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Started by upstream project "BIOFORMATS-test-repo" build number 279
originally caused by:
 Started by upstream project "Trigger" build number 299
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins18141214393008344171.sh
+ '[' psd = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_44076_merge_ci -v /uod/idr/repos/curated/psd:/data -v /uod/idr-scratch/merge-ci/curated/psd:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 03:11:49,923 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 03:11:49,925 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
   [testng] 03:11:49,925 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:11:49,926 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:11:49,926 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 03:11:49,926 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 03:11:49,927 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 03:11:49,927 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:11:49,927 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:11:49,928 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 03:11:49,928 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 03:11:49,928 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 03:11:50,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 03:11:50,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 03:11:50,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 03:11:50,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 03:11:50,129 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 03:11:50,129 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 03:11:50,129 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 03:11:50,130 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 03:11:50,130 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
   [testng] 03:11:50,131 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
   [testng] 03:11:50,131 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 204 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-12-04 03:11:50,140] [main] java.version = 17.0.2
   [testng] 03:11:50,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 03:11:50,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:50,184 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-04_03-11-50.log]
   [testng] 03:11:50,186 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
   [testng] [2024-12-04 03:11:50,188] [main] testng.directory = /data
   [testng] [2024-12-04 03:11:50,188] [main] testng.configDirectory = /config
   [testng] [2024-12-04 03:11:50,197] [main] testng.multiplier = 1.0
   [testng] [2024-12-04 03:11:50,198] [main] testng.in-memory = false
   [testng] [2024-12-04 03:11:50,198] [main] testng.allow-missing = false
   [testng] [2024-12-04 03:11:50,198] [main] user.language = en
   [testng] [2024-12-04 03:11:50,198] [main] user.country = ${user.country}
   [testng] [2024-12-04 03:11:50,198] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-12-04 03:11:50,898] [main] ----------------------------------------
   [testng] [2024-12-04 03:11:50,898] [main] Total files: 18
   [testng] [2024-12-04 03:11:50,899] [main] Scan time: 0.7 s (38 ms/file)
   [testng] [2024-12-04 03:11:50,899] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 18 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-12-04 03:11:56,086] [pool-1-thread-1] Initializing /data/ascb/607x.psd: 
   [testng] 03:11:56,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 03:11:56,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:56,088 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-04_03-11-56.log]
   [testng] 03:11:56,088 |-INFO in ch.qos.logback.core.sift.SiftProcessor@178fdc9c - End of configuration.
   [testng] [2024-12-04 03:11:56,327] [pool-1-thread-12] Initializing /data/misc/venus_composite_8bit.psd: 
   [testng] 03:11:56,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 03:11:56,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:56,328 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-04_03-11-56.log]
   [testng] 03:11:56,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72e2cb2a - End of configuration.
   [testng] [2024-12-04 03:11:56,639] [pool-1-thread-11] Initializing /data/jcb/Fig5A_siHP16h.tif: 
   [testng] 03:11:56,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 03:11:56,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:56,644 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-04_03-11-56.log]
   [testng] 03:11:56,645 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47017ed0 - End of configuration.
   [testng] [2024-12-04 03:11:56,890] [pool-1-thread-10] Initializing /data/misc/vig_drawing_1.psd: 
   [testng] 03:11:56,890 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 03:11:56,890 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:56,891 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-04_03-11-56.log]
   [testng] 03:11:56,891 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a8bea6f - End of configuration.
   [testng] [2024-12-04 03:11:57,099] [pool-1-thread-9] Initializing /data/misc/glossy_buttons.psd: 
   [testng] 03:11:57,099 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 03:11:57,099 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:57,100 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-04_03-11-57.log]
   [testng] 03:11:57,100 |-INFO in ch.qos.logback.core.sift.SiftProcessor@380b8202 - End of configuration.
   [testng] [2024-12-04 03:11:57,310] [pool-1-thread-8] Initializing /data/cris/house.tif: 
   [testng] 03:11:57,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 03:11:57,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:57,311 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-04_03-11-57.log]
   [testng] 03:11:57,312 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cc3d36e - End of configuration.
   [testng] [2024-12-04 03:11:58,046] [pool-1-thread-7] Initializing /data/jcb/Fig5A_sip1506h.tif: 
   [testng] 03:11:58,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 03:11:58,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:58,047 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-04_03-11-58.log]
   [testng] 03:11:58,048 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c311bb3 - End of configuration.
   [testng] [2024-12-04 03:11:58,268] [pool-1-thread-6] Initializing /data/big-images/8kx8k.psd: 
   [testng] 03:11:58,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 03:11:58,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:58,269 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-04_03-11-58.log]
   [testng] 03:11:58,270 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6df5ad27 - End of configuration.
   [testng] [2024-12-04 03:11:58,493] [pool-1-thread-5] Initializing /data/misc/venus_composite.psd: 
   [testng] 03:11:58,494 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 03:11:58,494 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:58,494 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-04_03-11-58.log]
   [testng] 03:11:58,495 |-INFO in ch.qos.logback.core.sift.SiftProcessor@99aaa86 - End of configuration.
   [testng] [2024-12-04 03:11:58,712] [pool-1-thread-4] Initializing /data/simon/colour_separated_image.psd: 
   [testng] 03:11:58,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 03:11:58,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:58,713 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-04_03-11-58.log]
   [testng] 03:11:58,713 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26587460 - End of configuration.
   [testng] [2024-12-04 03:11:58,924] [pool-1-thread-3] Initializing /data/misc/smilie.psd: 
   [testng] 03:11:58,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 03:11:58,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:58,925 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-04_03-11-58.log]
   [testng] 03:11:58,925 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2825e4ae - End of configuration.
   [testng] [2024-12-04 03:11:59,118] [pool-1-thread-2] Initializing /data/qa-4117/caspase gel-1.psd: 
   [testng] 03:11:59,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 03:11:59,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:11:59,119 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-04_03-11-59.log]
   [testng] 03:11:59,120 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1149438 - End of configuration.
   [testng] [2024-12-04 03:12:02,530] [pool-1-thread-4] Initializing /data/qa-7632/23283078__NA_NA_27343.psd: 
   [testng] [2024-12-04 03:12:02,718] [pool-1-thread-9] Initializing /data/ascb/423.psd: 
   [testng] [2024-12-04 03:12:02,942] [pool-1-thread-3] Initializing /data/qa-4497/22421435_Supl Fig 4_C_Flag_12987.psd: 
   [testng] [2024-12-04 03:12:03,246] [pool-1-thread-10] Initializing /data/ascb/thin&thick fill.2.psd: 
   [testng] [2024-12-04 03:12:03,623] [pool-1-thread-5] Initializing /data/jcb/Fig5A_sicont6h.tif: 
   [testng] [2024-12-04 03:12:03,874] [pool-1-thread-11] Initializing /data/misc/glossy_orbs.psd: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 954, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 34 seconds
Finished: SUCCESS