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Started by upstream project "BIOFORMATS-test-repo" build number 281 originally caused by: Started by upstream project "Trigger" build number 301 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins17139081297381696022.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_44315_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:47:10,734 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:47:10,736 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:47:10,736 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:47:10,737 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:47:10,737 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:47:10,737 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:47:10,737 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:47:10,737 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:47:10,738 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:47:10,738 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:47:10,738 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:47:10,738 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:47:10,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:47:10,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:47:10,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:47:10,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:47:10,998 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:47:10,999 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:47:10,999 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:47:10,999 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:47:10,999 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:47:11,000 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:47:11,000 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 262 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-06 00:47:11,010] [main] java.version = 1.8.0_342 [testng] 00:47:11,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:47:11,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:11,058 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-06_00-47-11.log] [testng] 00:47:11,060 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-06 00:47:11,062] [main] testng.directory = /data [testng] [2024-12-06 00:47:11,062] [main] testng.configDirectory = /config [testng] [2024-12-06 00:47:11,074] [main] testng.multiplier = 1.0 [testng] [2024-12-06 00:47:11,075] [main] testng.in-memory = false [testng] [2024-12-06 00:47:11,075] [main] testng.allow-missing = false [testng] [2024-12-06 00:47:11,075] [main] user.language = en [testng] [2024-12-06 00:47:11,075] [main] user.country = ${user.country} [testng] [2024-12-06 00:47:11,075] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-06 00:47:33,899] [main] ---------------------------------------- [testng] [2024-12-06 00:47:33,899] [main] Total files: 259 [testng] [2024-12-06 00:47:33,900] [main] Scan time: 22.824 s (88 ms/file) [testng] [2024-12-06 00:47:33,900] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-06 00:54:21,021] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 00:54:21,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:54:21,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:21,022 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-06_00-54-21.log] [testng] 00:54:21,023 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52b98537 - End of configuration. [testng] [2024-12-06 00:54:22,777] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] 00:54:22,777 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:54:22,777 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:22,778 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-06_00-54-22.log] [testng] 00:54:22,778 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f7b64bc - End of configuration. [testng] [2024-12-06 00:54:23,000] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 00:54:23,000 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:54:23,000 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:23,001 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-06_00-54-23.log] [testng] 00:54:23,001 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56e9fb5a - End of configuration. [testng] [2024-12-06 00:54:25,330] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] 00:54:25,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:54:25,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:25,332 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-06_00-54-25.log] [testng] 00:54:25,332 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34af26db - End of configuration. [testng] [2024-12-06 00:54:25,788] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] 00:54:25,789 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:54:25,789 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:25,790 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-06_00-54-25.log] [testng] 00:54:25,790 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7950afa8 - End of configuration. [testng] [2024-12-06 00:54:26,018] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 00:54:26,018 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:54:26,018 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:26,019 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-06_00-54-26.log] [testng] 00:54:26,019 |-INFO in ch.qos.logback.core.sift.SiftProcessor@657ee9dd - End of configuration. [testng] [2024-12-06 00:54:26,259] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] 00:54:26,259 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:54:26,259 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:26,260 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-06_00-54-26.log] [testng] 00:54:26,260 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6718c57 - End of configuration. [testng] [2024-12-06 00:54:31,005] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] 00:54:31,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:54:31,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:31,005 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-06_00-54-31.log] [testng] 00:54:31,006 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f81a150 - End of configuration. [testng] [2024-12-06 00:54:31,294] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 00:54:31,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:54:31,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:31,295 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-06_00-54-31.log] [testng] 00:54:31,296 |-INFO in ch.qos.logback.core.sift.SiftProcessor@577ad4a7 - End of configuration. [testng] [2024-12-06 00:54:31,558] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] 00:54:31,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:54:31,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:31,559 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-06_00-54-31.log] [testng] 00:54:31,559 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ecaf9df - End of configuration. [testng] [2024-12-06 00:54:35,787] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif: [testng] 00:54:35,787 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:54:35,787 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:35,788 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-06_00-54-35.log] [testng] 00:54:35,788 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42cbdff9 - End of configuration. [testng] [2024-12-06 00:54:36,253] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] 00:54:36,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:54:36,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:36,254 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-06_00-54-36.log] [testng] 00:54:36,255 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ad2762b - End of configuration. [testng] [2024-12-06 00:54:41,166] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-12-06 00:54:41,433] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-06 00:54:41,959] [pool-1-thread-9] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-06 00:54:44,037] [pool-1-thread-2] Initializing /data/glen/seqlinestack.oif: [testng] [2024-12-06 00:54:47,822] [pool-1-thread-6] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-12-06 00:54:48,367] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-06 00:54:48,898] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2024-12-06 00:54:51,250] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-12-06 00:54:53,790] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-12-06 00:54:55,381] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-06 00:54:57,607] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-06 00:55:47,860] [pool-1-thread-8] Initializing /data/glen/simulstack.oib: [testng] [2024-12-06 00:55:49,065] [pool-1-thread-5] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-06 00:56:03,301] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-12-06 00:56:03,955] [pool-1-thread-12] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-06 00:56:08,029] [pool-1-thread-8] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-06 00:56:10,554] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-06 00:56:11,711] [pool-1-thread-3] Initializing /data/monica/Image0056.oif: [testng] [2024-12-06 00:56:13,244] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-06 00:56:17,021] [pool-1-thread-8] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-06 00:56:19,431] [pool-1-thread-12] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-12-06 00:56:26,789] [pool-1-thread-6] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-12-06 00:56:27,635] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-06 00:56:34,623] [pool-1-thread-6] Initializing /data/glen/111407.oif: [testng] [2024-12-06 00:56:37,954] [pool-1-thread-8] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-12-06 00:56:58,026] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-06 00:57:07,951] [pool-1-thread-3] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-06 00:57:43,155] [pool-1-thread-12] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-06 00:57:50,413] [pool-1-thread-12] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-12-06 00:57:56,179] [pool-1-thread-12] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-12-06 00:58:01,977] [pool-1-thread-12] Initializing /data/glen/Image0002.oif: [testng] [2024-12-06 01:02:19,977] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-06 01:02:26,032] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-06 01:02:32,198] [pool-1-thread-9] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-06 01:04:04,299] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-12-06 01:04:11,837] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2024-12-06 01:04:30,354] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-12-06 01:04:54,786] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-12-06 01:04:56,574] [pool-1-thread-3] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-06 01:05:04,635] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-12-06 01:05:10,191] [pool-1-thread-3] Initializing /data/yasunori/series_1.oib: [testng] [2024-12-06 01:05:16,433] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-12-06 01:05:23,060] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-06 01:05:26,583] [pool-1-thread-1] Initializing /data/johannes/step2.bmp: [testng] [2024-12-06 01:05:30,104] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-12-06 01:05:31,368] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-12-06 01:05:37,680] [pool-1-thread-1] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-12-06 01:05:42,985] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-06 01:07:06,489] [pool-1-thread-9] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-12-06 01:07:12,975] [pool-1-thread-9] Initializing /data/david/Image0016.oif: [testng] [2024-12-06 01:08:37,943] [pool-1-thread-9] Initializing /data/molly/11OCT2.OIF: [testng] [2024-12-06 01:08:59,877] [pool-1-thread-3] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-06 01:09:08,338] [pool-1-thread-1] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-12-06 01:09:33,104] [pool-1-thread-1] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-06 01:10:07,916] [pool-1-thread-1] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-06 01:10:13,803] [pool-1-thread-1] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-06 01:10:19,810] [pool-1-thread-1] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-06 01:10:26,547] [pool-1-thread-1] Initializing /data/karl/Image0009.oib: [testng] [2024-12-06 01:10:29,618] [pool-1-thread-1] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-12-06 01:10:36,439] [pool-1-thread-1] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-06 01:10:46,823] [pool-1-thread-6] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-06 01:10:54,049] [pool-1-thread-6] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-06 01:10:59,055] [pool-1-thread-6] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-06 01:11:05,276] [pool-1-thread-6] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-06 01:11:30,291] [pool-1-thread-3] Initializing /data/aryeh/1h.oib: [testng] [2024-12-06 01:11:43,646] [pool-1-thread-3] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-12-06 01:11:51,863] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-06 01:12:00,398] [pool-1-thread-3] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-06 01:12:07,612] [pool-1-thread-3] Initializing /data/brian/FLIP.oib: [testng] [2024-12-06 01:12:15,942] [pool-1-thread-3] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-12-06 01:12:19,514] [pool-1-thread-3] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-06 01:12:24,382] [pool-1-thread-3] Initializing /data/simon/never_worked.oib: [testng] [2024-12-06 01:12:29,240] [pool-1-thread-3] Initializing /data/johannes/step1.bmp: [testng] [2024-12-06 01:12:32,725] [pool-1-thread-3] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-12-06 01:12:40,155] [pool-1-thread-3] Initializing /data/kay/IM2pg.oib: [testng] [2024-12-06 01:12:45,857] [pool-1-thread-3] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-12-06 01:12:50,248] [pool-1-thread-7] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-06 01:13:00,833] [pool-1-thread-3] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-06 01:13:04,255] [pool-1-thread-3] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-06 01:13:07,620] [pool-1-thread-4] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-12-06 01:13:09,227] [pool-1-thread-3] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-06 01:13:12,797] [pool-1-thread-4] Initializing /data/glen/singleseqline.oif: [testng] [2024-12-06 01:13:13,419] [pool-1-thread-3] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-06 01:13:18,203] [pool-1-thread-3] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-12-06 01:13:22,674] [pool-1-thread-3] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-06 01:13:26,376] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-12-06 01:13:30,331] [pool-1-thread-3] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-06 01:13:49,134] [pool-1-thread-3] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-12-06 01:15:05,896] [pool-1-thread-4] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-06 01:15:09,086] [pool-1-thread-12] Initializing /data/david/Image0016.oib: [testng] [2024-12-06 01:15:12,594] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-12-06 01:15:15,204] [pool-1-thread-12] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-06 01:15:35,202] [pool-1-thread-4] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-06 01:15:41,233] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-06 01:16:04,596] [pool-1-thread-8] Initializing /data/allan/62909#1.oib: [testng] [2024-12-06 01:16:16,487] [pool-1-thread-8] Initializing /data/molly/11OCT11.OIF: [testng] [2024-12-06 01:19:11,251] [pool-1-thread-5] Initializing /data/glen/simulstack.oif: [testng] [2024-12-06 01:20:19,641] [pool-1-thread-2] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-06 01:20:31,819] [pool-1-thread-2] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-06 01:25:09,641] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-06 01:25:18,108] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2024-12-06 01:25:48,335] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-06 01:25:55,814] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-06 01:26:29,231] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-06 01:27:39,942] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-06 01:31:46,365] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-06 01:31:58,357] [pool-1-thread-4] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-12-06 01:32:06,373] [pool-1-thread-4] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-06 01:32:17,904] [pool-1-thread-4] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-06 01:32:23,531] [pool-1-thread-4] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-06 01:32:35,504] [pool-1-thread-4] Initializing /data/brian/Kaede15.oib: [testng] [2024-12-06 01:32:47,828] [pool-1-thread-4] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-12-06 01:39:44,009] [pool-1-thread-5] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-06 01:40:28,293] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-06 01:40:34,495] [pool-1-thread-5] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-12-06 01:41:16,603] [pool-1-thread-7] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-06 01:41:22,238] [pool-1-thread-7] Initializing /data/johannes/step4.bmp: [testng] [2024-12-06 01:41:24,497] [pool-1-thread-7] Initializing /data/johannes/step4b.bmp: [testng] [2024-12-06 01:41:26,572] [pool-1-thread-7] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-06 01:41:33,617] [pool-1-thread-7] Initializing /data/johannes/step3.bmp: [testng] [2024-12-06 01:41:35,879] [pool-1-thread-7] Initializing /data/chris/missegragation-15.oib: [testng] [2024-12-06 01:41:41,406] [pool-1-thread-7] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-06 01:41:49,641] [pool-1-thread-12] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-12-06 01:42:00,176] [pool-1-thread-12] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-06 01:42:01,050] [pool-1-thread-1] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-12-06 01:42:46,580] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-06 01:42:51,845] [pool-1-thread-12] Initializing /data/jae/Image0001.oib: [testng] [2024-12-06 01:42:54,584] [pool-1-thread-7] Initializing /data/glen/singlesimul.oif: [testng] [2024-12-06 01:42:59,897] [pool-1-thread-12] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-12-06 01:43:58,254] [pool-1-thread-7] Initializing /data/marc/V0606L.oib: [testng] [2024-12-06 01:44:19,913] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-12-06 01:44:29,169] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 02:19:06,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:19:06,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:06,743 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-06_02-19-06.log] [testng] 02:19:06,743 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17dc2661 - End of configuration. [testng] 03:00:07,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:00:07,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:00:07,154 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-06_03-00-07.log] [testng] 03:00:07,154 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6618a45b - End of configuration. [testng] 03:06:20,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:06:20,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:06:20,275 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-06_03-06-20.log] [testng] 03:06:20,276 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ececd11 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 139 minutes 12 seconds Finished: SUCCESS