:53,188] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-12-02 00:23:53,568] [pool-1-thread-9] Initializing /data/melissa/annotation-test.tif: [testng] [2024-12-02 00:23:54,600] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-12-02 00:23:55,654] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-12-02 00:23:55,952] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-12-02 00:23:56,354] [pool-1-thread-3] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-12-02 00:23:57,164] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-12-02 00:23:58,574] [pool-1-thread-12] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-12-02 00:23:59,858] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-12-02 00:24:00,870] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-12-02 00:24:01,104] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-12-02 00:24:01,402] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-12-02 00:24:02,472] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-12-02 00:24:02,688] [pool-1-thread-5] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-12-02 00:24:03,459] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-12-02 00:24:04,110] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-12-02 00:24:04,832] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-12-02 00:24:05,676] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-12-02 00:24:06,082] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-12-02 00:24:07,453] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-12-02 00:24:08,314] [pool-1-thread-11] Initializing /data/jay/DMtest2.dm3: [testng] [2024-12-02 00:24:08,470] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-12-02 00:24:09,106] [pool-1-thread-2] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-12-02 00:24:10,069] [pool-1-thread-9] Initializing /data/samples/test-tiles.dm3: [testng] [2024-12-02 00:24:10,364] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-12-02 00:24:10,537] [pool-1-thread-12] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-12-02 00:24:11,729] [pool-1-thread-7] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-12-02 00:24:13,264] [pool-1-thread-9] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-12-02 00:24:13,490] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-12-02 00:24:15,629] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-12-02 00:24:15,800] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-12-02 00:24:16,367] [pool-1-thread-11] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-12-02 00:24:16,977] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-12-02 00:24:17,979] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-12-02 00:24:18,297] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-12-02 00:24:19,784] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-12-02 00:24:19,966] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-12-02 00:24:21,440] [pool-1-thread-9] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-12-02 00:24:23,284] [pool-1-thread-10] Initializing /data/jay/dnasample.tif: [testng] [2024-12-02 00:24:24,409] [pool-1-thread-6] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-12-02 00:24:24,613] [pool-1-thread-11] Initializing /data/jay/DMtest.dm3: [testng] [2024-12-02 00:24:25,342] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-12-02 00:24:26,226] [pool-1-thread-12] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-12-02 00:24:26,414] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-12-02 00:24:28,005] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-12-02 00:24:29,128] [pool-1-thread-5] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-12-02 00:24:29,611] [pool-1-thread-4] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-12-02 00:24:30,002] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-12-02 00:24:31,292] [pool-1-thread-7] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-12-02 00:24:31,664] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-12-02 00:24:32,236] [pool-1-thread-4] Initializing /data/qa-7642/8.dm4: [testng] [2024-12-02 00:24:32,658] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-12-02 00:24:32,838] [pool-1-thread-11] Initializing /data/jay/biosamplefullframetif.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 41 seconds Finished: SUCCESS