![[Jenkins]](/jenkins/static/03ee4b55/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 283 originally caused by: Started by upstream project "Trigger" build number 302 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins436209984387448971.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_44643_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:47:06,524 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:47:06,525 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 00:47:06,525 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:47:06,526 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:47:06,527 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:47:06,527 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:47:06,527 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:47:06,527 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:47:06,528 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:47:06,528 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:47:06,529 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:47:06,529 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:47:06,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:47:06,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:47:06,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:47:06,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:47:06,720 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:47:06,720 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:47:06,721 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:47:06,721 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:47:06,721 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 00:47:06,722 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 00:47:06,722 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 194 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-07 00:47:06,730] [main] java.version = 11.0.16 [testng] 00:47:06,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:47:06,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:06,775 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-07_00-47-06.log] [testng] 00:47:06,776 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-12-07 00:47:06,778] [main] testng.directory = /data [testng] [2024-12-07 00:47:06,779] [main] testng.configDirectory = /config [testng] [2024-12-07 00:47:06,788] [main] testng.multiplier = 1.0 [testng] [2024-12-07 00:47:06,790] [main] testng.in-memory = false [testng] [2024-12-07 00:47:06,790] [main] testng.allow-missing = false [testng] [2024-12-07 00:47:06,790] [main] user.language = en [testng] [2024-12-07 00:47:06,790] [main] user.country = ${user.country} [testng] [2024-12-07 00:47:06,790] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-07 00:47:27,483] [main] ---------------------------------------- [testng] [2024-12-07 00:47:27,483] [main] Total files: 259 [testng] [2024-12-07 00:47:27,483] [main] Scan time: 20.693 s (79 ms/file) [testng] [2024-12-07 00:47:27,483] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-07 00:54:57,288] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] 00:54:57,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:54:57,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:57,291 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-07_00-54-57.log] [testng] 00:54:57,292 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51aaff40 - End of configuration. [testng] [2024-12-07 00:54:57,628] [pool-1-thread-12] Initializing /data/aryeh/030408 2 1.oib: [testng] 00:54:57,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:54:57,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:57,629 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-07_00-54-57.log] [testng] 00:54:57,629 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7543ee0c - End of configuration. [testng] [2024-12-07 00:54:58,066] [pool-1-thread-11] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 00:54:58,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:54:58,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:58,067 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-07_00-54-58.log] [testng] 00:54:58,067 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ef8804a - End of configuration. [testng] [2024-12-07 00:54:58,741] [pool-1-thread-10] Initializing /data/marc/V0606J.oib: [testng] 00:54:58,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:54:58,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:54:58,742 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-07_00-54-58.log] [testng] 00:54:58,742 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79e7ce98 - End of configuration. [testng] [2024-12-07 00:55:00,227] [pool-1-thread-9] Initializing /data/johannes/step4.bmp: [testng] 00:55:00,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:55:00,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:00,228 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-07_00-55-00.log] [testng] 00:55:00,228 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bafc3ff - End of configuration. [testng] [2024-12-07 00:55:00,438] [pool-1-thread-8] Initializing /data/karl/Image0009.oib: [testng] 00:55:00,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:55:00,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:00,439 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-07_00-55-00.log] [testng] 00:55:00,439 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fbe5342 - End of configuration. [testng] [2024-12-07 00:55:00,913] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] 00:55:00,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:55:00,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:00,914 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-07_00-55-00.log] [testng] 00:55:00,914 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ba9bdc8 - End of configuration. [testng] [2024-12-07 00:55:01,450] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] 00:55:01,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:55:01,451 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:01,451 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-07_00-55-01.log] [testng] 00:55:01,452 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18cde7d - End of configuration. [testng] [2024-12-07 00:55:01,940] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF: [testng] 00:55:01,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:55:01,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:01,941 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-07_00-55-01.log] [testng] 00:55:01,941 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25afd6ec - End of configuration. [testng] [2024-12-07 00:55:14,795] [pool-1-thread-4] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] 00:55:14,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:55:14,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:14,796 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-07_00-55-14.log] [testng] 00:55:14,797 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c47c70e - End of configuration. [testng] [2024-12-07 00:55:15,165] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] 00:55:15,165 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:55:15,166 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:15,166 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-07_00-55-15.log] [testng] 00:55:15,167 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a3f5e9f - End of configuration. [testng] [2024-12-07 00:55:15,502] [pool-1-thread-2] Initializing /data/brian/Lambda10nm.oib: [testng] 00:55:15,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:55:15,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:55:15,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-07_00-55-15.log] [testng] 00:55:15,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@558563da - End of configuration. [testng] [2024-12-07 00:55:18,706] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-12-07 00:55:19,439] [pool-1-thread-8] Initializing /data/glen/simulstack.oif: [testng] [2024-12-07 00:55:21,143] [pool-1-thread-2] Initializing /data/molly/11OCT4.OIF: [testng] [2024-12-07 00:55:28,566] [pool-1-thread-1] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-07 00:55:29,190] [pool-1-thread-3] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-07 00:55:29,911] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-07 00:55:30,569] [pool-1-thread-11] Initializing /data/glen/simulstack.oib: [testng] [2024-12-07 00:55:31,072] [pool-1-thread-7] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-07 00:55:31,540] [pool-1-thread-6] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-07 00:55:33,941] [pool-1-thread-9] Initializing /data/david/Image0016.oif: [testng] [2024-12-07 00:55:34,819] [pool-1-thread-12] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-12-07 00:55:39,670] [pool-1-thread-3] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-07 00:55:41,379] [pool-1-thread-1] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-12-07 00:55:42,096] [pool-1-thread-10] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-12-07 00:55:42,567] [pool-1-thread-7] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-12-07 00:55:43,154] [pool-1-thread-11] Initializing /data/chris/missegragation-15.oib: [testng] [2024-12-07 00:55:43,750] [pool-1-thread-6] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-07 00:55:44,449] [pool-1-thread-4] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-07 00:55:47,549] [pool-1-thread-11] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-07 00:55:47,828] [pool-1-thread-7] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-12-07 00:55:49,078] [pool-1-thread-10] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-07 00:56:04,407] [pool-1-thread-1] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-07 00:56:22,927] [pool-1-thread-6] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-07 00:56:24,637] [pool-1-thread-4] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-07 00:56:28,209] [pool-1-thread-11] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-12-07 00:56:33,427] [pool-1-thread-3] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-07 00:56:36,760] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-12-07 00:56:40,571] [pool-1-thread-11] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-07 00:57:43,830] [pool-1-thread-4] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-07 00:57:58,290] [pool-1-thread-9] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-07 00:59:04,943] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-07 00:59:06,787] [pool-1-thread-7] Initializing /data/allan/62909#1.oib: [testng] [2024-12-07 00:59:09,292] [pool-1-thread-7] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-07 00:59:11,238] [pool-1-thread-3] Initializing /data/molly/11OCT5.OIF: [testng] [2024-12-07 00:59:22,015] [pool-1-thread-6] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-07 00:59:26,529] [pool-1-thread-6] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-12-07 01:01:10,905] [pool-1-thread-9] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-07 01:01:14,876] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-07 01:02:17,441] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-07 01:02:25,642] [pool-1-thread-9] Initializing /data/jae/Image0001.oib: [testng] [2024-12-07 01:02:32,177] [pool-1-thread-9] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-07 01:03:17,473] [pool-1-thread-9] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-07 01:03:25,343] [pool-1-thread-9] Initializing /data/glen/singlesimul.oif: [testng] [2024-12-07 01:04:23,409] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-07 01:04:30,164] [pool-1-thread-9] Initializing /data/michael/CELL3.oib: [testng] [2024-12-07 01:04:35,847] [pool-1-thread-9] Initializing /data/simon/never_worked.oib: [testng] [2024-12-07 01:04:40,942] [pool-1-thread-9] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-07 01:05:14,447] [pool-1-thread-9] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-07 01:05:20,133] [pool-1-thread-9] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-07 01:05:26,476] [pool-1-thread-9] Initializing /data/johannes/step1.bmp: [testng] [2024-12-07 01:05:29,692] [pool-1-thread-9] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-07 01:05:35,861] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-07 01:05:40,793] [pool-1-thread-9] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-07 01:06:09,499] [pool-1-thread-9] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-07 01:06:15,577] [pool-1-thread-9] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-12-07 01:09:23,507] [pool-1-thread-8] Initializing /data/glen/111407.oif: [testng] [2024-12-07 01:13:47,035] [pool-1-thread-2] Initializing /data/brian/FLIP.oib: [testng] [2024-12-07 01:13:55,194] [pool-1-thread-2] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-07 01:14:04,492] [pool-1-thread-2] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-12-07 01:14:13,626] [pool-1-thread-2] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-07 01:14:22,166] [pool-1-thread-2] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-07 01:14:35,936] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-07 01:14:46,891] [pool-1-thread-7] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-07 01:15:39,018] [pool-1-thread-2] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-12-07 01:15:46,280] [pool-1-thread-2] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-07 01:15:54,098] [pool-1-thread-2] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-07 01:17:37,988] [pool-1-thread-9] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-07 01:17:46,559] [pool-1-thread-9] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-12-07 01:18:24,587] [pool-1-thread-9] Initializing /data/christian/20min.oif: [testng] [2024-12-07 01:18:32,312] [pool-1-thread-4] Initializing /data/marc/V0606L.oib: [testng] [2024-12-07 01:18:52,710] [pool-1-thread-4] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-07 01:19:05,821] [pool-1-thread-9] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-12-07 01:20:06,283] [pool-1-thread-9] Initializing /data/johannes/step4b.bmp: [testng] [2024-12-07 01:20:10,016] [pool-1-thread-9] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-07 01:20:18,102] [pool-1-thread-9] Initializing /data/aryeh/1h.oib: [testng] [2024-12-07 01:20:29,760] [pool-1-thread-9] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-12-07 01:20:38,020] [pool-1-thread-9] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-07 01:22:44,059] [pool-1-thread-3] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-12-07 01:22:46,490] [pool-1-thread-3] Initializing /data/david/Image0016.oib: [testng] [2024-12-07 01:22:49,958] [pool-1-thread-12] Initializing /data/monica/Image0056.oif: [testng] [2024-12-07 01:22:57,409] [pool-1-thread-3] Initializing /data/glen/Image0002.oif: [testng] [2024-12-07 01:24:13,280] [pool-1-thread-12] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-07 01:24:18,987] [pool-1-thread-12] Initializing /data/yasunori/series_1.oib: [testng] [2024-12-07 01:24:25,240] [pool-1-thread-12] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-12-07 01:24:49,710] [pool-1-thread-12] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-12-07 01:24:56,227] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-07 01:25:03,086] [pool-1-thread-12] Initializing /data/johannes/step3.bmp: [testng] [2024-12-07 01:25:05,725] [pool-1-thread-12] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-12-07 01:28:22,756] [pool-1-thread-10] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-07 01:28:26,143] [pool-1-thread-8] Initializing /data/kay/IM2pg.oib: [testng] [2024-12-07 01:28:29,677] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-12-07 01:28:33,798] [pool-1-thread-8] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-07 01:28:36,551] [pool-1-thread-10] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-12-07 01:28:39,531] [pool-1-thread-8] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-07 01:28:49,528] [pool-1-thread-10] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-12-07 01:29:12,666] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-07 01:29:19,399] [pool-1-thread-12] Initializing /data/glen/seqlinestack.oif: [testng] [2024-12-07 01:29:54,950] [pool-1-thread-4] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-07 01:30:04,240] [pool-1-thread-4] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-07 01:30:11,880] [pool-1-thread-4] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-12-07 01:30:21,386] [pool-1-thread-4] Initializing /data/pedro/plv-test.oib: [testng] [2024-12-07 01:30:31,466] [pool-1-thread-4] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-12-07 01:35:09,862] [pool-1-thread-9] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-12-07 01:37:57,191] [pool-1-thread-5] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-07 01:38:02,647] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-07 01:38:07,886] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-12-07 01:38:13,215] [pool-1-thread-5] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-12-07 01:38:23,041] [pool-1-thread-5] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-07 01:38:28,305] [pool-1-thread-5] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-07 01:38:34,887] [pool-1-thread-5] Initializing /data/sten/01.oib: [testng] [2024-12-07 01:38:41,034] [pool-1-thread-5] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-07 01:38:48,113] [pool-1-thread-5] Initializing /data/johannes/step2.bmp: [testng] [2024-12-07 01:38:50,766] [pool-1-thread-5] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-12-07 01:41:25,368] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-12-07 01:41:34,139] [pool-1-thread-1] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-12-07 01:41:41,804] [pool-1-thread-1] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-12-07 01:42:24,011] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-07 01:42:30,378] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-12-07 01:42:38,586] [pool-1-thread-1] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-07 01:42:44,449] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-12-07 01:42:50,198] [pool-1-thread-1] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-12-07 01:42:57,164] [pool-1-thread-1] Initializing /data/glen/singleseqline.oif: [testng] [2024-12-07 01:43:09,409] [pool-1-thread-7] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-07 01:43:56,485] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-07 01:44:01,784] [pool-1-thread-1] Initializing /data/molly/11OCT11.OIF: [testng] [2024-12-07 01:44:41,494] [pool-1-thread-3] Initializing /data/brian/Kaede15.oib: [testng] [2024-12-07 01:44:44,663] [pool-1-thread-7] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-07 01:44:55,848] [pool-1-thread-3] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-07 01:45:07,316] [pool-1-thread-7] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-12-07 01:45:19,059] [pool-1-thread-7] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-12-07 01:45:22,937] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-12-07 01:45:30,997] [pool-1-thread-7] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 02:14:59,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:14:59,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:59,067 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-07_02-14-59.log] [testng] 02:14:59,067 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46adcfc4 - End of configuration. [testng] 02:26:28,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:26:28,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:26:28,091 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-07_02-26-28.log] [testng] 02:26:28,091 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ffd3a89 - End of configuration. [testng] 03:16:14,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:16:14,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:16:14,183 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-07_03-16-14.log] [testng] 03:16:14,183 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54eaf69d - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 149 minutes 10 seconds Finished: SUCCESS