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Started by upstream project "BIOFORMATS-test-repo" build number 281 originally caused by: Started by upstream project "Trigger" build number 301 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins4528825016232526593.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_44276_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:22:10,549 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:22:10,551 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:22:10,551 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:10,553 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:10,553 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:22:10,553 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:22:10,553 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:22:10,553 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:10,554 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:10,554 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:22:10,555 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:22:10,555 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:22:10,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:22:10,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:22:10,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:22:10,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:22:10,825 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:22:10,826 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:22:10,826 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:22:10,826 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:22:10,826 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:22:10,827 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:22:10,827 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 273 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-06 00:22:10,838] [main] java.version = 1.8.0_342 [testng] 00:22:10,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:22:10,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:10,888 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-06_00-22-10.log] [testng] 00:22:10,890 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-06 00:22:10,892] [main] testng.directory = /data [testng] [2024-12-06 00:22:10,892] [main] testng.configDirectory = /config [testng] [2024-12-06 00:22:10,905] [main] testng.multiplier = 1.0 [testng] [2024-12-06 00:22:10,905] [main] testng.in-memory = false [testng] [2024-12-06 00:22:10,905] [main] testng.allow-missing = false [testng] [2024-12-06 00:22:10,905] [main] user.language = en [testng] [2024-12-06 00:22:10,905] [main] user.country = ${user.country} [testng] [2024-12-06 00:22:10,905] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-06 00:22:15,518] [main] ---------------------------------------- [testng] [2024-12-06 00:22:15,519] [main] Total files: 103 [testng] [2024-12-06 00:22:15,519] [main] Scan time: 4.613 s (44 ms/file) [testng] [2024-12-06 00:22:15,519] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-06 00:22:31,299] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] 00:22:31,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:22:31,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:31,301 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-06_00-22-31.log] [testng] 00:22:31,301 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f63a925 - End of configuration. [testng] [2024-12-06 00:22:31,384] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] 00:22:31,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:22:31,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:31,386 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-06_00-22-31.log] [testng] 00:22:31,386 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73e76e0b - End of configuration. [testng] [2024-12-06 00:22:31,497] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] 00:22:31,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:22:31,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:31,498 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-06_00-22-31.log] [testng] 00:22:31,498 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45b66a1b - End of configuration. [testng] [2024-12-06 00:22:31,628] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] 00:22:31,629 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:22:31,629 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:31,630 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-06_00-22-31.log] [testng] 00:22:31,630 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b8cdddc - End of configuration. [testng] [2024-12-06 00:22:32,431] [pool-1-thread-9] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 00:22:32,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:22:32,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:32,431 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-06_00-22-32.log] [testng] 00:22:32,432 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c7c0cf7 - End of configuration. [testng] [2024-12-06 00:22:32,586] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] 00:22:32,586 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:22:32,586 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:32,587 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-06_00-22-32.log] [testng] 00:22:32,587 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4678bb8a - End of configuration. [testng] [2024-12-06 00:22:33,521] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] 00:22:33,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:22:33,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:33,521 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-06_00-22-33.log] [testng] 00:22:33,522 |-INFO in ch.qos.logback.core.sift.SiftProcessor@429b32ce - End of configuration. [testng] [2024-12-06 00:22:33,639] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] 00:22:33,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:22:33,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:33,640 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-06_00-22-33.log] [testng] 00:22:33,640 |-INFO in ch.qos.logback.core.sift.SiftProcessor@385cdf9e - End of configuration. [testng] [2024-12-06 00:22:33,757] [pool-1-thread-5] Initializing /data/jay/Carbon.34.dm3: [testng] 00:22:33,757 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:22:33,757 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:33,758 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-06_00-22-33.log] [testng] 00:22:33,758 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53410e22 - End of configuration. [testng] [2024-12-06 00:22:33,867] [pool-1-thread-4] Initializing /data/jay/dnasample1.dm3: [testng] 00:22:33,868 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:22:33,868 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:33,868 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-06_00-22-33.log] [testng] 00:22:33,869 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a9025ea - End of configuration. [testng] [2024-12-06 00:22:34,104] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3: [testng] 00:22:34,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:22:34,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:34,105 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-06_00-22-34.log] [testng] 00:22:34,105 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62c54ccc - End of configuration. [testng] [2024-12-06 00:22:34,329] [pool-1-thread-2] Initializing /data/jay/ViewDMtest.dm3: [testng] 00:22:34,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:22:34,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:34,330 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-06_00-22-34.log] [testng] 00:22:34,330 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a95ea96 - End of configuration. [testng] [2024-12-06 00:22:38,501] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-12-06 00:22:39,026] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-12-06 00:22:39,676] [pool-1-thread-7] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-12-06 00:22:40,240] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-12-06 00:22:41,537] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-12-06 00:22:42,919] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-12-06 00:22:43,052] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-12-06 00:22:44,285] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-12-06 00:22:44,520] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-12-06 00:22:44,773] [pool-1-thread-9] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-12-06 00:22:46,530] [pool-1-thread-10] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-12-06 00:22:46,690] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-12-06 00:22:48,116] [pool-1-thread-8] Initializing /data/ofra/lowloss.dm3: [testng] [2024-12-06 00:22:48,271] [pool-1-thread-9] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-12-06 00:22:48,482] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-12-06 00:22:49,629] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-12-06 00:22:49,787] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-12-06 00:22:50,491] [pool-1-thread-8] Initializing /data/jay/DMtest2.dm3: [testng] [2024-12-06 00:22:51,368] [pool-1-thread-12] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-12-06 00:22:51,488] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-12-06 00:22:51,636] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-12-06 00:22:52,234] [pool-1-thread-11] Initializing /data/qa-7642/8.dm4: [testng] [2024-12-06 00:22:52,803] [pool-1-thread-7] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-12-06 00:22:52,975] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-12-06 00:22:54,063] [pool-1-thread-6] Initializing /data/melissa/annotation-test.tif: [testng] [2024-12-06 00:22:55,711] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-12-06 00:22:57,694] [pool-1-thread-5] Initializing /data/qa-21761/example.dm4: [testng] [2024-12-06 00:22:58,034] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-12-06 00:22:58,256] [pool-1-thread-8] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-12-06 00:22:58,687] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-12-06 00:23:00,251] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-12-06 00:23:01,059] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-12-06 00:23:01,250] [pool-1-thread-7] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-12-06 00:23:01,801] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-12-06 00:23:02,682] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-12-06 00:23:05,523] [pool-1-thread-5] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-12-06 00:23:05,911] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-12-06 00:23:07,137] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-12-06 00:23:07,315] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-12-06 00:23:08,595] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-12-06 00:23:09,550] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-12-06 00:23:09,787] [pool-1-thread-7] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-12-06 00:23:09,960] [pool-1-thread-5] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-12-06 00:23:10,351] [pool-1-thread-12] Initializing /data/jay/smallerfile.dm3: [testng] [2024-12-06 00:23:11,404] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-12-06 00:23:11,534] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-12-06 00:23:11,695] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-12-06 00:23:12,678] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-12-06 00:23:14,440] [pool-1-thread-12] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-12-06 00:23:15,790] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-12-06 00:23:16,451] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-12-06 00:23:16,632] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-12-06 00:23:18,851] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-12-06 00:23:19,153] [pool-1-thread-2] Initializing /data/samples/test-tiles.dm3: [testng] [2024-12-06 00:23:19,898] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-12-06 00:23:20,791] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-12-06 00:23:21,137] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-12-06 00:23:23,140] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-12-06 00:23:24,330] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-12-06 00:23:24,796] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-12-06 00:23:25,121] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-12-06 00:23:25,291] [pool-1-thread-8] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-12-06 00:23:27,448] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-12-06 00:23:27,903] [pool-1-thread-12] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-12-06 00:23:28,276] [pool-1-thread-1] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-12-06 00:23:29,550] [pool-1-thread-7] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-12-06 00:23:30,024] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-12-06 00:23:31,325] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-12-06 00:23:32,132] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-12-06 00:23:32,310] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-12-06 00:23:33,605] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-12-06 00:23:33,780] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-12-06 00:23:34,918] [pool-1-thread-11] Initializing /data/jay/DMtest.dm3: [testng] [2024-12-06 00:23:35,567] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-12-06 00:23:35,721] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-12-06 00:23:36,463] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-12-06 00:23:36,922] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-12-06 00:23:37,927] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-12-06 00:23:39,028] [pool-1-thread-3] Initializing /data/jay/dnasample.tif: [testng] [2024-12-06 00:23:40,550] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-12-06 00:23:41,572] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-12-06 00:23:41,746] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-12-06 00:23:41,949] [pool-1-thread-11] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-12-06 00:23:43,897] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-12-06 00:23:45,705] [pool-1-thread-2] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-12-06 00:23:45,920] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 54 seconds Finished: SUCCESS