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Started by upstream project "BIOFORMATS-test-repo" build number 285 originally caused by: Started by upstream project "Trigger" build number 304 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins624514874940250611.sh + '[' afi = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_45010_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:49:21,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:49:21,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:49:21,584 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:49:21,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:49:21,629 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:49:21,629 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:49:21,630 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:49:21,630 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:49:21,630 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1139b2f3 - End of configuration. [testng] 01:49:21,647 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@3f197a46 - Registering current configuration as safe fallback point [testng] 01:49:21,647 |-INFO in ch.qos.logback.classic.util.ContextInitializer@636be97c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 593 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-09 01:49:21,664] [main] java.version = 1.8.0_342 [testng] 01:49:21,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:49:21,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:21,767 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-09_01-49-21.log] [testng] 01:49:21,769 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-09 01:49:21,790] [main] testng.directory = /data [testng] [2024-12-09 01:49:21,790] [main] testng.configDirectory = /config [testng] [2024-12-09 01:49:21,802] [main] testng.multiplier = 1.0 [testng] [2024-12-09 01:49:21,803] [main] testng.in-memory = false [testng] [2024-12-09 01:49:21,803] [main] testng.allow-missing = false [testng] [2024-12-09 01:49:21,803] [main] user.language = fr [testng] [2024-12-09 01:49:21,803] [main] user.country = FR [testng] [2024-12-09 01:49:21,803] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-09 01:49:24,704] [main] ---------------------------------------- [testng] [2024-12-09 01:49:24,705] [main] Total files: 16 [testng] [2024-12-09 01:49:24,705] [main] Scan time: 2.901 s (181 ms/file) [testng] [2024-12-09 01:49:24,705] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 15 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-09 01:49:49,845] [pool-1-thread-1] Initializing /data/samples/5351.afi: [testng] 01:49:49,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:49:49,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:49,846 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-09_01-49-49.log] [testng] 01:49:49,847 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ffd2d3c - End of configuration. [testng] [2024-12-09 01:49:50,701] [pool-1-thread-12] Initializing /data/samples/5440.afi: [testng] 01:49:50,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:49:50,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:50,703 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-09_01-49-50.log] [testng] 01:49:50,704 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19b8476 - End of configuration. [testng] [2024-12-09 01:49:51,475] [pool-1-thread-11] Initializing /data/samples/5407.afi: [testng] 01:49:51,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:49:51,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:51,476 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-09_01-49-51.log] [testng] 01:49:51,476 |-INFO in ch.qos.logback.core.sift.SiftProcessor@492cd3e0 - End of configuration. [testng] [2024-12-09 01:49:52,603] [pool-1-thread-10] Initializing /data/samples/5365.afi: [testng] 01:49:52,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:49:52,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:52,604 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-09_01-49-52.log] [testng] 01:49:52,604 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fe80a71 - End of configuration. [testng] [2024-12-09 01:49:53,722] [pool-1-thread-9] Initializing /data/samples/5339.afi: [testng] 01:49:53,723 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:49:53,723 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:53,723 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-09_01-49-53.log] [testng] 01:49:53,724 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31ec6df - End of configuration. [testng] [2024-12-09 01:49:54,142] [pool-1-thread-8] Initializing /data/samples/5343.afi: [testng] 01:49:54,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:49:54,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:54,143 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-09_01-49-54.log] [testng] 01:49:54,143 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ea4082c - End of configuration. [testng] [2024-12-09 01:49:54,814] [pool-1-thread-7] Initializing /data/samples/5347.afi: [testng] 01:49:54,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:49:54,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:54,815 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-09_01-49-54.log] [testng] 01:49:54,816 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20c8b8f3 - End of configuration. [testng] [2024-12-09 01:49:55,693] [pool-1-thread-6] Initializing /data/samples/5383.afi: [testng] 01:49:55,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:49:55,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:55,693 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-09_01-49-55.log] [testng] 01:49:55,694 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36db5936 - End of configuration. [testng] [2024-12-09 01:49:56,252] [pool-1-thread-5] Initializing /data/samples/5400.afi: [testng] 01:49:56,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:49:56,253 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:56,254 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-09_01-49-56.log] [testng] 01:49:56,255 |-INFO in ch.qos.logback.core.sift.SiftProcessor@723fb45b - End of configuration. [testng] [2024-12-09 01:49:57,646] [pool-1-thread-4] Initializing /data/samples/5371.afi: [testng] 01:49:57,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:49:57,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:57,647 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-09_01-49-57.log] [testng] 01:49:57,647 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45c95e35 - End of configuration. [testng] [2024-12-09 01:49:58,976] [pool-1-thread-3] Initializing /data/samples/5446.afi: [testng] 01:49:58,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:49:58,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:58,977 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-09_01-49-58.log] [testng] 01:49:58,977 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e2fe89d - End of configuration. [testng] [2024-12-09 01:49:59,687] [pool-1-thread-2] Initializing /data/samples/5306.afi: [testng] 01:49:59,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:49:59,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:49:59,688 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-09_01-49-59.log] [testng] 01:49:59,689 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57166082 - End of configuration. [testng] [2024-12-09 01:50:48,942] [pool-1-thread-3] Initializing /data/samples/5387.afi: [testng] [2024-12-09 01:50:49,702] [pool-1-thread-5] Initializing /data/samples/5358.afi: [testng] [2024-12-09 01:50:52,193] [pool-1-thread-12] Initializing /data/samples/5414.afi: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 795, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 2 minutes 29 seconds Finished: SUCCESS