![[Jenkins]](/jenkins/static/28c89a1b/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 284 originally caused by: Started by upstream project "Trigger" build number 303 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins9324681717152319550.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_44894_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 03:42:38,397 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:42:38,398 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 03:42:38,398 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:42:38,399 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:42:38,399 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:42:38,399 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:42:38,400 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:42:38,400 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:42:38,400 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:42:38,401 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:42:38,401 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:42:38,401 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:42:38,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:42:38,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:42:38,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:42:38,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:42:38,582 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:42:38,582 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:42:38,582 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:42:38,583 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:42:38,583 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 03:42:38,584 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 03:42:38,584 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 184 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-08 03:42:38,592] [main] java.version = 17.0.2 [testng] 03:42:38,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:42:38,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:42:38,634 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-08_03-42-38.log] [testng] 03:42:38,635 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-12-08 03:42:38,637] [main] testng.directory = /data [testng] [2024-12-08 03:42:38,637] [main] testng.configDirectory = /config [testng] [2024-12-08 03:42:38,645] [main] testng.multiplier = 1.0 [testng] [2024-12-08 03:42:38,646] [main] testng.in-memory = false [testng] [2024-12-08 03:42:38,646] [main] testng.allow-missing = false [testng] [2024-12-08 03:42:38,646] [main] user.language = en [testng] [2024-12-08 03:42:38,646] [main] user.country = ${user.country} [testng] [2024-12-08 03:42:38,646] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-08 03:44:01,883] [main] ---------------------------------------- [testng] [2024-12-08 03:44:01,883] [main] Total files: 15735 [testng] [2024-12-08 03:44:01,883] [main] Scan time: 83.236 s (5 ms/file) [testng] [2024-12-08 03:44:01,883] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-08 03:45:07,947] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] 03:45:07,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:45:07,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:07,949 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-08_03-45-07.log] [testng] 03:45:07,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b6f402a - End of configuration. [testng] [2024-12-08 03:45:08,152] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] 03:45:08,153 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:45:08,153 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:08,153 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-08_03-45-08.log] [testng] 03:45:08,154 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49c75b67 - End of configuration. [testng] [2024-12-08 03:45:08,760] [pool-1-thread-11] Initializing /data/converted/converted/damian.tif: [testng] 03:45:08,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:45:08,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:08,761 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-08_03-45-08.log] [testng] 03:45:08,762 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2dab51e6 - End of configuration. [testng] [2024-12-08 03:45:08,964] [pool-1-thread-10] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] 03:45:08,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:45:08,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:08,965 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-08_03-45-08.log] [testng] 03:45:08,965 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49411755 - End of configuration. [testng] [2024-12-08 03:45:10,036] [pool-1-thread-9] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] 03:45:10,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:45:10,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:10,036 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-08_03-45-10.log] [testng] 03:45:10,037 |-INFO in ch.qos.logback.core.sift.SiftProcessor@589e9d70 - End of configuration. [testng] [2024-12-08 03:45:10,595] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] 03:45:10,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:45:10,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:10,596 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-08_03-45-10.log] [testng] 03:45:10,596 |-INFO in ch.qos.logback.core.sift.SiftProcessor@116eb0fd - End of configuration. [testng] [2024-12-08 03:45:10,992] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] 03:45:10,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:45:10,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:10,993 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-08_03-45-10.log] [testng] 03:45:10,993 |-INFO in ch.qos.logback.core.sift.SiftProcessor@778e1072 - End of configuration. [testng] [2024-12-08 03:45:11,793] [pool-1-thread-6] Initializing /data/converted/sebastien/test.tif: [testng] 03:45:11,793 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:45:11,793 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:11,794 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-08_03-45-11.log] [testng] 03:45:11,794 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d92ad41 - End of configuration. [testng] [2024-12-08 03:45:12,503] [pool-1-thread-5] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] 03:45:12,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:45:12,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:12,504 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-08_03-45-12.log] [testng] 03:45:12,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@424163b4 - End of configuration. [testng] [2024-12-08 03:45:12,822] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif: [testng] 03:45:12,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:45:12,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:12,823 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-08_03-45-12.log] [testng] 03:45:12,823 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37789333 - End of configuration. [testng] [2024-12-08 03:45:13,250] [pool-1-thread-3] Initializing /data/converted/michel/b.tif: [testng] 03:45:13,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:45:13,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:13,251 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-08_03-45-13.log] [testng] 03:45:13,251 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74fa9a51 - End of configuration. [testng] [2024-12-08 03:45:13,596] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] 03:45:13,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:45:13,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:45:13,597 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-08_03-45-13.log] [testng] 03:45:13,597 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6be434a4 - End of configuration. [testng] [2024-12-08 03:45:27,599] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-12-08 03:45:34,311] [pool-1-thread-1] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2024-12-08 03:45:35,362] [pool-1-thread-3] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-12-08 03:45:56,416] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-12-08 03:47:44,939] [pool-1-thread-5] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-12-08 03:47:48,137] [pool-1-thread-4] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-12-08 03:48:13,540] [pool-1-thread-1] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-12-08 03:48:41,115] [pool-1-thread-1] Initializing /data/converted/michel/e.tif: [testng] [2024-12-08 03:49:48,529] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-12-08 03:50:24,903] [pool-1-thread-4] Initializing /data/converted/michel/a.tif: [testng] [2024-12-08 03:50:33,455] [pool-1-thread-11] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-12-08 03:50:56,528] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-12-08 03:51:14,095] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-12-08 03:51:35,333] [pool-1-thread-2] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-12-08 03:51:51,174] [pool-1-thread-7] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-12-08 03:52:12,837] [pool-1-thread-7] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-12-08 03:52:21,159] [pool-1-thread-2] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-12-08 03:52:25,489] [pool-1-thread-12] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-12-08 03:52:50,195] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-12-08 03:52:54,207] [pool-1-thread-7] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-12-08 03:53:29,216] [pool-1-thread-6] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-12-08 03:53:54,211] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-12-08 03:53:56,511] [pool-1-thread-3] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-12-08 03:54:25,070] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-12-08 03:54:49,982] [pool-1-thread-9] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-12-08 03:54:57,526] [pool-1-thread-7] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-12-08 03:55:10,199] [pool-1-thread-2] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-12-08 03:55:15,739] [pool-1-thread-8] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-12-08 03:55:34,350] [pool-1-thread-11] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-12-08 03:55:54,430] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-12-08 03:56:31,097] [pool-1-thread-12] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-12-08 03:57:03,925] [pool-1-thread-12] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-12-08 03:57:33,005] [pool-1-thread-12] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-12-08 03:57:53,138] [pool-1-thread-3] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-12-08 03:57:59,060] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-12-08 04:01:03,863] [pool-1-thread-6] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-12-08 04:01:43,512] [pool-1-thread-11] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-12-08 04:02:16,366] [pool-1-thread-4] Initializing /data/scott/Slide133-08.tif: [testng] [2024-12-08 04:02:41,570] [pool-1-thread-4] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-12-08 04:02:42,928] [pool-1-thread-1] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-12-08 04:03:17,062] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-12-08 04:03:25,146] [pool-1-thread-11] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-12-08 04:03:35,163] [pool-1-thread-9] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-12-08 04:03:52,659] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-12-08 04:03:58,253] [pool-1-thread-9] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-12-08 04:05:18,748] [pool-1-thread-12] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-12-08 04:07:17,273] [pool-1-thread-6] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-12-08 04:09:25,211] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-12-08 04:09:49,968] [pool-1-thread-8] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-12-08 04:10:56,803] [pool-1-thread-11] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-12-08 04:11:52,986] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-12-08 04:12:17,061] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-12-08 04:16:42,956] [pool-1-thread-3] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-12-08 04:16:49,163] [pool-1-thread-10] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-12-08 04:17:16,051] [pool-1-thread-3] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-12-08 04:17:18,320] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-12-08 04:18:05,664] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-12-08 04:19:41,342] [pool-1-thread-1] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-12-08 04:19:45,412] [pool-1-thread-8] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-12-08 04:20:08,354] [pool-1-thread-1] Initializing /data/scott/Slide133-04.tif: [testng] [2024-12-08 04:20:24,264] [pool-1-thread-4] Initializing /data/converted/converted/2chz.tif: [testng] [2024-12-08 04:20:41,879] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-12-08 04:22:19,209] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-12-08 04:23:46,891] [pool-1-thread-8] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-12-08 04:23:57,018] [pool-1-thread-5] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-12-08 04:23:59,136] [pool-1-thread-4] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-12-08 04:24:36,795] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-12-08 04:24:56,311] [pool-1-thread-5] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-12-08 04:25:28,521] [pool-1-thread-5] Initializing /data/converted/michel/c.tif: [testng] [2024-12-08 04:25:45,517] [pool-1-thread-4] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-12-08 04:25:47,629] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-12-08 04:25:59,829] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-12-08 04:26:15,126] [pool-1-thread-5] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-12-08 04:26:57,264] [pool-1-thread-4] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-12-08 04:28:32,758] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-12-08 04:29:26,128] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-12-08 04:29:41,145] [pool-1-thread-1] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-12-08 04:30:31,239] [pool-1-thread-3] Initializing /data/converted/dietmar/138.tif: [testng] [2024-12-08 04:31:12,461] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-12-08 04:32:20,087] [pool-1-thread-9] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-12-08 04:34:03,807] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] [2024-12-08 04:34:35,575] [pool-1-thread-10] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-12-08 04:34:41,276] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-12-08 04:35:26,642] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-12-08 04:36:26,358] [pool-1-thread-10] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-12-08 04:36:27,784] [pool-1-thread-5] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-12-08 04:36:36,585] [pool-1-thread-7] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-12-08 04:36:56,800] [pool-1-thread-4] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-12-08 04:37:02,020] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-12-08 04:37:11,698] [pool-1-thread-5] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-12-08 04:37:22,795] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-12-08 04:37:32,605] [pool-1-thread-10] Initializing /data/scott/Slide133-11.tif: [testng] [2024-12-08 04:37:45,094] [pool-1-thread-5] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-12-08 04:37:55,353] [pool-1-thread-3] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-12-08 04:38:00,917] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-12-08 04:38:48,339] [pool-1-thread-3] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-12-08 04:39:16,341] [pool-1-thread-3] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-12-08 04:39:23,798] [pool-1-thread-12] Initializing /data/converted/michel/d.tif: [testng] [2024-12-08 04:39:28,709] [pool-1-thread-1] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-12-08 04:40:00,376] [pool-1-thread-12] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-12-08 04:40:04,026] [pool-1-thread-1] Initializing /data/scott/Slide133-01.tif: [testng] [2024-12-08 04:40:27,625] [pool-1-thread-12] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-12-08 04:40:32,151] [pool-1-thread-7] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-12-08 04:40:36,760] [pool-1-thread-1] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-12-08 04:41:06,714] [pool-1-thread-1] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-12-08 04:41:21,438] [pool-1-thread-7] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-12-08 04:41:35,184] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-12-08 04:41:37,387] [pool-1-thread-1] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-12-08 04:42:00,350] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-12-08 04:42:08,068] [pool-1-thread-1] Initializing /data/converted/nicolas/image.tif: [testng] [2024-12-08 04:42:22,878] [pool-1-thread-9] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-12-08 04:42:32,771] [pool-1-thread-1] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-12-08 04:42:34,359] [pool-1-thread-9] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] 05:25:15,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:25:15,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:25:15,351 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-08_05-25-15.log] [testng] 05:25:15,351 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41fc5625 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 102 minutes 42 seconds Finished: SUCCESS