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Started by upstream project "BIOFORMATS-test-repo" build number 280 originally caused by: Started by upstream project "Trigger" build number 300 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins4303347480243058769.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_44149_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:51:37,641 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:51:37,642 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 00:51:37,642 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:51:37,643 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:51:37,644 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:51:37,644 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:51:37,644 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:51:37,644 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:51:37,645 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:51:37,645 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:51:37,645 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:51:37,646 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:51:37,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:51:37,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:51:37,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:51:37,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:51:37,831 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:51:37,831 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:51:37,831 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:51:37,832 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:51:37,832 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 00:51:37,832 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 00:51:37,832 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 187 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-05 00:51:37,841] [main] java.version = 21 [testng] 00:51:37,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:51:37,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:51:37,884 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-05_00-51-37.log] [testng] 00:51:37,885 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-12-05 00:51:37,886] [main] testng.directory = /data [testng] [2024-12-05 00:51:37,887] [main] testng.configDirectory = /config [testng] [2024-12-05 00:51:37,895] [main] testng.multiplier = 1.0 [testng] [2024-12-05 00:51:37,895] [main] testng.in-memory = false [testng] [2024-12-05 00:51:37,895] [main] testng.allow-missing = false [testng] [2024-12-05 00:51:37,896] [main] user.language = en [testng] [2024-12-05 00:51:37,896] [main] user.country = ${user.country} [testng] [2024-12-05 00:51:37,896] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-05 00:52:09,688] [main] ---------------------------------------- [testng] [2024-12-05 00:52:09,688] [main] Total files: 259 [testng] [2024-12-05 00:52:09,688] [main] Scan time: 31.792 s (122 ms/file) [testng] [2024-12-05 00:52:09,688] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-05 01:00:15,581] [pool-1-thread-1] Initializing /data/molly/11OCT2.OIF: [testng] 01:00:15,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:00:15,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:15,583 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-05_01-00-15.log] [testng] 01:00:15,584 |-INFO in ch.qos.logback.core.sift.SiftProcessor@410f1f88 - End of configuration. [testng] [2024-12-05 01:00:18,864] [pool-1-thread-12] Initializing /data/kay/IM2pg.oib: [testng] 01:00:18,864 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:00:18,864 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:18,865 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-05_01-00-18.log] [testng] 01:00:18,866 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d1eaea3 - End of configuration. [testng] [2024-12-05 01:00:19,123] [pool-1-thread-11] Initializing /data/johannes/step2.bmp: [testng] 01:00:19,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:00:19,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:19,124 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-05_01-00-19.log] [testng] 01:00:19,124 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10ddc54a - End of configuration. [testng] [2024-12-05 01:00:19,144] [pool-1-thread-10] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] 01:00:19,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:00:19,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:19,145 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-05_01-00-19.log] [testng] 01:00:19,145 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78733ad1 - End of configuration. [testng] [2024-12-05 01:00:19,361] [pool-1-thread-9] Initializing /data/chris/missegragation-15.oib: [testng] 01:00:19,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:00:19,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:19,361 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-05_01-00-19.log] [testng] 01:00:19,362 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d557241 - End of configuration. [testng] [2024-12-05 01:00:19,463] [pool-1-thread-8] Initializing /data/aryeh/1h_after_pdt.oib: [testng] 01:00:19,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:00:19,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:19,464 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-05_01-00-19.log] [testng] 01:00:19,464 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e480bb4 - End of configuration. [testng] [2024-12-05 01:00:21,634] [pool-1-thread-7] Initializing /data/allan/new_30min3_1z2.oib: [testng] 01:00:21,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:00:21,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:21,635 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-05_01-00-21.log] [testng] 01:00:21,636 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d727ce8 - End of configuration. [testng] [2024-12-05 01:00:22,205] [pool-1-thread-6] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] 01:00:22,205 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:00:22,205 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:22,206 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-05_01-00-22.log] [testng] 01:00:22,207 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e5dcf46 - End of configuration. [testng] [2024-12-05 01:00:22,421] [pool-1-thread-5] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 01:00:22,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:00:22,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:22,422 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-05_01-00-22.log] [testng] 01:00:22,423 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75efce7 - End of configuration. [testng] [2024-12-05 01:00:22,576] [pool-1-thread-4] Initializing /data/stefan/cytosol_01a.oif: [testng] 01:00:22,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:00:22,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:22,577 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-05_01-00-22.log] [testng] 01:00:22,577 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1286aed8 - End of configuration. [testng] [2024-12-05 01:00:44,130] [pool-1-thread-3] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 01:00:44,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:00:44,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:44,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-05_01-00-44.log] [testng] 01:00:44,131 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a6c22e5 - End of configuration. [testng] [2024-12-05 01:00:44,550] [pool-1-thread-2] Initializing /data/glen/LUT issue/60x11.oif: [testng] 01:00:44,550 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:00:44,550 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:44,551 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-05_01-00-44.log] [testng] 01:00:44,551 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e519c94 - End of configuration. [testng] [2024-12-05 01:00:48,732] [pool-1-thread-11] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-12-05 01:00:53,239] [pool-1-thread-9] Initializing /data/aryeh/1h.oib: [testng] [2024-12-05 01:00:54,509] [pool-1-thread-7] Initializing /data/david/Image0016.oib: [testng] [2024-12-05 01:00:54,944] [pool-1-thread-6] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-12-05 01:00:55,475] [pool-1-thread-12] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-05 01:00:55,987] [pool-1-thread-10] Initializing /data/johannes/step4b.bmp: [testng] [2024-12-05 01:00:59,582] [pool-1-thread-10] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-05 01:01:01,300] [pool-1-thread-7] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-05 01:01:01,569] [pool-1-thread-6] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-05 01:01:04,409] [pool-1-thread-12] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-12-05 01:01:08,346] [pool-1-thread-9] Initializing /data/johannes/step4.bmp: [testng] [2024-12-05 01:01:08,603] [pool-1-thread-10] Initializing /data/glen/singlesimul.oif: [testng] [2024-12-05 01:01:10,439] [pool-1-thread-7] Initializing /data/johannes/step3.bmp: [testng] [2024-12-05 01:01:11,473] [pool-1-thread-9] Initializing /data/glen/Image0002.oif: [testng] [2024-12-05 01:01:14,846] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-05 01:01:15,497] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-05 01:01:16,233] [pool-1-thread-12] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-12-05 01:01:17,956] [pool-1-thread-7] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-05 01:01:20,301] [pool-1-thread-8] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-05 01:01:21,320] [pool-1-thread-3] Initializing /data/johannes/step1.bmp: [testng] [2024-12-05 01:01:21,982] [pool-1-thread-7] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-05 01:01:23,663] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-12-05 01:01:25,989] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-05 01:01:26,990] [pool-1-thread-8] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-05 01:01:27,474] [pool-1-thread-11] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-05 01:01:28,109] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-05 01:01:30,137] [pool-1-thread-6] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-12-05 01:01:32,609] [pool-1-thread-11] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-05 01:01:33,027] [pool-1-thread-3] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-05 01:01:33,778] [pool-1-thread-8] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-12-05 01:01:34,967] [pool-1-thread-5] Initializing /data/michael/CELL3.oib: [testng] [2024-12-05 01:01:35,878] [pool-1-thread-6] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-12-05 01:01:37,645] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-12-05 01:01:38,604] [pool-1-thread-7] Initializing /data/simon/never_worked.oib: [testng] [2024-12-05 01:01:40,351] [pool-1-thread-8] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-05 01:01:41,029] [pool-1-thread-5] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-12-05 01:01:42,464] [pool-1-thread-6] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-05 01:01:43,041] [pool-1-thread-8] Initializing /data/molly/11OCT5.OIF: [testng] [2024-12-05 01:01:56,005] [pool-1-thread-7] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-05 01:01:57,591] [pool-1-thread-11] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-12-05 01:01:59,197] [pool-1-thread-10] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-12-05 01:01:59,793] [pool-1-thread-5] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-12-05 01:02:01,410] [pool-1-thread-7] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-05 01:02:03,075] [pool-1-thread-11] Initializing /data/marc/V0606L.oib: [testng] [2024-12-05 01:02:07,491] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-05 01:02:08,802] [pool-1-thread-7] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-12-05 01:02:09,302] [pool-1-thread-5] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-12-05 01:02:13,969] [pool-1-thread-7] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-12-05 01:02:14,141] [pool-1-thread-5] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-05 01:02:15,001] [pool-1-thread-10] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-12-05 01:02:15,899] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-12-05 01:02:21,032] [pool-1-thread-10] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-12-05 01:02:28,823] [pool-1-thread-11] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-05 01:02:46,156] [pool-1-thread-5] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-05 01:02:47,347] [pool-1-thread-7] Initializing /data/david/Image0016.oif: [testng] [2024-12-05 01:02:52,310] [pool-1-thread-6] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-05 01:02:55,741] [pool-1-thread-3] Initializing /data/marc/V0606J.oib: [testng] [2024-12-05 01:02:57,727] [pool-1-thread-5] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-05 01:03:32,172] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-12-05 01:03:37,927] [pool-1-thread-3] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-12-05 01:04:35,376] [pool-1-thread-7] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-05 01:04:38,147] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-05 01:04:45,949] [pool-1-thread-12] Initializing /data/sten/01.oib: [testng] [2024-12-05 01:04:52,171] [pool-1-thread-12] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-05 01:04:52,932] [pool-1-thread-7] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-12-05 01:04:58,552] [pool-1-thread-12] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-05 01:05:03,546] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib: [testng] [2024-12-05 01:05:11,415] [pool-1-thread-7] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-05 01:13:36,077] [pool-1-thread-6] Initializing /data/jae/Image0001.oib: [testng] [2024-12-05 01:13:42,203] [pool-1-thread-6] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-12-05 01:13:50,060] [pool-1-thread-6] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-05 01:16:51,455] [pool-1-thread-2] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-05 01:16:55,283] [pool-1-thread-2] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-05 01:17:01,137] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-05 01:17:08,011] [pool-1-thread-2] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-05 01:17:13,123] [pool-1-thread-2] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-05 01:17:33,416] [pool-1-thread-12] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-05 01:17:37,574] [pool-1-thread-12] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-12-05 01:17:38,066] [pool-1-thread-2] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-05 01:17:41,698] [pool-1-thread-12] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-12-05 01:17:43,260] [pool-1-thread-2] Initializing /data/christian/20min.oif: [testng] [2024-12-05 01:17:46,478] [pool-1-thread-12] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-05 01:17:53,330] [pool-1-thread-12] Initializing /data/glen/111407.oif: [testng] [2024-12-05 01:18:08,102] [pool-1-thread-2] Initializing /data/glen/simulstack.oif: [testng] [2024-12-05 01:20:36,149] [pool-1-thread-9] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-05 01:20:45,164] [pool-1-thread-9] Initializing /data/yasunori/series_1.oib: [testng] [2024-12-05 01:20:52,406] [pool-1-thread-9] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-05 01:25:50,711] [pool-1-thread-9] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-12-05 01:27:23,291] [pool-1-thread-8] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-12-05 01:28:05,096] [pool-1-thread-5] Initializing /data/glen/singleseqline.oif: [testng] [2024-12-05 01:28:24,522] [pool-1-thread-8] Initializing /data/glen/simulstack.oib: [testng] [2024-12-05 01:28:31,671] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-12-05 01:28:41,141] [pool-1-thread-8] Initializing /data/pedro/plv-test.oib: [testng] [2024-12-05 01:28:48,420] [pool-1-thread-8] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-05 01:28:58,287] [pool-1-thread-8] Initializing /data/allan/62909#1.oib: [testng] [2024-12-05 01:29:05,232] [pool-1-thread-8] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-12-05 01:29:22,509] [pool-1-thread-5] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-05 01:31:40,911] [pool-1-thread-9] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-12-05 01:33:17,764] [pool-1-thread-11] Initializing /data/brian/FLIP.oib: [testng] [2024-12-05 01:33:26,279] [pool-1-thread-11] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-05 01:34:03,525] [pool-1-thread-7] Initializing /data/molly/11OCT11.OIF: [testng] [2024-12-05 01:39:52,549] [pool-1-thread-12] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-05 01:40:13,927] [pool-1-thread-2] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-05 01:40:19,248] [pool-1-thread-2] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-12-05 01:40:20,454] [pool-1-thread-12] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-05 01:40:27,223] [pool-1-thread-12] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-05 01:40:30,178] [pool-1-thread-2] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-05 01:40:35,142] [pool-1-thread-10] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-05 01:40:42,465] [pool-1-thread-10] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-05 01:40:47,743] [pool-1-thread-10] Initializing /data/karl/Image0009.oib: [testng] [2024-12-05 01:40:54,042] [pool-1-thread-10] Initializing /data/molly/11OCT4.OIF: [testng] [2024-12-05 01:41:20,620] [pool-1-thread-12] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-05 01:41:27,414] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-12-05 01:41:35,520] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-05 01:45:01,150] [pool-1-thread-2] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-05 01:45:12,087] [pool-1-thread-2] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-05 01:45:22,109] [pool-1-thread-2] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-12-05 01:45:39,284] [pool-1-thread-2] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-05 01:45:54,452] [pool-1-thread-11] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-05 01:46:04,208] [pool-1-thread-11] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-05 01:48:36,335] [pool-1-thread-6] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-12-05 01:48:37,922] [pool-1-thread-6] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-05 01:51:01,715] [pool-1-thread-1] Initializing /data/monica/Image0056.oif: [testng] [2024-12-05 01:52:06,612] [pool-1-thread-1] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-12-05 01:52:15,170] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-12-05 01:52:27,725] [pool-1-thread-1] Initializing /data/glen/seqlinestack.oif: [testng] [2024-12-05 01:53:54,334] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-05 01:54:06,070] [pool-1-thread-6] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-05 01:54:11,031] [pool-1-thread-6] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-05 01:54:18,685] [pool-1-thread-6] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-05 01:54:24,490] [pool-1-thread-6] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-12-05 01:55:03,238] [pool-1-thread-6] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 02:24:43,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:24:43,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:43,246 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-05_02-24-43.log] [testng] 02:24:43,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@180d9333 - End of configuration. [testng] 02:54:26,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:54:26,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:54:26,855 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-05_02-54-26.log] [testng] 02:54:26,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@102fef39 - End of configuration. [testng] 03:14:50,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:14:50,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:14:50,777 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-05_03-14-50.log] [testng] 03:14:50,777 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b4d2a11 - End of configuration. [testng] 03:23:09,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:23:09,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:09,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-05_03-23-09.log] [testng] 03:23:09,949 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a0d555f - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 151 minutes 35 seconds Finished: SUCCESS