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Started by upstream project "BIOFORMATS-test-repo" build number 282 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins1079678053689919985.sh + '[' khoros = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_44502_merge_ci -v /uod/idr/repos/curated/khoros:/data -v /uod/idr-scratch/merge-ci/curated/khoros:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 11:11:01,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 11:11:02,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 11:11:02,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 11:11:02,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 11:11:02,052 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 11:11:02,052 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 11:11:02,052 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 11:11:02,053 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 11:11:02,053 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1139b2f3 - End of configuration. [testng] 11:11:02,054 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@3f197a46 - Registering current configuration as safe fallback point [testng] 11:11:02,054 |-INFO in ch.qos.logback.classic.util.ContextInitializer@636be97c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 505 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-06 11:11:02,064] [main] java.version = 1.8.0_342 [testng] 11:11:02,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 11:11:02,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:11:02,153 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-06_11-11-02.log] [testng] 11:11:02,155 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-06 11:11:02,157] [main] testng.directory = /data [testng] [2024-12-06 11:11:02,157] [main] testng.configDirectory = /config [testng] [2024-12-06 11:11:02,261] [main] testng.multiplier = 1.0 [testng] [2024-12-06 11:11:02,261] [main] testng.in-memory = false [testng] [2024-12-06 11:11:02,261] [main] testng.allow-missing = false [testng] [2024-12-06 11:11:02,261] [main] user.language = en [testng] [2024-12-06 11:11:02,262] [main] user.country = ${user.country} [testng] [2024-12-06 11:11:02,262] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-06 11:11:02,992] [main] ---------------------------------------- [testng] [2024-12-06 11:11:02,992] [main] Total files: 10 [testng] [2024-12-06 11:11:02,992] [main] Scan time: 0.73 s (73 ms/file) [testng] [2024-12-06 11:11:02,992] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 10 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-06 11:11:09,565] [pool-1-thread-1] Initializing /data/samples/ball.xv: [testng] 11:11:09,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 11:11:09,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:11:09,566 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-06_11-11-09.log] [testng] 11:11:09,567 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5681e4c0 - End of configuration. [testng] [2024-12-06 11:11:09,961] [pool-1-thread-10] Initializing /data/samples/airport.xv: [testng] 11:11:09,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 11:11:09,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:11:09,962 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-06_11-11-09.log] [testng] 11:11:09,962 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14b31711 - End of configuration. [testng] [2024-12-06 11:11:10,339] [pool-1-thread-9] Initializing /data/samples/lablabel.xv: [testng] 11:11:10,339 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 11:11:10,339 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:11:10,340 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-06_11-11-10.log] [testng] 11:11:10,340 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41cbb63b - End of configuration. [testng] [2024-12-06 11:11:10,785] [pool-1-thread-8] Initializing /data/samples/kitten.xv: [testng] 11:11:10,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 11:11:10,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:11:10,786 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-06_11-11-10.log] [testng] 11:11:10,787 |-INFO in ch.qos.logback.core.sift.SiftProcessor@274ba455 - End of configuration. [testng] [2024-12-06 11:11:11,191] [pool-1-thread-7] Initializing /data/samples/moon.xv: [testng] 11:11:11,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 11:11:11,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:11:11,191 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-06_11-11-11.log] [testng] 11:11:11,192 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f37f69a - End of configuration. [testng] [2024-12-06 11:11:11,594] [pool-1-thread-6] Initializing /data/samples/head.xv: [testng] 11:11:11,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 11:11:11,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:11:11,595 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-06_11-11-11.log] [testng] 11:11:11,595 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d65bceb - End of configuration. [testng] [2024-12-06 11:11:11,975] [pool-1-thread-5] Initializing /data/samples/wolf.xv: [testng] 11:11:11,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 11:11:11,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:11:11,976 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-06_11-11-11.log] [testng] 11:11:11,977 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c7dd9eb - End of configuration. [testng] [2024-12-06 11:11:12,407] [pool-1-thread-4] Initializing /data/samples/lizard.xv: [testng] 11:11:12,407 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 11:11:12,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:11:12,408 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-06_11-11-12.log] [testng] 11:11:12,408 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f62d896 - End of configuration. [testng] [2024-12-06 11:11:12,769] [pool-1-thread-3] Initializing /data/samples/head8bit.tif: [testng] 11:11:12,769 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 11:11:12,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:11:12,770 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-06_11-11-12.log] [testng] 11:11:12,771 |-INFO in ch.qos.logback.core.sift.SiftProcessor@353f7d86 - End of configuration. [testng] [2024-12-06 11:11:14,822] [pool-1-thread-2] Initializing /data/samples/xray.xv: [testng] 11:11:14,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 11:11:14,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:11:14,823 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-06_11-11-14.log] [testng] 11:11:14,823 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a9ba50d - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 530, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 31 seconds Finished: SUCCESS