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Started by upstream project "BIOFORMATS-test-repo" build number 289 originally caused by: Started by upstream project "Trigger" build number 308 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins13248436823731800794.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_45627_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:00:31,176 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:00:31,178 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 01:00:31,178 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:00:31,179 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:00:31,179 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:00:31,179 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:00:31,179 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:00:31,179 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:00:31,180 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:00:31,180 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:00:31,180 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:00:31,180 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:00:31,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:00:31,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:00:31,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:00:31,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:00:31,474 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:00:31,474 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:00:31,474 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:00:31,474 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:00:31,474 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 01:00:31,475 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 01:00:31,475 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 295 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-13 01:00:31,485] [main] java.version = 1.8.0_342 [testng] 01:00:31,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:00:31,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:00:31,535 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-13_01-00-31.log] [testng] 01:00:31,537 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-13 01:00:31,539] [main] testng.directory = /data [testng] [2024-12-13 01:00:31,539] [main] testng.configDirectory = /config [testng] [2024-12-13 01:00:31,551] [main] testng.multiplier = 1.0 [testng] [2024-12-13 01:00:31,552] [main] testng.in-memory = false [testng] [2024-12-13 01:00:31,552] [main] testng.allow-missing = false [testng] [2024-12-13 01:00:31,552] [main] user.language = en [testng] [2024-12-13 01:00:31,552] [main] user.country = ${user.country} [testng] [2024-12-13 01:00:31,552] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-13 01:01:48,263] [main] ---------------------------------------- [testng] [2024-12-13 01:01:48,263] [main] Total files: 259 [testng] [2024-12-13 01:01:48,264] [main] Scan time: 76.711 s (296 ms/file) [testng] [2024-12-13 01:01:48,264] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-13 01:23:42,049] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 01:23:42,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:42,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-13_01-23-42.log] [testng] 01:23:42,051 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22a67ec7 - End of configuration. [testng] [2024-12-13 01:23:47,471] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] 01:23:47,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:47,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:47,472 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-13_01-23-47.log] [testng] 01:23:47,472 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1478e3d1 - End of configuration. [testng] [2024-12-13 01:23:48,730] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 01:23:48,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:48,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:48,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-13_01-23-48.log] [testng] 01:23:48,731 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b6f0e53 - End of configuration. [testng] [2024-12-13 01:24:04,674] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] 01:24:04,674 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:24:04,674 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:04,675 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-13_01-24-04.log] [testng] 01:24:04,675 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cc64dff - End of configuration. [testng] [2024-12-13 01:24:06,306] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] 01:24:06,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:24:06,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:06,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-13_01-24-06.log] [testng] 01:24:06,307 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e069031 - End of configuration. [testng] [2024-12-13 01:24:07,588] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 01:24:07,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:24:07,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:07,589 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-13_01-24-07.log] [testng] 01:24:07,589 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e20ec8c - End of configuration. [testng] [2024-12-13 01:24:08,781] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] 01:24:08,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:24:08,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:08,782 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-13_01-24-08.log] [testng] 01:24:08,782 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d31018c - End of configuration. [testng] [2024-12-13 01:24:42,336] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] 01:24:42,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:24:42,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:42,337 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-13_01-24-42.log] [testng] 01:24:42,337 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3877f025 - End of configuration. [testng] [2024-12-13 01:24:43,515] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 01:24:43,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:24:43,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:43,516 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-13_01-24-43.log] [testng] 01:24:43,516 |-INFO in ch.qos.logback.core.sift.SiftProcessor@316bcdc2 - End of configuration. [testng] [2024-12-13 01:24:45,199] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] 01:24:45,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:24:45,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:45,200 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-13_01-24-45.log] [testng] 01:24:45,200 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53278f75 - End of configuration. [testng] [2024-12-13 01:25:10,052] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif: [testng] 01:25:10,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:25:10,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:10,053 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-13_01-25-10.log] [testng] 01:25:10,053 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29faed0a - End of configuration. [testng] [2024-12-13 01:25:12,855] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] 01:25:12,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:25:12,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:12,856 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-13_01-25-12.log] [testng] 01:25:12,856 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20e4947e - End of configuration. [testng] [2024-12-13 01:25:28,135] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-12-13 01:25:28,573] [pool-1-thread-6] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-12-13 01:25:31,265] [pool-1-thread-2] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-12-13 01:25:41,522] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oif: [testng] [2024-12-13 01:25:55,913] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-12-13 01:25:57,662] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2024-12-13 01:26:01,448] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2024-12-13 01:26:04,303] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-12-13 01:26:10,299] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-12-13 01:26:15,975] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-12-13 01:26:23,350] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2024-12-13 01:28:53,022] [pool-1-thread-8] Initializing /data/glen/simulstack.oib: [testng] [2024-12-13 01:28:58,036] [pool-1-thread-12] Initializing /data/molly/11OCT6.OIF: [testng] [2024-12-13 01:29:34,103] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-12-13 01:29:35,653] [pool-1-thread-5] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-12-13 01:29:43,878] [pool-1-thread-8] Initializing /data/glen/singleseqline.oib: [testng] [2024-12-13 01:29:51,057] [pool-1-thread-3] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-12-13 01:29:54,106] [pool-1-thread-6] Initializing /data/monica/Image0056.oif: [testng] [2024-12-13 01:29:57,100] [pool-1-thread-5] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-12-13 01:30:02,779] [pool-1-thread-8] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-12-13 01:30:10,739] [pool-1-thread-5] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-12-13 01:30:24,133] [pool-1-thread-3] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-12-13 01:30:27,806] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-12-13 01:30:39,591] [pool-1-thread-3] Initializing /data/glen/111407.oif: [testng] [2024-12-13 01:30:56,656] [pool-1-thread-8] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-12-13 01:31:29,182] [pool-1-thread-5] Initializing /data/glen/singleseqframe.oif: [testng] [2024-12-13 01:32:33,236] [pool-1-thread-6] Initializing /data/glen/notsaturated.oif: [testng] [2024-12-13 01:33:41,427] [pool-1-thread-5] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-12-13 01:33:53,934] [pool-1-thread-5] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-12-13 01:34:04,976] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-12-13 01:34:15,554] [pool-1-thread-5] Initializing /data/glen/Image0002.oif: [testng] [2024-12-13 01:45:05,578] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oib: [testng] [2024-12-13 01:45:13,351] [pool-1-thread-2] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-12-13 01:45:21,398] [pool-1-thread-2] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-12-13 01:48:10,931] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-12-13 01:48:20,721] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2024-12-13 01:48:45,517] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-12-13 01:49:16,029] [pool-1-thread-6] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-12-13 01:49:19,344] [pool-1-thread-6] Initializing /data/tom/zseries-test.oib: [testng] [2024-12-13 01:49:29,788] [pool-1-thread-6] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-12-13 01:49:39,143] [pool-1-thread-6] Initializing /data/yasunori/series_1.oib: [testng] [2024-12-13 01:49:50,588] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-12-13 01:50:00,531] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-12-13 01:50:10,410] [pool-1-thread-6] Initializing /data/johannes/step2.bmp: [testng] [2024-12-13 01:50:13,824] [pool-1-thread-6] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-12-13 01:50:15,033] [pool-1-thread-1] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-12-13 01:50:24,815] [pool-1-thread-6] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-12-13 01:50:33,452] [pool-1-thread-6] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-12-13 01:52:42,903] [pool-1-thread-2] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-12-13 01:52:51,672] [pool-1-thread-2] Initializing /data/david/Image0016.oif: [testng] [2024-12-13 01:54:51,505] [pool-1-thread-1] Initializing /data/molly/11OCT2.OIF: [testng] [2024-12-13 01:56:03,497] [pool-1-thread-2] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-12-13 01:56:13,825] [pool-1-thread-6] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-12-13 01:56:48,335] [pool-1-thread-6] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-12-13 01:57:46,953] [pool-1-thread-6] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-12-13 01:57:56,243] [pool-1-thread-6] Initializing /data/brian/lambda02nm.oib: [testng] [2024-12-13 01:58:05,488] [pool-1-thread-6] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-12-13 01:58:17,243] [pool-1-thread-6] Initializing /data/karl/Image0009.oib: [testng] [2024-12-13 01:58:25,617] [pool-1-thread-6] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-12-13 01:58:35,830] [pool-1-thread-6] Initializing /data/glen/4205basal106072.oif: [testng] [2024-12-13 01:59:08,245] [pool-1-thread-3] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-12-13 01:59:16,954] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oib: [testng] [2024-12-13 01:59:27,634] [pool-1-thread-3] Initializing /data/glen/singlesimul.oib: [testng] [2024-12-13 01:59:36,329] [pool-1-thread-3] Initializing /data/molly/11OCT9.OIF: [testng] [2024-12-13 02:00:56,621] [pool-1-thread-2] Initializing /data/aryeh/1h.oib: [testng] [2024-12-13 02:01:16,342] [pool-1-thread-2] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-12-13 02:01:30,495] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-12-13 02:01:43,889] [pool-1-thread-2] Initializing /data/glen/notsaturated.oib: [testng] [2024-12-13 02:01:54,923] [pool-1-thread-2] Initializing /data/brian/FLIP.oib: [testng] [2024-12-13 02:02:11,133] [pool-1-thread-2] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-12-13 02:02:30,461] [pool-1-thread-2] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-12-13 02:02:50,010] [pool-1-thread-2] Initializing /data/simon/never_worked.oib: [testng] [2024-12-13 02:03:03,622] [pool-1-thread-2] Initializing /data/johannes/step1.bmp: [testng] [2024-12-13 02:03:08,941] [pool-1-thread-2] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-12-13 02:03:24,302] [pool-1-thread-2] Initializing /data/kay/IM2pg.oib: [testng] [2024-12-13 02:03:51,208] [pool-1-thread-2] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-12-13 02:04:15,195] [pool-1-thread-2] Initializing /data/molly/11OCT8.OIF: [testng] [2024-12-13 02:07:41,901] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-12-13 02:07:48,610] [pool-1-thread-7] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-12-13 02:08:01,209] [pool-1-thread-4] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-12-13 02:08:09,066] [pool-1-thread-7] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-12-13 02:08:26,624] [pool-1-thread-4] Initializing /data/glen/singleseqline.oif: [testng] [2024-12-13 02:08:34,560] [pool-1-thread-7] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-12-13 02:08:52,633] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-12-13 02:09:09,329] [pool-1-thread-7] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-12-13 02:09:28,560] [pool-1-thread-7] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-12-13 02:09:50,202] [pool-1-thread-7] Initializing /data/yoshihito/XY.oif: [testng] [2024-12-13 02:11:48,004] [pool-1-thread-5] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-12-13 02:17:17,018] [pool-1-thread-7] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-12-13 02:17:18,880] [pool-1-thread-4] Initializing /data/david/Image0016.oib: [testng] [2024-12-13 02:17:29,421] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-12-13 02:17:32,016] [pool-1-thread-7] Initializing /data/molly/11OCT7.OIF: [testng] [2024-12-13 02:18:20,214] [pool-1-thread-4] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-12-13 02:18:31,230] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-12-13 02:18:53,432] [pool-1-thread-8] Initializing /data/allan/62909#1.oib: [testng] [2024-12-13 02:19:04,828] [pool-1-thread-8] Initializing /data/molly/11OCT11.OIF: [testng] [2024-12-13 02:24:20,346] [pool-1-thread-12] Initializing /data/glen/simulstack.oif: [testng] [2024-12-13 02:25:40,156] [pool-1-thread-9] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-12-13 02:25:51,331] [pool-1-thread-9] Initializing /data/molly/11OCT10.OIF: [testng] [2024-12-13 02:32:00,970] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-12-13 02:32:16,059] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2024-12-13 02:33:16,457] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-12-13 02:33:28,580] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2024-12-13 02:34:02,815] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-12-13 02:36:43,857] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-12-13 02:44:08,766] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-12-13 02:44:19,824] [pool-1-thread-4] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-12-13 02:44:31,974] [pool-1-thread-4] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-12-13 02:44:46,307] [pool-1-thread-4] Initializing /data/tom/RGB-1.avi: [testng] [2024-12-13 02:44:54,387] [pool-1-thread-4] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-12-13 02:45:09,648] [pool-1-thread-4] Initializing /data/brian/Kaede15.oib: [testng] [2024-12-13 02:45:22,457] [pool-1-thread-4] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-12-13 02:55:37,392] [pool-1-thread-12] Initializing /data/glen/Null file/test change.oif: [testng] [2024-12-13 02:56:43,007] [pool-1-thread-12] Initializing /data/yoshihito/XY.oib: [testng] [2024-12-13 02:56:51,011] [pool-1-thread-12] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-12-13 02:57:16,526] [pool-1-thread-2] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-12-13 02:57:24,754] [pool-1-thread-2] Initializing /data/johannes/step4.bmp: [testng] [2024-12-13 02:57:28,395] [pool-1-thread-2] Initializing /data/johannes/step4b.bmp: [testng] [2024-12-13 02:57:32,065] [pool-1-thread-2] Initializing /data/simon/used_to_work.oib: [testng] [2024-12-13 02:57:42,399] [pool-1-thread-2] Initializing /data/johannes/step3.bmp: [testng] [2024-12-13 02:57:45,843] [pool-1-thread-2] Initializing /data/chris/missegragation-15.oib: [testng] [2024-12-13 02:57:54,529] [pool-1-thread-2] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-12-13 02:58:13,657] [pool-1-thread-2] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-12-13 02:58:26,354] [pool-1-thread-2] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-12-13 02:58:36,294] [pool-1-thread-2] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-12-13 03:00:33,755] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-12-13 03:00:43,733] [pool-1-thread-7] Initializing /data/jae/Image0001.oib: [testng] [2024-12-13 03:00:45,984] [pool-1-thread-6] Initializing /data/glen/singlesimul.oif: [testng] [2024-12-13 03:00:55,096] [pool-1-thread-7] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-12-13 03:02:59,251] [pool-1-thread-6] Initializing /data/marc/V0606L.oib: [testng] [2024-12-13 03:03:31,093] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-12-13 03:03:49,850] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 03:12:36,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:12:36,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:12:36,966 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-13_03-12-36.log] [testng] 03:12:36,966 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50c928f3 - End of configuration. [testng] 03:17:43,069 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:17:43,069 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:17:43,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-13_03-17-43.log] [testng] 03:17:43,072 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ae084cf - End of configuration. [testng] 04:13:36,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:13:36,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:13:36,199 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-13_04-13-36.log] [testng] 04:13:36,199 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c7eed80 - End of configuration. [testng] 05:20:27,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 05:20:27,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:20:27,538 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-13_05-20-27.log] [testng] 05:20:27,538 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e416c1 - End of configuration. [testng] 05:35:40,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 05:35:40,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:35:40,691 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-13_05-35-40.log] [testng] 05:35:40,691 |-INFO in ch.qos.logback.core.sift.SiftProcessor@307243f3 - End of configuration. [testng] 05:54:01,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:54:01,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:54:01,678 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-13_05-54-01.log] [testng] 05:54:01,679 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3212ff1b - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 293 minutes 35 seconds Finished: SUCCESS