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Started by upstream project "BIOFORMATS-test-repo" build number 277 originally caused by: Started by upstream project "Trigger" build number 298 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins5305732630334405760.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_43744_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 03:21:29,196 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:21:29,198 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 03:21:29,198 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:21:29,199 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:21:29,199 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:21:29,199 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:21:29,200 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:21:29,200 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:21:29,200 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:21:29,201 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:21:29,201 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:21:29,201 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:21:29,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:21:29,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:21:29,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:21:29,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:21:29,396 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:21:29,397 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:21:29,397 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:21:29,397 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:21:29,397 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 03:21:29,398 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 03:21:29,398 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 198 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-03 03:21:29,407] [main] java.version = 11.0.16 [testng] 03:21:29,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:21:29,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:29,451 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-03_03-21-29.log] [testng] 03:21:29,453 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-12-03 03:21:29,455] [main] testng.directory = /data [testng] [2024-12-03 03:21:29,455] [main] testng.configDirectory = /config [testng] [2024-12-03 03:21:29,464] [main] testng.multiplier = 1.0 [testng] [2024-12-03 03:21:29,465] [main] testng.in-memory = false [testng] [2024-12-03 03:21:29,465] [main] testng.allow-missing = false [testng] [2024-12-03 03:21:29,465] [main] user.language = en [testng] [2024-12-03 03:21:29,465] [main] user.country = ${user.country} [testng] [2024-12-03 03:21:29,465] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-03 03:22:29,364] [main] ---------------------------------------- [testng] [2024-12-03 03:22:29,365] [main] Total files: 15735 [testng] [2024-12-03 03:22:29,365] [main] Scan time: 59.899 s (3 ms/file) [testng] [2024-12-03 03:22:29,365] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-03 03:23:36,617] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 03:23:36,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:23:36,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:36,619 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-03_03-23-36.log] [testng] 03:23:36,620 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e92fe28 - End of configuration. [testng] [2024-12-03 03:23:36,966] [pool-1-thread-12] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 03:23:36,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:23:36,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:36,968 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-03_03-23-36.log] [testng] 03:23:36,968 |-INFO in ch.qos.logback.core.sift.SiftProcessor@653aac24 - End of configuration. [testng] [2024-12-03 03:23:37,325] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 03:23:37,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:23:37,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:37,326 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-03_03-23-37.log] [testng] 03:23:37,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1db12736 - End of configuration. [testng] [2024-12-03 03:23:37,770] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 03:23:37,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:23:37,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:37,771 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-03_03-23-37.log] [testng] 03:23:37,771 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c0f3ee3 - End of configuration. [testng] [2024-12-03 03:23:38,169] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] 03:23:38,169 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:23:38,169 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:38,170 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-03_03-23-38.log] [testng] 03:23:38,170 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56d5249b - End of configuration. [testng] [2024-12-03 03:23:38,499] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] 03:23:38,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:23:38,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:38,500 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-03_03-23-38.log] [testng] 03:23:38,500 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3324f5ef - End of configuration. [testng] [2024-12-03 03:23:39,028] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] 03:23:39,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:23:39,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:39,028 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-03_03-23-39.log] [testng] 03:23:39,029 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f2dafcd - End of configuration. [testng] [2024-12-03 03:23:39,489] [pool-1-thread-6] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 03:23:39,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:23:39,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:39,490 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-03_03-23-39.log] [testng] 03:23:39,490 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2238fbb7 - End of configuration. [testng] [2024-12-03 03:23:39,824] [pool-1-thread-5] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 03:23:39,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:23:39,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:39,824 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-03_03-23-39.log] [testng] 03:23:39,825 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798c22f - End of configuration. [testng] [2024-12-03 03:23:40,474] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] 03:23:40,474 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:23:40,474 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:40,475 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-03_03-23-40.log] [testng] 03:23:40,476 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37af3e16 - End of configuration. [testng] [2024-12-03 03:23:41,011] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] 03:23:41,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:23:41,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:41,011 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-03_03-23-41.log] [testng] 03:23:41,012 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29d92183 - End of configuration. [testng] [2024-12-03 03:23:41,355] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] 03:23:41,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:23:41,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:41,355 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-03_03-23-41.log] [testng] 03:23:41,356 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f2d62c8 - End of configuration. [testng] [2024-12-03 03:23:53,715] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-12-03 03:23:56,630] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-12-03 03:23:57,427] [pool-1-thread-10] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-12-03 03:23:58,480] [pool-1-thread-3] Initializing /data/converted/michel/d.tif: [testng] [2024-12-03 03:23:59,526] [pool-1-thread-6] Initializing /data/scott/Slide133-08.tif: [testng] [2024-12-03 03:24:00,216] [pool-1-thread-12] Initializing /data/converted/nicolas/image.tif: [testng] [2024-12-03 03:24:12,205] [pool-1-thread-12] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-12-03 03:24:16,397] [pool-1-thread-6] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-12-03 03:24:17,207] [pool-1-thread-3] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-12-03 03:24:28,005] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-12-03 03:24:30,181] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-12-03 03:24:34,538] [pool-1-thread-6] Initializing /data/converted/sebastien/test.tif: [testng] [2024-12-03 03:25:34,381] [pool-1-thread-9] Initializing /data/scott/Slide133-04.tif: [testng] [2024-12-03 03:25:40,323] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-12-03 03:25:55,567] [pool-1-thread-9] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-12-03 03:26:02,710] [pool-1-thread-9] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-12-03 03:27:20,762] [pool-1-thread-9] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-12-03 03:27:41,371] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-12-03 03:27:58,528] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-12-03 03:28:00,155] [pool-1-thread-1] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-12-03 03:28:03,467] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-12-03 03:28:08,541] [pool-1-thread-7] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-12-03 03:28:11,273] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-12-03 03:28:16,470] [pool-1-thread-1] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-12-03 03:28:36,779] [pool-1-thread-7] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-12-03 03:28:39,111] [pool-1-thread-3] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-12-03 03:28:52,942] [pool-1-thread-7] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-12-03 03:28:59,808] [pool-1-thread-10] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-12-03 03:29:10,138] [pool-1-thread-3] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-12-03 03:29:14,281] [pool-1-thread-10] Initializing /data/othmar/mozaic.tif: [testng] [2024-12-03 03:29:15,756] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-12-03 03:29:21,190] [pool-1-thread-2] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-12-03 03:29:31,439] [pool-1-thread-3] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-12-03 03:29:36,946] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-12-03 03:29:38,998] [pool-1-thread-6] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-12-03 03:30:08,405] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-12-03 03:30:21,112] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-12-03 03:30:48,964] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-12-03 03:31:16,386] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-12-03 03:31:43,221] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-12-03 03:32:13,420] [pool-1-thread-1] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-12-03 03:33:11,793] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-12-03 03:33:26,945] [pool-1-thread-10] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-12-03 03:35:30,774] [pool-1-thread-9] Initializing /data/converted/michel/e.tif: [testng] [2024-12-03 03:36:16,675] [pool-1-thread-8] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-12-03 03:36:20,506] [pool-1-thread-1] Initializing /data/converted/michel/b.tif: [testng] [2024-12-03 03:36:30,354] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-12-03 03:37:00,675] [pool-1-thread-1] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-12-03 03:37:45,047] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-12-03 03:38:22,796] [pool-1-thread-4] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-12-03 03:39:05,187] [pool-1-thread-4] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-12-03 03:39:34,762] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-12-03 03:39:39,181] [pool-1-thread-2] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-12-03 03:40:11,059] [pool-1-thread-6] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-12-03 03:40:54,898] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-12-03 03:41:00,361] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-12-03 03:41:11,994] [pool-1-thread-11] Initializing /data/converted/dietmar/138.tif: [testng] [2024-12-03 03:42:17,503] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-12-03 03:42:46,627] [pool-1-thread-8] Initializing /data/scott/Slide133-11.tif: [testng] [2024-12-03 03:43:11,657] [pool-1-thread-8] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-12-03 03:43:31,304] [pool-1-thread-6] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-12-03 03:43:36,643] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-12-03 03:44:45,997] [pool-1-thread-1] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-12-03 03:46:41,336] [pool-1-thread-4] Initializing /data/converted/michel/a.tif: [testng] [2024-12-03 03:47:02,979] [pool-1-thread-4] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-12-03 03:47:56,027] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-12-03 03:48:26,131] [pool-1-thread-1] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-12-03 03:48:32,045] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-12-03 03:48:46,602] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-12-03 03:48:51,863] [pool-1-thread-1] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-12-03 03:52:50,490] [pool-1-thread-1] Initializing /data/converted/converted/damian.tif: [testng] [2024-12-03 03:53:23,442] [pool-1-thread-1] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-12-03 03:54:14,978] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-12-03 03:54:32,479] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif: [testng] [2024-12-03 03:55:38,067] [pool-1-thread-5] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-12-03 03:55:58,178] [pool-1-thread-7] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-12-03 03:56:09,759] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-12-03 03:56:49,750] [pool-1-thread-9] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-12-03 03:56:54,159] [pool-1-thread-12] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-12-03 03:57:18,265] [pool-1-thread-9] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-12-03 03:57:22,673] [pool-1-thread-12] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-12-03 03:57:24,830] [pool-1-thread-11] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-12-03 03:57:58,318] [pool-1-thread-9] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-12-03 03:58:15,384] [pool-1-thread-8] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-12-03 03:58:22,414] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-12-03 03:58:43,401] [pool-1-thread-11] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-12-03 04:00:18,096] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-12-03 04:01:46,526] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-12-03 04:02:34,357] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-12-03 04:04:01,277] [pool-1-thread-4] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-12-03 04:04:04,204] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-12-03 04:04:19,185] [pool-1-thread-5] Initializing /data/converted/michel/c.tif: [testng] [2024-12-03 04:05:00,624] [pool-1-thread-5] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-12-03 04:05:38,559] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-12-03 04:05:53,136] [pool-1-thread-2] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-12-03 04:06:38,061] [pool-1-thread-8] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-12-03 04:06:52,642] [pool-1-thread-12] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-12-03 04:07:33,307] [pool-1-thread-12] Initializing /data/scott/Slide133-01.tif: [testng] [2024-12-03 04:07:59,436] [pool-1-thread-2] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-12-03 04:08:05,526] [pool-1-thread-12] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-12-03 04:08:09,430] [pool-1-thread-9] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-12-03 04:08:38,106] [pool-1-thread-12] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-12-03 04:08:48,581] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-12-03 04:10:14,533] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-12-03 04:10:45,466] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-12-03 04:11:41,679] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-12-03 04:11:54,616] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-12-03 04:14:03,407] [pool-1-thread-5] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-12-03 04:18:51,915] [pool-1-thread-6] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-12-03 04:18:59,206] [pool-1-thread-2] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-12-03 04:19:18,765] [pool-1-thread-6] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-12-03 04:19:22,325] [pool-1-thread-2] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-12-03 04:19:50,294] [pool-1-thread-1] Initializing /data/converted/stephan/notok2.tif: [testng] 04:54:30,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:54:30,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:54:30,263 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-03_04-54-30.log] [testng] 04:54:30,263 |-INFO in ch.qos.logback.core.sift.SiftProcessor@223b5a02 - End of configuration. [testng] 04:57:23,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:57:23,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:57:23,918 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-03_04-57-23.log] [testng] 04:57:23,919 |-INFO in ch.qos.logback.core.sift.SiftProcessor@188f626a - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 96 minutes 1 second Finished: SUCCESS