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Started by upstream project "BIOFORMATS-test-repo" build number 288 originally caused by: Started by upstream project "Trigger" build number 307 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins9349466950501225086.sh + '[' cellsens = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_45542_merge_ci -v /uod/idr/repos/curated/cellsens:/data -v /uod/idr-scratch/merge-ci/curated/cellsens:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 06:28:26,798 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 06:28:26,799 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 06:28:26,799 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 06:28:26,800 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 06:28:26,801 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 06:28:26,801 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 06:28:26,801 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 06:28:26,801 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 06:28:26,802 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 06:28:26,802 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 06:28:26,802 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 06:28:26,803 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 06:28:26,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 06:28:26,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 06:28:26,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 06:28:26,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 06:28:26,978 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 06:28:26,979 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 06:28:26,979 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 06:28:26,979 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 06:28:26,979 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 06:28:26,980 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 06:28:26,980 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 178 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-12 06:28:26,988] [main] java.version = 21 [testng] 06:28:26,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:28:26,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:28:27,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-12_06-28-27.log] [testng] 06:28:27,031 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-12-12 06:28:27,033] [main] testng.directory = /data [testng] [2024-12-12 06:28:27,033] [main] testng.configDirectory = /config [testng] [2024-12-12 06:28:27,041] [main] testng.multiplier = 1.0 [testng] [2024-12-12 06:28:27,041] [main] testng.in-memory = false [testng] [2024-12-12 06:28:27,041] [main] testng.allow-missing = false [testng] [2024-12-12 06:28:27,041] [main] user.language = en [testng] [2024-12-12 06:28:27,042] [main] user.country = ${user.country} [testng] [2024-12-12 06:28:27,042] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-12 06:32:29,491] [main] ---------------------------------------- [testng] [2024-12-12 06:32:29,491] [main] Total files: 134 [testng] [2024-12-12 06:32:29,491] [main] Scan time: 242.449 s (1809 ms/file) [testng] [2024-12-12 06:32:29,492] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 72 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-12 06:42:10,239] [pool-1-thread-1] Initializing /data/gh-3822/image.jp2: [testng] 06:42:10,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 06:42:10,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:42:10,241 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-12_06-42-10.log] [testng] 06:42:10,241 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a87bfc3 - End of configuration. [testng] [2024-12-12 06:42:23,067] [pool-1-thread-12] Initializing /data/samples/Channels/svens cells - DIC.tif: [testng] 06:42:23,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 06:42:23,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:42:23,068 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-12_06-42-23.log] [testng] 06:42:23,068 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c7acb0f - End of configuration. [testng] [2024-12-12 06:42:34,320] [pool-1-thread-11] Initializing /data/samples/Measurement & ROI/Bandy Snake.tif: [testng] 06:42:34,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 06:42:34,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:42:34,321 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-12_06-42-34.log] [testng] 06:42:34,321 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c00dd3f - End of configuration. [testng] [2024-12-12 06:42:48,247] [pool-1-thread-10] Initializing /data/samples/Fluorescence/drehung.avi: [testng] 06:42:48,248 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 06:42:48,248 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:42:48,248 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-12_06-42-48.log] [testng] 06:42:48,249 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f59e32 - End of configuration. [testng] [2024-12-12 06:42:51,984] [pool-1-thread-9] Initializing /data/anda/Image_01_V76 K2 11_lung.thumbnail.jpg: [testng] 06:42:51,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 06:42:51,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:42:51,985 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-12_06-42-51.log] [testng] 06:42:51,985 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a268373 - End of configuration. [testng] [2024-12-12 06:42:54,186] [pool-1-thread-8] Initializing /data/samples/Count & Measure/color dots.tif: [testng] 06:42:54,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 06:42:54,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:42:54,187 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-12_06-42-54.log] [testng] 06:42:54,187 |-INFO in ch.qos.logback.core.sift.SiftProcessor@111ea241 - End of configuration. [testng] [2024-12-12 06:43:14,435] [pool-1-thread-7] Initializing /data/olivier/14-09-2012/Image_07.vsi: [testng] 06:43:14,435 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 06:43:14,435 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:43:14,435 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-12_06-43-14.log] [testng] 06:43:14,436 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c2005ba - End of configuration. [testng] [2024-12-12 06:43:21,292] [pool-1-thread-6] Initializing /data/samples/Channels/svens cells - red.tif: [testng] 06:43:21,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 06:43:21,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:43:21,293 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-12_06-43-21.log] [testng] 06:43:21,293 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1276c42d - End of configuration. [testng] [2024-12-12 06:43:45,365] [pool-1-thread-5] Initializing /data/david/Image_normal_skin with hair/Image_normal_skin with hair.vsi: [testng] 06:43:45,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 06:43:45,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:43:45,366 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-12_06-43-45.log] [testng] 06:43:45,367 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b7d9443 - End of configuration. [testng] [2024-12-12 06:43:48,333] [pool-1-thread-4] Initializing /data/samples/Channels/svens cells - green.tif: [testng] 06:43:48,333 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 06:43:48,333 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:43:48,334 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-12_06-43-48.log] [testng] 06:43:48,334 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22bfa22d - End of configuration. [testng] [2024-12-12 06:43:55,905] [pool-1-thread-3] Initializing /data/samples/Image SHOW/HER2_FISH Assay.tif: [testng] 06:43:55,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 06:43:55,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:43:55,905 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-12_06-43-55.log] [testng] 06:43:55,906 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c6aeb08 - End of configuration. [testng] [2024-12-12 06:44:03,919] [pool-1-thread-2] Initializing /data/public/evident/Image_V4.1_FL_2D.vsi: [testng] 06:44:03,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 06:44:03,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:44:03,920 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-12_06-44-03.log] [testng] 06:44:03,920 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49a123d1 - End of configuration. [testng] [2024-12-12 06:44:39,533] [pool-1-thread-10] Initializing /data/samples/Deconvolution/Silver birch raw.vsi: [testng] [2024-12-12 06:44:56,354] [pool-1-thread-9] Initializing /data/samples/Fluorescence Unmixing/HeLa_original.tif: [testng] [2024-12-12 06:45:28,965] [pool-1-thread-10] Initializing /data/samples/Deconvolution/_islets_40X_2_/_islets_40X_2_/stack1/frame_t_0.ets: [testng] [2024-12-12 06:45:33,519] [pool-1-thread-4] Initializing /data/olivier/26-10-2014/Image_27_2.vsi: [testng] [2024-12-12 06:45:40,227] [pool-1-thread-6] Initializing /data/public/evident/Image_V4.1_BF.vsi: [testng] [2024-12-12 06:45:46,845] [pool-1-thread-12] Initializing /data/brian/Image_28.vsi: [testng] [2024-12-12 06:45:52,319] [pool-1-thread-3] Initializing /data/samples/Count & Measure/slide IHC.tif: [testng] [2024-12-12 06:46:05,713] [pool-1-thread-11] Initializing /data/robert/Lung_Mite.vsi: [testng] [2024-12-12 06:46:11,024] [pool-1-thread-8] Initializing /data/anthony/11R1398A1.vsi: [testng] [2024-12-12 06:46:19,554] [pool-1-thread-1] Initializing /data/olivier/small-tiles/esgTS-+;Sox21a[6]-+_30D25_09.vsi: [testng] [2024-12-12 06:46:45,349] [pool-1-thread-9] Initializing /data/samples/Count & Measure/Cell Multichannel-z-stack corr..vsi: [testng] [2024-12-12 06:46:55,572] [pool-1-thread-11] Initializing /data/samples/Shading Correction/Micrometer Background.tif: [testng] [2024-12-12 06:47:25,880] [pool-1-thread-10] Initializing /data/samples/Fluorescence Unmixing/HeLa_YFP_only.tif: [testng] [2024-12-12 06:47:44,413] [pool-1-thread-9] Initializing /data/melissa/SW10082402-02_21 - 1 - GOLD copy.vsi: [testng] [2024-12-12 06:47:48,947] [pool-1-thread-3] Initializing /data/gh-3859/Image_Test2.vsi: [testng] [2024-12-12 06:48:22,878] [pool-1-thread-11] Initializing /data/olivier/7262 wt col.vsi: [testng] [2024-12-12 06:48:44,230] [pool-1-thread-10] Initializing /data/olivier/Stress47_02.vsi: [testng] [2024-12-12 06:53:48,940] [pool-1-thread-9] Initializing /data/melissa/artificial-vsi/Image_V4.1_BF.vsi: [testng] [2024-12-12 06:54:07,796] [pool-1-thread-5] Initializing /data/alex/test.vsi: [testng] [2024-12-12 06:54:25,642] [pool-1-thread-5] Initializing /data/samples/Process/Epithelial Cells3.tif: [testng] [2024-12-12 06:54:46,732] [pool-1-thread-5] Initializing /data/public/evident/Image_V4.1_FL_3D.vsi: [testng] [2024-12-12 06:56:04,290] [pool-1-thread-10] Initializing /data/samples/Fluorescence Unmixing/HeLa_GFP_only.tif: [testng] [2024-12-12 06:56:34,353] [pool-1-thread-10] Initializing /data/samples/Count & Measure/Cell Multichannel-z-stack.vsi: [testng] [2024-12-12 06:56:47,711] [pool-1-thread-10] Initializing /data/samples/Measurement & ROI/Intensity t series.vsi: [testng] [2024-12-12 06:56:59,175] [pool-1-thread-12] Initializing /data/samples/Colocalisation/Daisy_Coloc.vsi: [testng] [2024-12-12 06:57:12,514] [pool-1-thread-10] Initializing /data/alex/pN1_new.vsi: [testng] [2024-12-12 06:57:24,495] [pool-1-thread-12] Initializing /data/anda/Image_01_V76 K2 11_lung.vsi: [testng] [2024-12-12 06:58:09,215] [pool-1-thread-3] Initializing /data/samples/Fluorescence/Dako_CISH.vsi: [testng] [2024-12-12 06:58:32,661] [pool-1-thread-3] Initializing /data/olivier/26-10-2014/Image_06.vsi: [testng] [2024-12-12 06:58:36,108] [pool-1-thread-4] Initializing /data/brian/SW10082402-02_21.vsi: [testng] [2024-12-12 06:58:57,880] [pool-1-thread-11] Initializing /data/samples/Measurement & ROI/Cell Multichannel-M&R.tif: [testng] [2024-12-12 06:59:32,358] [pool-1-thread-11] Initializing /data/gh-3822/_image_/stack1/frame_t_0.ets: [testng] [2024-12-12 06:59:42,395] [pool-1-thread-6] Initializing /data/david/smithd_20111115_1.vsi: [testng] [2024-12-12 07:01:02,935] [pool-1-thread-10] Initializing /data/samples/Measurement & ROI/Snake.tif: [testng] [2024-12-12 07:01:30,597] [pool-1-thread-10] Initializing /data/anda/Image_01_V76 K2 11_lung.overview.jpg: [testng] [2024-12-12 07:01:40,653] [pool-1-thread-12] Initializing /data/samples/Fluorescence/Plant FL 100x 29 Z CI Decon2.vsi: [testng] [2024-12-12 07:01:53,038] [pool-1-thread-10] Initializing /data/samples/Measurement & ROI/Oxyuranus_microlepidotus.tif: [testng] [2024-12-12 07:01:57,025] [pool-1-thread-12] Initializing /data/samples/Shading Correction/Micrometer Original.tif: [testng] [2024-12-12 07:02:14,619] [pool-1-thread-10] Initializing /data/gh-3819/H30-18-endo-sost-40x.vsi: [testng] [2024-12-12 07:02:19,878] [pool-1-thread-11] Initializing /data/michelle/FC(26)-19 Gadd45b 1hr_20121011_01.vsi: [testng] [2024-12-12 07:02:22,049] [pool-1-thread-12] Initializing /data/samples/Fluorescence Unmixing/HeLa_unmixed.tif: [testng] [2024-12-12 07:02:36,630] [pool-1-thread-2] Initializing /data/olivier/14-09-2012/Image_01.vsi: [testng] [2024-12-12 07:02:43,824] [pool-1-thread-12] Initializing /data/qa-11394/f1 lateral 25hpf yen4 20X timelapse.vsi: [testng] [2024-12-12 07:02:58,280] [pool-1-thread-4] Initializing /data/brian/BZ cfos1-2_05.vsi: [testng] [2024-12-12 07:03:01,792] [pool-1-thread-12] Initializing /data/samples/Count & Measure/color squares.tif: [testng] [2024-12-12 07:03:05,373] [pool-1-thread-9] Initializing /data/melissa/SW10082402-02_21 - cy2 - cy5 copy.vsi: [testng] [2024-12-12 07:03:08,535] [pool-1-thread-10] Initializing /data/samples/Process/HER2_FISH Assay.tif: [testng] [2024-12-12 07:03:33,349] [pool-1-thread-12] Initializing /data/samples/Deconvolution/_chroma liver 40x 8 planes_/stack1/frame_t_0.ets: [testng] [2024-12-12 07:03:37,951] [pool-1-thread-10] Initializing /data/qa-11039/Image_01.vsi: [testng] [2024-12-12 07:03:56,391] [pool-1-thread-7] Initializing /data/olivier/26-10-2014/Image_27.vsi: [testng] [2024-12-12 07:03:58,414] [pool-1-thread-12] Initializing /data/samples/Deconvolution/Gut section raw.vsi: [testng] [2024-12-12 07:04:12,767] [pool-1-thread-12] Initializing /data/qa-18870/Image_T30.vsi: [testng] [2024-12-12 07:05:22,966] [pool-1-thread-5] Initializing /data/samples/Deconvolution/Skin 2.tif: [testng] [2024-12-12 07:05:57,477] [pool-1-thread-5] Initializing /data/samples/Image SHOW/Layer&Channels.tif: [testng] [2024-12-12 07:06:27,460] [pool-1-thread-4] Initializing /data/qa-29751/VSI-import-example-file.vsi: [testng] [2024-12-12 07:06:31,457] [pool-1-thread-5] Initializing /data/samples/Channels/Composite.vsi: [testng] [2024-12-12 07:06:43,144] [pool-1-thread-5] Initializing /data/samples/Measurement & ROI/Brown snake.tif: [testng] [2024-12-12 07:06:53,876] [pool-1-thread-3] Initializing /data/johannes/PSF_green_1.vsi: [testng] [2024-12-12 07:07:01,170] [pool-1-thread-6] Initializing /data/olivier/Image_06.vsi: [testng] [2024-12-12 07:07:13,379] [pool-1-thread-5] Initializing /data/samples/Channels/svens cells - blue.tif: [testng] 07:53:31,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 07:53:31,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:31,559 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-12_07-53-31.log] [testng] 07:53:31,559 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18d610e1 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 3816, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 85 minutes 8 seconds Finished: SUCCESS