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Started by upstream project "BIOFORMATS-test-repo" build number 285 originally caused by: Started by upstream project "Trigger" build number 304 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins1453492502693547800.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_45058_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 03:29:06,358 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:29:06,360 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 03:29:06,360 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:29:06,361 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:29:06,361 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:29:06,361 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:29:06,361 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:29:06,361 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:29:06,362 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:29:06,362 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:29:06,362 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:29:06,362 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:29:06,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:29:06,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:29:06,624 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:29:06,624 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:29:06,632 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:29:06,632 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:29:06,632 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:29:06,633 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:29:06,633 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 03:29:06,634 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 03:29:06,634 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 272 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-09 03:29:06,644] [main] java.version = 1.8.0_342 [testng] 03:29:06,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:29:06,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:29:06,693 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-09_03-29-06.log] [testng] 03:29:06,695 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-09 03:29:06,697] [main] testng.directory = /data [testng] [2024-12-09 03:29:06,697] [main] testng.configDirectory = /config [testng] [2024-12-09 03:29:06,710] [main] testng.multiplier = 1.0 [testng] [2024-12-09 03:29:06,710] [main] testng.in-memory = false [testng] [2024-12-09 03:29:06,710] [main] testng.allow-missing = false [testng] [2024-12-09 03:29:06,710] [main] user.language = fr [testng] [2024-12-09 03:29:06,710] [main] user.country = FR [testng] [2024-12-09 03:29:06,710] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-09 03:31:10,046] [main] ---------------------------------------- [testng] [2024-12-09 03:31:10,046] [main] Total files: 15735 [testng] [2024-12-09 03:31:10,047] [main] Scan time: 123.335 s (7 ms/file) [testng] [2024-12-09 03:31:10,047] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-09 03:34:01,638] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] 03:34:01,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:34:01,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:01,641 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-09_03-34-01.log] [testng] 03:34:01,641 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e756d8e - End of configuration. [testng] [2024-12-09 03:34:02,978] [pool-1-thread-12] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] 03:34:02,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:34:02,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:02,979 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-09_03-34-02.log] [testng] 03:34:02,979 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ea190ba - End of configuration. [testng] [2024-12-09 03:34:03,869] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 03:34:03,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:34:03,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:03,870 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-09_03-34-03.log] [testng] 03:34:03,870 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12f47d36 - End of configuration. [testng] [2024-12-09 03:34:04,800] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif: [testng] 03:34:04,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:34:04,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:04,801 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-09_03-34-04.log] [testng] 03:34:04,801 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6813092d - End of configuration. [testng] [2024-12-09 03:34:05,600] [pool-1-thread-9] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] 03:34:05,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:34:05,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:05,601 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-09_03-34-05.log] [testng] 03:34:05,601 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ebda8e - End of configuration. [testng] [2024-12-09 03:34:06,782] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif: [testng] 03:34:06,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:34:06,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:06,783 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-09_03-34-06.log] [testng] 03:34:06,783 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28481244 - End of configuration. [testng] [2024-12-09 03:34:07,453] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 03:34:07,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:34:07,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:07,454 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-09_03-34-07.log] [testng] 03:34:07,454 |-INFO in ch.qos.logback.core.sift.SiftProcessor@506f59b7 - End of configuration. [testng] [2024-12-09 03:34:08,195] [pool-1-thread-6] Initializing /data/converted/dietmar/138.tif: [testng] 03:34:08,195 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:34:08,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:08,196 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-09_03-34-08.log] [testng] 03:34:08,196 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2890f8c2 - End of configuration. [testng] [2024-12-09 03:34:09,204] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] 03:34:09,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:34:09,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:09,205 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-09_03-34-09.log] [testng] 03:34:09,205 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31861401 - End of configuration. [testng] [2024-12-09 03:34:10,701] [pool-1-thread-4] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 03:34:10,701 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:34:10,701 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:10,702 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-09_03-34-10.log] [testng] 03:34:10,702 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58e7252d - End of configuration. [testng] [2024-12-09 03:34:11,941] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] 03:34:11,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:34:11,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:11,942 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-09_03-34-11.log] [testng] 03:34:11,942 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4adfea8a - End of configuration. [testng] [2024-12-09 03:34:12,865] [pool-1-thread-2] Initializing /data/converted/converted/damian.tif: [testng] 03:34:12,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:34:12,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:34:12,865 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-09_03-34-12.log] [testng] 03:34:12,866 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54f59b62 - End of configuration. [testng] [2024-12-09 03:34:34,721] [pool-1-thread-2] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-12-09 03:34:35,794] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-12-09 03:34:36,790] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-12-09 03:34:37,980] [pool-1-thread-3] Initializing /data/scott/Slide133-04.tif: [testng] [2024-12-09 03:34:55,790] [pool-1-thread-2] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-12-09 03:35:03,918] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-12-09 03:35:16,698] [pool-1-thread-12] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-12-09 03:35:27,322] [pool-1-thread-2] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-12-09 03:35:29,825] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-12-09 03:36:33,370] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-12-09 03:36:48,193] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif: [testng] [2024-12-09 03:36:52,013] [pool-1-thread-8] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-12-09 03:36:53,172] [pool-1-thread-4] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-12-09 03:37:08,411] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-12-09 03:37:12,716] [pool-1-thread-8] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-12-09 03:37:24,158] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-12-09 03:37:25,115] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-12-09 03:37:31,294] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-12-09 03:37:39,477] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-12-09 03:38:35,796] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-12-09 03:38:52,115] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-12-09 03:38:56,164] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-12-09 03:39:10,330] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-12-09 03:39:17,846] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-12-09 03:39:19,145] [pool-1-thread-7] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-12-09 03:40:00,598] [pool-1-thread-10] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-12-09 03:41:01,351] [pool-1-thread-8] Initializing /data/othmar/mozaic.tif: [testng] [2024-12-09 03:42:00,345] [pool-1-thread-9] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-12-09 03:42:45,106] [pool-1-thread-3] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-12-09 03:42:57,749] [pool-1-thread-11] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-12-09 03:43:42,489] [pool-1-thread-8] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-12-09 03:43:49,549] [pool-1-thread-4] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-12-09 03:44:00,209] [pool-1-thread-8] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-12-09 03:44:13,528] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-12-09 03:44:39,534] [pool-1-thread-6] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-12-09 03:44:56,422] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif: [testng] [2024-12-09 03:45:10,924] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-12-09 03:45:15,328] [pool-1-thread-11] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-12-09 03:45:22,698] [pool-1-thread-6] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-12-09 03:45:30,354] [pool-1-thread-11] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-12-09 03:48:42,248] [pool-1-thread-11] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-12-09 03:49:19,820] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-12-09 03:51:34,191] [pool-1-thread-7] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-12-09 03:52:01,594] [pool-1-thread-4] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-12-09 03:52:09,464] [pool-1-thread-10] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-12-09 03:52:34,175] [pool-1-thread-10] Initializing /data/converted/dietmar/137.tif: [testng] [2024-12-09 03:52:39,065] [pool-1-thread-4] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-12-09 03:52:52,575] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-12-09 03:54:47,198] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-12-09 03:56:55,337] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-12-09 03:57:10,398] [pool-1-thread-9] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-12-09 03:58:25,081] [pool-1-thread-8] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-12-09 03:59:03,096] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-12-09 03:59:24,351] [pool-1-thread-5] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-12-09 03:59:30,751] [pool-1-thread-9] Initializing /data/converted/sebastien/test.tif: [testng] [2024-12-09 04:01:10,842] [pool-1-thread-3] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-12-09 04:02:17,516] [pool-1-thread-5] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-12-09 04:03:10,647] [pool-1-thread-3] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-12-09 04:03:22,959] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-12-09 04:05:32,211] [pool-1-thread-3] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-12-09 04:06:29,315] [pool-1-thread-1] Initializing /data/converted/michel/c.tif: [testng] [2024-12-09 04:06:54,013] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-12-09 04:07:14,395] [pool-1-thread-1] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-12-09 04:07:42,531] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-12-09 04:07:51,729] [pool-1-thread-1] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-12-09 04:08:13,086] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-12-09 04:08:32,462] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-12-09 04:08:37,345] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-12-09 04:09:28,639] [pool-1-thread-9] Initializing /data/converted/michel/e.tif: [testng] [2024-12-09 04:10:06,254] [pool-1-thread-5] Initializing /data/converted/nicolas/image.tif: [testng] [2024-12-09 04:10:31,231] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-12-09 04:10:35,173] [pool-1-thread-5] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-12-09 04:11:46,294] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-12-09 04:12:19,493] [pool-1-thread-2] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-12-09 04:15:11,673] [pool-1-thread-2] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-12-09 04:15:48,775] [pool-1-thread-2] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-12-09 04:16:48,255] [pool-1-thread-11] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-12-09 04:16:56,816] [pool-1-thread-2] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-12-09 04:17:05,739] [pool-1-thread-7] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-12-09 04:17:24,344] [pool-1-thread-11] Initializing /data/converted/michel/a.tif: [testng] [2024-12-09 04:17:44,553] [pool-1-thread-3] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-12-09 04:17:46,691] [pool-1-thread-2] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-12-09 04:17:53,106] [pool-1-thread-11] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-12-09 04:18:01,247] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-12-09 04:18:12,561] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-12-09 04:18:22,901] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-12-09 04:18:27,432] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-12-09 04:18:29,777] [pool-1-thread-3] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-12-09 04:18:53,271] [pool-1-thread-8] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-12-09 04:19:28,493] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-12-09 04:19:37,185] [pool-1-thread-9] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-12-09 04:19:55,228] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-12-09 04:20:44,294] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-12-09 04:21:32,742] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-12-09 04:26:20,355] [pool-1-thread-9] Initializing /data/converted/michel/b.tif: [testng] [2024-12-09 04:26:32,436] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-12-09 04:26:56,885] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-12-09 04:27:22,672] [pool-1-thread-1] Initializing /data/converted/michel/d.tif: [testng] [2024-12-09 04:27:32,006] [pool-1-thread-7] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-12-09 04:27:47,386] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-12-09 04:27:58,429] [pool-1-thread-1] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-12-09 04:28:03,465] [pool-1-thread-7] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-12-09 04:28:13,454] [pool-1-thread-7] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-12-09 04:28:19,310] [pool-1-thread-4] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-12-09 04:28:32,298] [pool-1-thread-8] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-12-09 04:28:35,834] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-12-09 04:28:47,147] [pool-1-thread-1] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-12-09 04:29:06,630] [pool-1-thread-10] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-12-09 04:29:10,183] [pool-1-thread-2] Initializing /data/scott/Slide133-08.tif: [testng] [2024-12-09 04:29:29,470] [pool-1-thread-10] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-12-09 04:29:40,548] [pool-1-thread-2] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-12-09 04:29:59,574] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-12-09 04:30:18,649] [pool-1-thread-2] Initializing /data/converted/lior/live+cf5b.tif: [testng] 05:07:17,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:07:17,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:07:17,320 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-09_05-07-17.log] [testng] 05:07:17,320 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b93d874 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 98 minutes 14 seconds Finished: SUCCESS