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Started by upstream project "BIOFORMATS-test-repo" build number 286 originally caused by: Started by upstream project "Trigger" build number 305 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins762224893842709281.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_45222_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 03:46:57,312 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:46:57,314 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 03:46:57,314 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:46:57,315 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:46:57,315 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:46:57,316 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:46:57,316 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:46:57,316 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:46:57,316 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:46:57,317 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:46:57,317 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:46:57,318 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:46:57,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:46:57,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:46:57,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:46:57,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:46:57,518 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:46:57,518 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:46:57,518 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:46:57,519 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:46:57,519 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 03:46:57,519 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 03:46:57,519 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 203 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-10 03:46:57,529] [main] java.version = 11.0.16 [testng] 03:46:57,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:46:57,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:46:57,574 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-10_03-46-57.log] [testng] 03:46:57,576 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-12-10 03:46:57,578] [main] testng.directory = /data [testng] [2024-12-10 03:46:57,578] [main] testng.configDirectory = /config [testng] [2024-12-10 03:46:57,588] [main] testng.multiplier = 1.0 [testng] [2024-12-10 03:46:57,589] [main] testng.in-memory = false [testng] [2024-12-10 03:46:57,589] [main] testng.allow-missing = false [testng] [2024-12-10 03:46:57,589] [main] user.language = en [testng] [2024-12-10 03:46:57,589] [main] user.country = ${user.country} [testng] [2024-12-10 03:46:57,589] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-10 03:52:41,509] [main] ---------------------------------------- [testng] [2024-12-10 03:52:41,509] [main] Total files: 15735 [testng] [2024-12-10 03:52:41,510] [main] Scan time: 343.92 s (21 ms/file) [testng] [2024-12-10 03:52:41,510] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-10 03:58:28,548] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 03:58:28,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:58:28,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:28,551 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-10_03-58-28.log] [testng] 03:58:28,551 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40c5b656 - End of configuration. [testng] [2024-12-10 03:58:30,024] [pool-1-thread-12] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 03:58:30,024 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:58:30,024 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:30,025 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-10_03-58-30.log] [testng] 03:58:30,025 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7925e538 - End of configuration. [testng] [2024-12-10 03:58:31,471] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 03:58:31,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:58:31,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:31,472 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-10_03-58-31.log] [testng] 03:58:31,472 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2765b01b - End of configuration. [testng] [2024-12-10 03:58:33,113] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 03:58:33,113 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:58:33,113 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:33,114 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-10_03-58-33.log] [testng] 03:58:33,114 |-INFO in ch.qos.logback.core.sift.SiftProcessor@719574d4 - End of configuration. [testng] [2024-12-10 03:58:34,709] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] 03:58:34,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:58:34,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:34,709 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-10_03-58-34.log] [testng] 03:58:34,710 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1419be02 - End of configuration. [testng] [2024-12-10 03:58:36,490] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] 03:58:36,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:58:36,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:36,491 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-10_03-58-36.log] [testng] 03:58:36,492 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18e618ae - End of configuration. [testng] [2024-12-10 03:58:38,426] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] 03:58:38,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:58:38,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:38,427 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-10_03-58-38.log] [testng] 03:58:38,427 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7df23a9b - End of configuration. [testng] [2024-12-10 03:58:40,672] [pool-1-thread-6] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 03:58:40,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:58:40,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:40,672 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-10_03-58-40.log] [testng] 03:58:40,673 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b8a33c7 - End of configuration. [testng] [2024-12-10 03:58:42,308] [pool-1-thread-5] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 03:58:42,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:58:42,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:42,309 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-10_03-58-42.log] [testng] 03:58:42,309 |-INFO in ch.qos.logback.core.sift.SiftProcessor@136e2cba - End of configuration. [testng] [2024-12-10 03:58:46,201] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] 03:58:46,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:58:46,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:46,202 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-10_03-58-46.log] [testng] 03:58:46,202 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63c1b5be - End of configuration. [testng] [2024-12-10 03:58:49,188] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] 03:58:49,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:58:49,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:49,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-10_03-58-49.log] [testng] 03:58:49,189 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44740cbc - End of configuration. [testng] [2024-12-10 03:58:51,218] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] 03:58:51,218 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:58:51,218 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:58:51,218 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-10_03-58-51.log] [testng] 03:58:51,219 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dca91d4 - End of configuration. [testng] [2024-12-10 03:59:32,099] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-12-10 03:59:37,050] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-12-10 03:59:39,479] [pool-1-thread-9] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-12-10 03:59:41,965] [pool-1-thread-10] Initializing /data/converted/michel/d.tif: [testng] [2024-12-10 03:59:46,857] [pool-1-thread-6] Initializing /data/scott/Slide133-08.tif: [testng] [2024-12-10 03:59:49,243] [pool-1-thread-12] Initializing /data/converted/nicolas/image.tif: [testng] [2024-12-10 04:00:30,026] [pool-1-thread-12] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-12-10 04:00:35,880] [pool-1-thread-10] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-12-10 04:00:38,129] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-12-10 04:01:05,253] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-12-10 04:01:13,002] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-12-10 04:01:22,027] [pool-1-thread-10] Initializing /data/converted/sebastien/test.tif: [testng] [2024-12-10 04:04:32,317] [pool-1-thread-3] Initializing /data/scott/Slide133-04.tif: [testng] [2024-12-10 04:04:51,393] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-12-10 04:05:20,597] [pool-1-thread-3] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-12-10 04:05:40,936] [pool-1-thread-3] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-12-10 04:09:55,231] [pool-1-thread-3] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-12-10 04:10:01,831] [pool-1-thread-7] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-12-10 04:10:57,408] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-12-10 04:11:04,073] [pool-1-thread-7] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-12-10 04:11:45,929] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-12-10 04:12:03,333] [pool-1-thread-7] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-12-10 04:12:11,838] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-12-10 04:12:30,436] [pool-1-thread-3] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-12-10 04:13:38,387] [pool-1-thread-7] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-12-10 04:14:02,920] [pool-1-thread-6] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-12-10 04:14:18,690] [pool-1-thread-7] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-12-10 04:14:58,484] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-12-10 04:15:30,503] [pool-1-thread-6] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-12-10 04:15:43,600] [pool-1-thread-9] Initializing /data/othmar/mozaic.tif: [testng] [2024-12-10 04:15:56,703] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-12-10 04:16:09,337] [pool-1-thread-4] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-12-10 04:16:31,494] [pool-1-thread-6] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-12-10 04:16:51,644] [pool-1-thread-10] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-12-10 04:16:57,130] [pool-1-thread-4] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-12-10 04:17:59,783] [pool-1-thread-4] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-12-10 04:18:08,375] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-12-10 04:19:00,633] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-12-10 04:19:22,204] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-12-10 04:19:26,455] [pool-1-thread-3] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-12-10 04:20:09,921] [pool-1-thread-3] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-12-10 04:22:24,590] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-12-10 04:22:27,938] [pool-1-thread-9] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-12-10 04:25:32,781] [pool-1-thread-1] Initializing /data/converted/michel/e.tif: [testng] [2024-12-10 04:27:21,625] [pool-1-thread-8] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-12-10 04:27:25,798] [pool-1-thread-3] Initializing /data/converted/michel/b.tif: [testng] [2024-12-10 04:28:01,237] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-12-10 04:28:54,663] [pool-1-thread-3] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-12-10 04:30:52,814] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-12-10 04:32:59,656] [pool-1-thread-2] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-12-10 04:34:48,907] [pool-1-thread-2] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-12-10 04:35:48,368] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-12-10 04:36:01,695] [pool-1-thread-2] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-12-10 04:37:20,426] [pool-1-thread-4] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-12-10 04:39:32,165] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-12-10 04:40:19,394] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-12-10 04:40:52,952] [pool-1-thread-11] Initializing /data/converted/dietmar/138.tif: [testng] [2024-12-10 04:43:19,949] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-12-10 04:44:46,456] [pool-1-thread-8] Initializing /data/scott/Slide133-11.tif: [testng] [2024-12-10 04:45:48,066] [pool-1-thread-8] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-12-10 04:46:50,163] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-12-10 04:47:13,551] [pool-1-thread-4] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-12-10 04:49:46,202] [pool-1-thread-3] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-12-10 04:55:13,212] [pool-1-thread-10] Initializing /data/converted/michel/a.tif: [testng] [2024-12-10 04:56:15,848] [pool-1-thread-10] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-12-10 04:58:52,996] [pool-1-thread-3] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-12-10 04:59:05,953] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-12-10 04:59:24,285] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-12-10 05:00:09,369] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-12-10 05:00:28,234] [pool-1-thread-12] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] 05:06:38,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 05:06:38,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:06:38,966 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-10_05-06-38.log] [testng] 05:06:38,967 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fa5e8b3 - End of configuration. [testng] [2024-12-10 05:09:40,463] [pool-1-thread-12] Initializing /data/converted/converted/damian.tif: [testng] [2024-12-10 05:10:32,011] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-12-10 05:12:20,695] [pool-1-thread-4] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-12-10 05:12:24,941] [pool-1-thread-3] Initializing /data/converted/converted/2chz.tif: [testng] [2024-12-10 05:13:51,501] [pool-1-thread-7] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-12-10 05:14:09,474] [pool-1-thread-5] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-12-10 05:14:51,877] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-12-10 05:16:35,212] [pool-1-thread-11] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-12-10 05:16:39,055] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-12-10 05:17:32,705] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-12-10 05:17:36,586] [pool-1-thread-11] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-12-10 05:18:04,228] [pool-1-thread-4] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-12-10 05:18:51,095] [pool-1-thread-1] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-12-10 05:19:18,056] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-12-10 05:19:22,035] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-12-10 05:20:18,890] [pool-1-thread-4] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-12-10 05:23:11,332] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-12-10 05:24:17,483] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-12-10 05:26:30,832] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-12-10 05:29:20,435] [pool-1-thread-10] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-12-10 05:30:20,907] [pool-1-thread-12] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-12-10 05:30:25,022] [pool-1-thread-7] Initializing /data/converted/michel/c.tif: [testng] [2024-12-10 05:31:08,655] [pool-1-thread-2] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-12-10 05:31:49,497] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-12-10 05:32:31,945] [pool-1-thread-2] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-12-10 05:35:42,150] [pool-1-thread-11] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-12-10 05:35:57,118] [pool-1-thread-3] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-12-10 05:36:39,459] [pool-1-thread-2] Initializing /data/scott/Slide133-01.tif: [testng] [2024-12-10 05:37:09,432] [pool-1-thread-3] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-12-10 05:37:29,536] [pool-1-thread-2] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-12-10 05:38:22,888] [pool-1-thread-1] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-12-10 05:38:29,913] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-12-10 05:39:22,581] [pool-1-thread-12] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-12-10 05:40:35,382] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-12-10 05:42:58,761] [pool-1-thread-1] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-12-10 05:43:51,561] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-12-10 05:44:29,579] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-12-10 05:46:53,256] [pool-1-thread-7] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-12-10 05:58:23,513] [pool-1-thread-8] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-12-10 05:59:06,667] [pool-1-thread-3] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-12-10 05:59:18,288] [pool-1-thread-8] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-12-10 05:59:56,556] [pool-1-thread-3] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-12-10 06:01:15,888] [pool-1-thread-2] Initializing /data/converted/stephan/notok2.tif: [testng] 06:15:13,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 06:15:13,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:15:13,692 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-10_06-15-13.log] [testng] 06:15:13,693 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b7b2c9a - End of configuration. [testng] 07:02:46,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 07:02:46,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:02:46,706 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-10_07-02-46.log] [testng] 07:02:46,707 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2892f117 - End of configuration. [testng] 07:07:50,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 07:07:50,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:07:50,701 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-10_07-07-50.log] [testng] 07:07:50,701 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d0ea3a9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 200 minutes 58 seconds Finished: SUCCESS