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Started by upstream project "BIOFORMATS-test-repo" build number 287
originally caused by:
 Started by upstream project "Trigger" build number 306
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins5130480775279089371.sh
+ '[' canon = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_45301_merge_ci -v /uod/idr/repos/curated/canon:/data -v /uod/idr-scratch/merge-ci/curated/canon:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 00:55:04,855 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 00:55:04,856 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
   [testng] 00:55:04,856 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 00:55:04,857 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 00:55:04,858 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 00:55:04,858 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 00:55:04,858 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 00:55:04,858 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 00:55:04,859 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 00:55:04,859 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 00:55:04,860 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 00:55:04,860 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 00:55:05,023 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 00:55:05,023 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 00:55:05,046 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 00:55:05,046 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 00:55:05,052 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 00:55:05,052 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 00:55:05,053 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 00:55:05,053 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 00:55:05,053 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
   [testng] 00:55:05,054 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
   [testng] 00:55:05,054 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 195 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-12-11 00:55:05,063] [main] java.version = 17.0.2
   [testng] 00:55:05,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 00:55:05,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:05,106 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-11_00-55-05.log]
   [testng] 00:55:05,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
   [testng] [2024-12-11 00:55:05,110] [main] testng.directory = /data
   [testng] [2024-12-11 00:55:05,110] [main] testng.configDirectory = /config
   [testng] [2024-12-11 00:55:05,119] [main] testng.multiplier = 1.0
   [testng] [2024-12-11 00:55:05,120] [main] testng.in-memory = false
   [testng] [2024-12-11 00:55:05,120] [main] testng.allow-missing = false
   [testng] [2024-12-11 00:55:05,120] [main] user.language = en
   [testng] [2024-12-11 00:55:05,120] [main] user.country = ${user.country}
   [testng] [2024-12-11 00:55:05,120] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-12-11 00:55:17,807] [main] ----------------------------------------
   [testng] [2024-12-11 00:55:17,808] [main] Total files: 13
   [testng] [2024-12-11 00:55:17,808] [main] Scan time: 12.687 s (975 ms/file)
   [testng] [2024-12-11 00:55:17,808] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-12-11 00:55:36,638] [pool-1-thread-1] Initializing /data/cls/_N5Y0001.CR2: 
   [testng] 00:55:36,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 00:55:36,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:36,641 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-11_00-55-36.log]
   [testng] 00:55:36,641 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73adc2b8 - End of configuration.
   [testng] [2024-12-11 00:55:38,346] [pool-1-thread-12] Initializing /data/pete/DNG-CR2.CR2: 
   [testng] 00:55:38,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 00:55:38,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:38,347 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-11_00-55-38.log]
   [testng] 00:55:38,347 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39f8492d - End of configuration.
   [testng] [2024-12-11 00:55:39,453] [pool-1-thread-11] Initializing /data/pete/Raw-CR2.CR2: 
   [testng] 00:55:39,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 00:55:39,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:39,454 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-11_00-55-39.log]
   [testng] 00:55:39,454 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50cfda85 - End of configuration.
   [testng] [2024-12-11 00:55:42,029] [pool-1-thread-10] Initializing /data/pete/Raw-JPG.JPG: 
   [testng] 00:55:42,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 00:55:42,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:42,031 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-11_00-55-42.log]
   [testng] 00:55:42,031 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a9bce8 - End of configuration.
   [testng] [2024-12-11 00:55:43,555] [pool-1-thread-9] Initializing /data/pete/Learning to Fly.JPG: 
   [testng] 00:55:43,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 00:55:43,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:43,556 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-11_00-55-43.log]
   [testng] 00:55:43,556 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18d3e947 - End of configuration.
   [testng] [2024-12-11 00:55:43,938] [pool-1-thread-8] Initializing /data/pete/DNG-WAV.WAV: 
   [testng] 00:55:43,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 00:55:43,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:43,940 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-11_00-55-43.log]
   [testng] 00:55:43,940 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8d2fbea - End of configuration.
   [testng] [2024-12-11 00:55:45,405] [pool-1-thread-7] Initializing /data/pete/DNG-CRW.CRW: 
   [testng] 00:55:45,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 00:55:45,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:45,407 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-11_00-55-45.log]
   [testng] 00:55:45,407 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48dfe2db - End of configuration.
   [testng] [2024-12-11 00:55:46,327] [pool-1-thread-6] Initializing /data/kinor/2013_03_08_0808.CR2: 
   [testng] 00:55:46,328 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 00:55:46,328 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:46,329 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-11_00-55-46.log]
   [testng] 00:55:46,329 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64b6fb18 - End of configuration.
   [testng] [2024-12-11 00:55:48,032] [pool-1-thread-5] Initializing /data/pete/DNG-JPG.JPG: 
   [testng] 00:55:48,032 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 00:55:48,032 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:48,033 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-11_00-55-48.log]
   [testng] 00:55:48,033 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32c25ca3 - End of configuration.
   [testng] [2024-12-11 00:55:48,966] [pool-1-thread-4] Initializing /data/pete/DNG-THM.THM: 
   [testng] 00:55:48,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 00:55:48,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:48,967 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-11_00-55-48.log]
   [testng] 00:55:48,967 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b509ad0 - End of configuration.
   [testng] [2024-12-11 00:55:50,478] [pool-1-thread-3] Initializing /data/pete/Raw-CRW.CRW: 
   [testng] 00:55:50,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 00:55:50,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:50,479 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-11_00-55-50.log]
   [testng] 00:55:50,479 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70e72a3 - End of configuration.
   [testng] [2024-12-11 00:55:52,279] [pool-1-thread-2] Initializing /data/pete/Raw-THM.THM: 
   [testng] 00:55:52,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 00:55:52,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:55:52,281 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-11_00-55-52.log]
   [testng] 00:55:52,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@439c9610 - End of configuration.
   [testng] [2024-12-11 00:56:04,190] [pool-1-thread-9] Initializing /data/pete/Raw-WAV.WAV: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 1 minute 17 seconds
Finished: SUCCESS